mRNA_D-mesarthrocarpus_Contig10900.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10900.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10900.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: D8LNN8_ECTSI (Eukaryotic translation initiation factor 3 subunit D n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN8_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 4.490e-105
Identity = 155/196 (79.08%), Postives = 174/196 (88.78%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGNRKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVK----LGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      +VNGT+FLDKR+ASQ DYLTVNETA+DPP PGD+P  NINAPDRLSLEATMINQNFSQQILK GNRK L MPNPFFDKD+A PG+TPAAIGYRYRKF+LG ++T++ RCE+HGTAVK     GEKQ+++A+ALNEWDSKLAGG EWRQ+IDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG
Sbjct:  286 IYPWDIVVQKVNGTLFLDKREASQLDYLTVNETAVDPPTPGDDPTNNINAPDRLSLEATMINQNFSQQILKPGNRKNLEMPNPFFDKDEAAPGMTPAAIGYRYRKFQLGANYTVVARCEVHGTAVKPGMKAGEKQYMSAFALNEWDSKLAGGVEWRQKIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 481
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A835Z0I8_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I8_9STRA)

HSP 1 Score: 264 bits (675), Expect = 9.510e-83
Identity = 127/193 (65.80%), Postives = 156/193 (80.83%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGNRKELGMPNPFF-DKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            ++P      +VNGT+F+DKRD SQFD+LTVNETA D P   ++PE NIN PDRLSLEATMINQNFSQQILK G R    MPNPFF D++ A+ G  P+++ YRYR+F LG +  I+ RCELHG   K GE+Q++TAYALNEWDSKLAG  +WRQ++D+QRGA+LATELKNN+AKLAKWTAQSI++GADQMK+G
Sbjct:  280 VFPWDVVIQKVNGTLFMDKRDNSQFDFLTVNETAYDTPAVNEDPE-NINNPDRLSLEATMINQNFSQQILKDGARTTFDMPNPFFGDEEGAEGGSQPSSVAYRYRRFSLGPELNIVARCELHGIVQKRGEQQYMTAYALNEWDSKLAGAVDWRQKLDSQRGAVLATELKNNAAKLAKWTAQSIIAGADQMKLG 471
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A6U1Q148_9STRA (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q148_9STRA)

HSP 1 Score: 255 bits (651), Expect = 7.450e-79
Identity = 123/196 (62.76%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGN---RKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGN-DFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      +++ T+F DKRD SQFDYLTVNETA + P P  +   NIN PDRL+LEATMINQNFSQ +LK G+   RKE+  PNPFFD++DA+  + PA + YRYR+FK G     +I RCE++G+ +K G++Q++T YALNEWDSKL+   EWRQ+IDTQRGAILATELKNNS KLAKWTAQSIL+GADQMKIG
Sbjct:  309 VYPWDLVVQKLDDTLFFDKRDNSQFDYLTVNETAYEAPAPNQDDPDNINNPDRLALEATMINQNFSQMVLKQGDESQRKEMDHPNPFFDEEDAEENMEPATLAYRYRRFKFGGGSINLIARCEINGSVLKRGKQQYMTTYALNEWDSKLSNSEEWRQKIDTQRGAILATELKNNSCKLAKWTAQSILAGADQMKIG 504
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BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A7S2P8F0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P8F0_9STRA)

HSP 1 Score: 246 bits (629), Expect = 8.430e-76
Identity = 121/189 (64.02%), Postives = 149/189 (78.84%), Query Frame = 1 
Query:   34 NGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAG-------NRKELGMPNPFFDKDD-AKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            NGT+F DKRD+SQFD+LTV+ETA  PP+  D+  + IN+P+RLSLEAT INQNFSQQIL+         +RK   +PNPF+D+DD A  G+ PA++ Y+YR+F LG D  ++ RCELHG   K GE+Q +TA+ALNEWDSKL+GG  WR +IDTQRGA+LATELKNNS KLAKWTAQSIL+GADQMKIG
Sbjct:  298 NGTLFFDKRDSSQFDFLTVSETANQPPLRSDDDPEGINSPERLSLEATTINQNFSQQILRQSKTPNNQSHRKNFDLPNPFYDEDDGAANGMEPASVAYKYRRFTLG-DIKLVCRCELHGLVQKRGEEQTMTAFALNEWDSKLSGGINWRDKIDTQRGAVLATELKNNSCKLAKWTAQSILAGADQMKIG 485
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BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A7S1BPB9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPB9_9STRA)

HSP 1 Score: 246 bits (628), Expect = 3.480e-75
Identity = 121/198 (61.11%), Postives = 151/198 (76.26%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTI-FLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAG-----NRKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      ++ G I F DKRDASQFD+LTV+ETA +PP   DE    IN PDRLSLEAT INQNFSQQIL++G     +RK+  +PNPFFD+DDA  G+ PA++ YRYR+F LG+   ++ RCELHG   K G  Q++TA+ALNEWD  L+GG  WR++ID+QRGA+LATE+KNNS K+AKWTAQSILSGADQMK+G
Sbjct:  330 IYPWDVVVQKLPGNILFFDKRDASQFDFLTVSETAYNPPSKSDEDSNGINTPDRLSLEATTINQNFSQQILRSGPQGAASRKQFDVPNPFFDEDDAD-GMEPASVAYRYRRFALGDAIKLVCRCELHGIVSKGGSDQYMTAFALNEWDPTLSGGISWREKIDSQRGAVLATEIKNNSCKVAKWTAQSILSGADQMKVG 526
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BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A7S2CZZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZZ7_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.050e-71
Identity = 113/193 (58.55%), Postives = 149/193 (77.20%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGN-RKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      ++ G+IF DKRD SQFDYLTV+ETA +PP   ++ +  IN P++LSLEA++INQNF+QQIL     R+++  PNPF+D++++ PG+ PA++ +RYRKF       ++ RCELHGT  K GEKQ++TAYALNEWDSK + G EWRQ+ID QRGA+LATELKNNS KLAKWT QS+++GADQMKIG
Sbjct:  124 VYPWDIVVQKMGGSIFFDKRDDSQFDYLTVSETAYEPPAVSEDADA-INTPEKLSLEASVINQNFTQQILHGEKGRQQMDDPNPFYDEEES-PGMEPASVAFRYRKFTFPG-IELVVRCELHGTVTKRGEKQYMTAYALNEWDSKHSAGIEWRQKIDQQRGAVLATELKNNSCKLAKWTCQSMIAGADQMKIG 313
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: F0YJC3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC3_AURAN)

