mRNA_D-mesarthrocarpus_Contig10904.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10904.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10904.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A6P4YRM1_BRABE (Xanthine dehydrogenase/oxidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YRM1_BRABE)

HSP 1 Score: 79.0 bits (193), Expect = 1.750e-15
Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPEGGTNVIG 195
            QV+GEA+YTDD+P L G LY GLVLS + HA+++ +DPSAA    GVE F+S KDVP  G+NV G
Sbjct:  622 QVTGEAVYTDDMPPLQGELYLGLVLSKKAHAKILSIDPSAALQMPGVEMFVSAKDVP--GSNVTG 684
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A6P5ALA6_BRABE (Xanthine dehydrogenase/oxidase n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5ALA6_BRABE)

HSP 1 Score: 75.9 bits (185), Expect = 2.120e-14
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPEGGTNVIG 195
            QV+GEA+YTDD+P L G LY GLVLS + HA+++ +DPSAA    GVE F+  +DVP  G+N+ G
Sbjct:  634 QVTGEAVYTDDMPPLQGELYVGLVLSKKAHAKILSIDPSAALQMPGVEMFVGAEDVP--GSNITG 696
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: C3XZ64_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XZ64_BRAFL)

HSP 1 Score: 74.7 bits (182), Expect = 5.400e-14
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPEGGTNVIG 195
            QV+GEA+YTDD+P + G LY GLVLS + HA+++ +DPS A    GVE F+S +DVP  G+N+ G
Sbjct:  545 QVTGEAVYTDDMPRIQGELYLGLVLSKKAHAKIVSIDPSEALKMAGVEMFVSAEDVP--GSNITG 607
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A6H5JRC2_9PHAE (Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.550e-13
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDV 168
            QV+GEA+YTDD+P+  GTL+ GLVLS +PHA+L++VDPS A   EGV RF+   DV
Sbjct:  739 QVTGEAVYTDDMPSPVGTLFVGLVLSTKPHAKLLEVDPSPALEVEGVLRFVGAGDV 794
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A0C9R8J0_9HYME (XDH_0 protein n=2 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9R8J0_9HYME)

HSP 1 Score: 72.8 bits (177), Expect = 2.570e-13
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPE 174
            Q +GEA+Y DDIP+  G LY  LVLS RPHA++I++D S A   EGV RF S KD+PE
Sbjct:  541 QTTGEAIYCDDIPSTAGELYLALVLSTRPHAKIIKIDASTALELEGVIRFFSAKDIPE 598
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: UPI0006C9DED1 (xanthine dehydrogenase-like n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C9DED1)

HSP 1 Score: 72.8 bits (177), Expect = 2.570e-13
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPE 174
            Q +GEA+Y DDIP + G LY   VLS + HA++I VDPSAA A EGVE F+  KD+PE
Sbjct:  622 QAAGEAIYLDDIPKISGELYLAFVLSTKTHAKIINVDPSAALAMEGVEAFVDSKDIPE 679
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A336MDC5_CULSO (Xanthine dehydrogenase n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MDC5_CULSO)

HSP 1 Score: 72.4 bits (176), Expect = 3.510e-13
Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPEGGTNVIG 195
            QV+GEA+Y DDIP +   LY G VLS + HA++I VDPS A    GVE F S KD+ + G N +G
Sbjct:  596 QVTGEAIYLDDIPRMENELYVGFVLSTKAHAKIINVDPSEALKQPGVEAFFSAKDIKDRGRNQVG 660
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: UPI000A0EE546 (xanthine dehydrogenase isoform X1 n=3 Tax=Athalia rosae TaxID=37344 RepID=UPI000A0EE546)

HSP 1 Score: 72.4 bits (176), Expect = 3.520e-13
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPE 174
            QV+GEA+Y DD+P   G LY  LVLS R HAR+I +D SAA A EGV+ F S KD+PE
Sbjct:  670 QVTGEAVYCDDMPKFVGELYLALVLSTRAHARIINIDASAALALEGVKAFYSAKDIPE 727
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: UPI0018D9F2EA (xanthine dehydrogenase/oxidase-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9F2EA)

HSP 1 Score: 71.6 bits (174), Expect = 6.560e-13
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPEGGTNVIG 195
            QV+GEA+Y DDIP++ G  Y G+VLS + HA++I VD +AA A  GV  F+ +KDVP  G+N +G
Sbjct:  595 QVTGEAVYVDDIPSITGEFYLGVVLSKKAHAKIISVDSTAAVALTGVHSFVDMKDVP--GSNAVG 657
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BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Match: A0A6V7JZ05_9HYME (Ald_Xan_dh_C domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JZ05_9HYME)

