mRNA_D-mesarthrocarpus_Contig10909.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10909.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10909.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10909.1.1 vs. uniprot
Match: A0A090CXT2_9BACT (Putative secreted protein n=1 Tax=Criblamydia sequanensis CRIB-18 TaxID=1437425 RepID=A0A090CXT2_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 2.060e-5
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1 
Query:    1 VVFVDAFDVLFLPSLPLLPLRFTTMRTDLVFGAEVSCAPDRGLAPLYPEALRGSRVFLNSGTYAGRASDV 210
            V+FVDA+DV+FL +  ++  +F +  +  V  AE +C P + LA  YPE+    + +LNSGTY G A  +
Sbjct:   84 VLFVDAYDVIFLANENVIKDKFYSFNSPFVISAETNCFPFQELASAYPESPTLFK-YLNSGTYMGYAGYI 152
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10909.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A090CXT2_9BACT2.060e-540.00Putative secreted protein n=1 Tax=Criblamydia sequ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10909contigD-mesarthrocarpus_Contig10909:205..420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog132113.XP_003492923.1
Preferred namePLOD1
PFAMs2OG-FeII_Oxy
Model size216
Max annot lvl33208|Metazoa
KEGG rclassRC00005,RC00049,RC00397,RC00709
KEGG koko:K00473,ko:K13645,ko:K13646,ko:K13647,ko:K15174
KEGG ReactionR03376,R03380,R04491
KEGG Pathwayko00310,ko00514,ko04011,map00310,map00514,map04011
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001666,GO:0001701,GO:0001885,GO:0001886,GO:0002009,GO:0002064,GO:0003006,GO:0003008,GO:0003013,GO:0003018,GO:0003158,GO:0003382,GO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005794,GO:0005802,GO:0006011,GO:0006082,GO:0006139,GO:0006464,GO:0006486,GO:0006493,GO:0006520,GO:0006575,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007295,GO:0007399,GO:0008015,GO:0008104,GO:0008150,GO:0008152,GO:0008194,GO:0008198,GO:0008378,GO:0008475,GO:0008544,GO:0008652,GO:0009058,GO:0009059,GO:0009066,GO:0009067,GO:0009100,GO:0009101,GO:0009225,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0016020,GO:0016043,GO:0016053,GO:0016491,GO:0016705,GO:0016706,GO:0016740,GO:0016757,GO:0016758,GO:0017185,GO:0018126,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0019842,GO:0019953,GO:0021915,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030198,GO:0030199,GO:0030246,GO:0030323,GO:0030324,GO:0030855,GO:0030867,GO:0031012,GO:0031090,GO:0031406,GO:0031418,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032963,GO:0032964,GO:0032989,GO:0032991,GO:0033036,GO:0033218,GO:0033823,GO:0034641,GO:0034645,GO:0035150,GO:0035250,GO:0035251,GO:0035295,GO:0035296,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042175,GO:0042221,GO:0042277,GO:0042311,GO:0042398,GO:0042802,GO:0042803,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045446,GO:0046394,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0046946,GO:0046947,GO:0046983,GO:0048029,GO:0048037,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048589,GO:0048609,GO:0048729,GO:0048730,GO:0048731,GO:0048856,GO:0048869,GO:0050211,GO:0050662,GO:0050880,GO:0050896,GO:0051179,GO:0051213,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060425,GO:0060429,GO:0060541,GO:0062023,GO:0065007,GO:0065008,GO:0070085,GO:0070482,GO:0070815,GO:0070831,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0071711,GO:0071840,GO:0090066,GO:0097359,GO:0097435,GO:0097746,GO:0097755,GO:0098588,GO:0098791,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494
Exons1
Evalue2.61e-10
EggNOG OGsKOG1971@1|root,KOG1971@2759|Eukaryota,38DIW@33154|Opisthokonta,3BCUS@33208|Metazoa,3CS3C@33213|Bilateria,41TBU@6656|Arthropoda,3SHZJ@50557|Insecta,46GA8@7399|Hymenoptera
EC1.14.11.4,2.4.1.50,2.4.1.66
DescriptionProlyl 4-hydroxylase alpha subunit homologues.
Cds size216
COG categoryO
BRITEko00000,ko00001,ko01000,ko01003,ko03021,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789222.0382178-CDS-D-mesarthrocarpus_Contig10909:204..4201680789222.0382178-CDS-D-mesarthrocarpus_Contig10909:204..420Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10909 205..420 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10909.1.1prot_D-mesarthrocarpus_Contig10909.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10909 205..420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10909.1.1

>prot_D-mesarthrocarpus_Contig10909.1.1 ID=prot_D-mesarthrocarpus_Contig10909.1.1|Name=mRNA_D-mesarthrocarpus_Contig10909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=72bp
VVFVDAFDVLFLPSLPLLPLRFTTMRTDLVFGAEVSCAPDRGLAPLYPEA
LRGSRVFLNSGTYAGRASDVL*
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mRNA from alignment at D-mesarthrocarpus_Contig10909:205..420-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10909.1.1 ID=mRNA_D-mesarthrocarpus_Contig10909.1.1|Name=mRNA_D-mesarthrocarpus_Contig10909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10909:205..420- (Discosporangium mesarthrocarpum MT17_79)
GTGGTGTTCGTGGACGCCTTTGACGTGCTCTTCTTGCCCAGCCTCCCACT
CCTGCCCCTGAGGTTCACCACGATGAGGACGGACCTGGTGTTCGGCGCCG
AGGTCAGCTGTGCGCCGGACCGGGGGCTGGCCCCGCTCTACCCTGAGGCC
CTAAGGGGATCGAGGGTGTTCCTCAACTCAGGGACCTATGCCGGCAGGGC
ATCTGACGTACTGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10909:205..420-

>mRNA_D-mesarthrocarpus_Contig10909.1.1 ID=mRNA_D-mesarthrocarpus_Contig10909.1.1|Name=mRNA_D-mesarthrocarpus_Contig10909.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10909:205..420- (Discosporangium mesarthrocarpum MT17_79)
GTGGTGTTCGTGGACGCCTTTGACGTGCTCTTCTTGCCCAGCCTCCCACT
CCTGCCCCTGAGGTTCACCACGATGAGGACGGACCTGGTGTTCGGCGCCG
AGGTCAGCTGTGCGCCGGACCGGGGGCTGGCCCCGCTCTACCCTGAGGCC
CTAAGGGGATCGAGGGTGTTCCTCAACTCAGGGACCTATGCCGGCAGGGC
ATCTGACGTACTGTGA
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