mRNA_D-mesarthrocarpus_Contig10908.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.930e-20 Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 1
Query: 94 WMKMLREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTS-SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGL-LKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
W ++L +E L DP S A FR FRVPYPFF+ LV V+++ W ++ DA GR+ P + T + ++ ++ MS T +V H+FCE F+ M++ I L + N EL R M Y +LGF GA+GSTDVT+
Sbjct: 65 WAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTH 208
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 4.100e-19 Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 94 WMKMLREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTS-SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGL-LKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
W +ML ++ L D SR + FR FRVPY FF+ LV V+ ++W ++G D AGR + P + T ++ M+ MS T + HKFC+ F+ M++ I L + N EL M+ Y RLGF+GA+GS DVT+
Sbjct: 63 WAQMLEDKDLEDSNSRTSKQFRLDFRVPYSFFLRLVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTH 206
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.220e-17 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 94 WMKM--LREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTS-SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
W ++ LRE D +R A FR FRVPYPFFV LV VR + W + +D GRQA P + S + D++ M+ +S T H+FC+ F+ +++ ++ L + +L++ ME Y R+GF GAVGSTDVT+
Sbjct: 110 WQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYV-YLPTGEDLRKVMEQYDRIGFPGAVGSTDVTH 253
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.840e-17 Identity = 67/206 (32.52%), Postives = 97/206 (47.09%), Query Frame = 1
Query: 79 FRESPWMKMLRE-ESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLG--SSGADAAGRQASPWGRRCYRSFTS--------SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTYFELE*VSSG*H*VVQRQGRLPHSGMRGHRR-PFHACLGGNMRVSGRTQ 660
+R PW +ML + + L DP +R A FRRRFRVPYPFF+ LV EV+ +W G + + GR RRC T DD+ + M E T + HKF E F+ +F W+ + + EL+ M+ Y +G +GA+GS D T+ E + R H G G+ F+ + +MRV T+
Sbjct: 61 YRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGT----RRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRMPNED-ELKDIMKTYDEVGMSGAMGSMDGTHIEWT--------LCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTR 253
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.530e-17 Identity = 54/144 (37.50%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 94 WMKMLREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTS-SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGL-LKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
W +ML ++ L + SR + FR FRVP FF+ LV V+ ++W ++G DAAGRQ+ P + T ++ M+ MS T + H FC+ F+ M++ I L + N EL M+ Y RLGF+GA+GS DVT+
Sbjct: 63 WARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTH 206
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 2.930e-17 Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 79 FRESPWMKMLRE-ESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLG--SSGADAAGRQASPWGRRCYRSFTS--------SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTYFE 525
+R PW +ML + + L DP +R A FRRRFRVPYPFF+ LV EV+ +W G + + GR RRC T DD+ + M E T + HKF E F+ F W+ + + EL+ M+ Y +G +GA+GS D T+ E
Sbjct: 61 YRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGT----RRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFAREFFPVWVRMPNED-ELKDIMKTYDEVGMSGAMGSMDGTHIE 215
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 9.010e-16 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 94 WMKMLREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTS-SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGL-LKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
W +ML ++ L D S + FR FRVP FF+ LV V+ + W +SG DAA RQ+ P + T ++ ++ MS T + HKFC+ F+ M++ I L + N EL M+ Y RLGF+GA+GS DVT+
Sbjct: 36 WAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTH 179
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 3.570e-15 Identity = 64/202 (31.68%), Postives = 93/202 (46.04%), Query Frame = 1
Query: 82 RESPWMKMLRE-ESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLG--SSGADAAGRQASPWGRRCYRSFTS-----SEEKLLDDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTYFELE*VSSG*H*VVQRQGRLPHSGMRGHRR-PFHACLGGNMRVSGRTQ 660
R PW +ML + + L DP +R A FRRRFRVPYPFF+ LV V+ W G ++ + GR RRC DD+ + M E T ++ HKF F+ F W+ + + EL+ M+ Y +G TGA+GS D T+ + V R H G G+ ++ + +MRV T+
Sbjct: 28 RALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGT----RRCIPVEIDVLRILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWVRMPNED-ELKEIMKTYDEVGMTGAMGSMDGTHLQWT--------VCPYSERSSHVGKEGYATLVYNVAVSHDMRVLSCTR 216
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.020e-14 Identity = 59/176 (33.52%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 73 PKFRESPWMKMLRE--ESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADAAGRQASPWGRRCYRSFTSSEEKLL------DDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTYFELE*V-SSG*H*VVQRQG 573
P + S W MLRE ++L DP ++ A LFRRRFR+PYP F+ LV+E++ W G + A+ G R R E K+L DD+ ++ +SE T RV H+F + F+ F + + L+ + Y +GF G GS D T+ + +SG H V ++G
Sbjct: 62 PDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTT------DATDLGGRGTRPCIPVELKVLGRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGA-HLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEG 230
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Match: A0A6H5JP98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP98_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 4.550e-13 Identity = 54/147 (36.73%), Postives = 72/147 (48.98%), Query Frame = 1
Query: 121 LGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSW--LGSSGADAAGRQASPWGRRCYRSFTSSEEKLL------------DDMFFMARMSEGTA*RVLHKFCECFS*HMFETWIGLLKSN*ELQRTMEAYHRLGFTGAVGSTDVTY 519
L DP +R A FRRRFRVPYPFF+ LV EV+ W + + GR RRC E K+L DD+ + M E T + HKF E F+ F W+ + + EL+ M+ Y +G TGA+GS D T+
Sbjct: 75 LQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGKWPVFTTDEFELGGRGT----RRCI----PVEIKVLAVLRILGRGNYFDDVSEVTGMGEATVNHLFHKFTERFAREFFPVWVRM-PNEVELKEIMKTYDEVGMTGAMGSMDGTH 212 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10908.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10908.1.1 >prot_D-mesarthrocarpus_Contig10908.1.1 ID=prot_D-mesarthrocarpus_Contig10908.1.1|Name=mRNA_D-mesarthrocarpus_Contig10908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=90bp MKMLREESLGDPESRGAILFRRRFRVPYPFFVPLVREVRQQSWLGSSGADback to top mRNA from alignment at D-mesarthrocarpus_Contig10908:260..1249- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10908.1.1 ID=mRNA_D-mesarthrocarpus_Contig10908.1.1|Name=mRNA_D-mesarthrocarpus_Contig10908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=990bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10908:260..1249- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10908:260..1249- >mRNA_D-mesarthrocarpus_Contig10908.1.1 ID=mRNA_D-mesarthrocarpus_Contig10908.1.1|Name=mRNA_D-mesarthrocarpus_Contig10908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=270bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10908:260..1249- (Discosporangium mesarthrocarpum MT17_79)back to top |