HSP 1 Score: 70.9 bits (172), Expect = 1.190e-12
Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1 
Query:    1 QVSGEAMYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDVPE 174
            QV+GEA+Y DDIP + G LY  L+L++R HA+++++DPS A   EGV +F S KD+PE
Sbjct:   19 QVTGEAIYCDDIPRINGELYLALILTSRSHAKILKIDPSKALKMEGVVKFYSAKDIPE 76
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10904.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P4YRM1_BRABE1.750e-1560.00Xanthine dehydrogenase/oxidase n=1 Tax=Branchiosto... [more]
A0A6P5ALA6_BRABE2.120e-1455.38Xanthine dehydrogenase/oxidase n=3 Tax=Branchiosto... [more]
C3XZ64_BRAFL5.400e-1453.85Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A6H5JRC2_9PHAE2.550e-1360.71Xanthine dehydrogenase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A0C9R8J0_9HYME2.570e-1358.62XDH_0 protein n=2 Tax=Fopius arisanus TaxID=64838 ... [more]
UPI0006C9DED12.570e-1358.62xanthine dehydrogenase-like n=1 Tax=Copidosoma flo... [more]
A0A336MDC5_CULSO3.510e-1352.31Xanthine dehydrogenase n=2 Tax=Culicoides sonorens... [more]
UPI000A0EE5463.520e-1360.34xanthine dehydrogenase isoform X1 n=3 Tax=Athalia ... [more]
UPI0018D9F2EA6.560e-1352.31xanthine dehydrogenase/oxidase-like n=1 Tax=Patiri... [more]
A0A6V7JZ05_9HYME1.190e-1253.45Ald_Xan_dh_C domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10904contigD-mesarthrocarpus_Contig10904:31..246 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7425.NV11547-PA
Preferred nameXDH
PFAMsAld_Xan_dh_C,Ald_Xan_dh_C2,CO_deh_flav_C,FAD_binding_5,Fer2,Fer2_2
Model size216
Max annot lvl33208|Metazoa
KEGG rclassRC00075,RC00080,RC00143,RC00218,RC00242,RC01073,RC01074,RC02017,RC02199
KEGG koko:K00106,ko:K00157
KEGG ReactionR01709,R01768,R01769,R02103,R02107,R02125,R02657,R03871,R04085,R04904,R07942,R07977,R07978,R07979,R08235,R08349,R08384,R08408
KEGG Pathwayko00230,ko00232,ko00280,ko00350,ko00380,ko00750,ko00760,ko00830,ko00982,ko00983,ko01100,ko01110,ko01120,ko04146,ko04630,map00230,map00232,map00280,map00350,map00380,map00750,map00760,map00830,map00982,map00983,map01100,map01110,map01120,map04146,map04630
KEGG ModuleM00546
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000302,GO:0001932,GO:0001933,GO:0001934,GO:0001936,GO:0001937,GO:0002197,GO:0002237,GO:0003674,GO:0003824,GO:0004031,GO:0004854,GO:0004855,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005783,GO:0005829,GO:0006082,GO:0006091,GO:0006139,GO:0006144,GO:0006145,GO:0006150,GO:0006163,GO:0006195,GO:0006206,GO:0006520,GO:0006525,GO:0006568,GO:0006576,GO:0006586,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006805,GO:0006807,GO:0006810,GO:0006919,GO:0006950,GO:0006979,GO:0007275,GO:0007568,GO:0007589,GO:0007595,GO:0008150,GO:0008152,GO:0008285,GO:0008340,GO:0009055,GO:0009056,GO:0009058,GO:0009064,GO:0009072,GO:0009112,GO:0009114,GO:0009115,GO:0009117,GO:0009166,GO:0009266,GO:0009308,GO:0009408,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009636,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010044,GO:0010259,GO:0010468,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0016491,GO:0016528,GO:0016529,GO:0016623,GO:0016661,GO:0016662,GO:0016725,GO:0016726,GO:0016727,GO:0016903,GO:0017144,GO:0018130,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019752,GO:0022603,GO:0022900,GO:0023051,GO:0023056,GO:0023057,GO:0030151,GO:0030162,GO:0030856,GO:0030857,GO:0030879,GO:0031323,GO:0031324,GO:0031325,GO:0031399,GO:0031400,GO:0031401,GO:0032268,GO:0032269,GO:0032270,GO:0032496,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0032991,GO:0033993,GO:0034097,GO:0034404,GO:0034418,GO:0034465,GO:0034612,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042430,GO:0042493,GO:0042542,GO:0042579,GO:0042802,GO:0042803,GO:0042816,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043167,GO:0043168,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043280,GO:0043281,GO:0043408,GO:0043410,GO:0043436,GO:0043473,GO:0043546,GO:0044093,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045471,GO:0045595,GO:0045596,GO:0045601,GO:0045602,GO:0045862,GO:0045936,GO:0045937,GO:0046100,GO:0046110,GO:0046113,GO:0046415,GO:0046434,GO:0046483,GO:0046486,GO:0046677,GO:0046700,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0048037,GO:0048066,GO:0048069,GO:0048072,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050250,GO:0050421,GO:0050660,GO:0050662,GO:0050678,GO:0050680,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051093,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051336,GO:0051345,GO:0051536,GO:0051537,GO:0051540,GO:0051704,GO:0051707,GO:0051716,GO:0051896,GO:0051898,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070302,GO:0070304,GO:0070555,GO:0070674,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071356,GO:0071466,GO:0071704,GO:0071949,GO:0072521,GO:0072522,GO:0072523,GO:0072524,GO:0072527,GO:0080090,GO:0080134,GO:0080135,GO:0090287,GO:0090288,GO:0097159,GO:0097184,GO:0097305,GO:0098809,GO:1900744,GO:1900745,GO:1900746,GO:1900747,GO:1901265,GO:1901292,GO:1901342,GO:1901343,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901698,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902547,GO:1902548,GO:2000026,GO:2000116,GO:2000181,GO:2000377,GO:2000379,GO:2001056,GO:2001212,GO:2001213
Exons1
Evalue9.04e-12
EggNOG OGsCOG4631@1|root,KOG0430@2759|Eukaryota,38GEI@33154|Opisthokonta,3BC8Q@33208|Metazoa,3CXMB@33213|Bilateria,41USP@6656|Arthropoda,3SGUI@50557|Insecta,46EKS@7399|Hymenoptera
EC1.17.1.4,1.17.3.2,1.2.3.1
DescriptionAldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Cds size198
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789221.773235-CDS-D-mesarthrocarpus_Contig10904:30..2281680789221.773235-CDS-D-mesarthrocarpus_Contig10904:30..228Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10904 31..228 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789221.7882245-UTR-D-mesarthrocarpus_Contig10904:228..2461680789221.7882245-UTR-D-mesarthrocarpus_Contig10904:228..246Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10904 229..246 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10904.1.1prot_D-mesarthrocarpus_Contig10904.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10904 31..228 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10904.1.1

>prot_D-mesarthrocarpus_Contig10904.1.1 ID=prot_D-mesarthrocarpus_Contig10904.1.1|Name=mRNA_D-mesarthrocarpus_Contig10904.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=66bp
MYTDDIPALPGTLYTGLVLSARPHARLIQVDPSAAEAAEGVERFLSVKDV
PEGGTNVIGEHTDRSI
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mRNA from alignment at D-mesarthrocarpus_Contig10904:31..246-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10904.1.1 ID=mRNA_D-mesarthrocarpus_Contig10904.1.1|Name=mRNA_D-mesarthrocarpus_Contig10904.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10904:31..246- (Discosporangium mesarthrocarpum MT17_79)
CAGGTCTCTGGCGAGGCCATGTATACAGACGACATCCCAGCCCTCCCAGG
TACCCTGTACACAGGGCTGGTCCTCTCTGCCAGGCCTCACGCGCGCCTGA
TACAGGTGGACCCCTCAGCAGCAGAGGCAGCAGAGGGGGTGGAGCGCTTC
CTCTCCGTTAAGGACGTGCCAGAGGGGGGCACAAACGTCATCGGTGAGCA
TACAGACAGATCTATA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10904:31..246-

>mRNA_D-mesarthrocarpus_Contig10904.1.1 ID=mRNA_D-mesarthrocarpus_Contig10904.1.1|Name=mRNA_D-mesarthrocarpus_Contig10904.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=198bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10904:31..246- (Discosporangium mesarthrocarpum MT17_79)
ATGTATACAGACGACATCCCAGCCCTCCCAGGTACCCTGTACACAGGGCT
GGTCCTCTCTGCCAGGCCTCACGCGCGCCTGATACAGGTGGACCCCTCAG
CAGCAGAGGCAGCAGAGGGGGTGGAGCGCTTCCTCTCCGTTAAGGACGTG
CCAGAGGGGGGCACAAACGTCATCGGTGAGCATACAGACAGATCTATA
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