HSP 1 Score: 224 bits (571), Expect = 2.670e-67
Identity = 116/193 (60.10%), Postives = 145/193 (75.13%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGNRKE-LGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      +++GT+  DKRD + FD+LTV+ET+ +PP P DE    IN P++LS+EATMINQNFSQQILK     E + +PNPF D   A+    PA++ YRYRKF LG + TI+ R ELHG   K GEK  +TAY LNEWDSKL+GG EWRQ+ID+QRGA+LATELKNNS KLA+WTAQSIL+GA+QMK+G
Sbjct:  281 VYPWDVIVQKLDGTLVFDKRDTAAFDFLTVSETSHEPP-PADE----INTPEKLSIEATMINQNFSQQILKTDPAPEKMALPNPFAD---AESESKPASMAYRYRKFALG-EHTIVARTELHGLVEKRGEKHKMTAYCLNEWDSKLSGGVEWRQKIDSQRGAVLATELKNNSCKLARWTAQSILAGAEQMKLG 464
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BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: A0A8J2SUE1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUE1_9STRA)

HSP 1 Score: 221 bits (562), Expect = 9.190e-66
Identity = 111/210 (52.86%), Postives = 146/210 (69.52%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIP------------------GDEPEKNINAPDRLSLEATMINQNFSQQILKAGNRKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            +YP      +++G +  DKRD + FDYLTV+ET+ DPP                     DEP  +IN PD+LS+EATMINQNFSQQIL     +++ +PNPF D ++A+    PA++ YRYRKF+LG +  ++ R E+H    K G+ Q +TA+ALNEWDSKL+GG EWRQ+ID QRGA+LATELKNNS KLA+WTAQSIL+GA+QMK+G
Sbjct:  282 VYPWDVVVQKLDGVLVFDKRDTANFDYLTVSETSHDPPKSLEEIEEAKRFDRRRNKKEDDEPTSDINTPDKLSIEATMINQNFSQQILSDKAPEKMSLPNPFADTENAE--AKPASLAYRYRKFQLG-EHALVARTEVHAVVDKRGDLQKMTAFALNEWDSKLSGGVEWRQKIDAQRGAVLATELKNNSCKLARWTAQSILAGAEQMKLG 488
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: B7G170_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G170_PHATC)

HSP 1 Score: 213 bits (542), Expect = 6.540e-65
Identity = 111/185 (60.00%), Postives = 136/185 (73.51%), Query Frame = 1 
Query:   34 NGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGNRKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGA----EWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            NGTIF DKRD SQFDYLTV ETA + P      E+ IN P+RL LEATM+NQNFSQQILK   RKE+ +PNPFFD+DDA  G+ PA+  +RYRKF +    T++ R ELHG      + Q++TA+AL+E+  + A G+     WR +ID QRGA+LATELKNNS KLAKWTAQS+L+GADQMKIG
Sbjct:  120 NGTIFFDKRDNSQFDYLTVQETAYNAPAD----EEGINTPERLGLEATMVNQNFSQQILKKSGRKEMDLPNPFFDEDDAD-GMEPASTAFRYRKFVMDAGTTVVVRTELHGI---FKQTQNMTAFALSEYTPQAAAGSPQVISWRDKIDNQRGAVLATELKNNSFKLAKWTAQSLLAGADQMKIG 296
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Match: K3XBY3_GLOUD (Eukaryotic translation initiation factor 3 subunit D n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBY3_GLOUD)

HSP 1 Score: 218 bits (554), Expect = 6.960e-65
Identity = 113/193 (58.55%), Postives = 140/193 (72.54%), Query Frame = 1 
Query:    1 LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINAPDRLSLEATMINQNFSQQILKAGN-RKELGMPNPFFDKDDAKPGITPAAIGYRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAEWRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG 576
            ++P      +VN  +F DKRD S FD +TVNE A DPP   D+P+ +IN PDRLSLEATMINQN SQQ++KA + +KE   PNPF   DDA    TPA   YRYRKF+LG    ++ RCE+HG + K    Q++ A+ALNE+D KLAGG EWR++ID+QRGAILA ELKNNS KLAKWTAQ++L G D+MKIG
Sbjct:  276 VFPWDIVVQRVNNMVFFDKRDQSNFDLVTVNENASDPPQ-SDDPD-SINHPDRLSLEATMINQNLSQQVMKATSAKKEFAEPNPFAS-DDA----TPATYAYRYRKFELGGGLNLVTRCEVHGVSHKKEADQYVAAFALNEYDPKLAGGIEWRKKIDSQRGAILANELKNNSCKLAKWTAQALLGGIDEMKIG 461
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10900.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNN8_ECTSI4.490e-10579.08Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z0I8_9STRA9.510e-8365.80Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U1Q148_9STRA7.450e-7962.76Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2P8F0_9STRA8.430e-7664.02Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1BPB9_9STRA3.480e-7561.11Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2CZZ7_9STRA1.050e-7158.55Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0YJC3_AURAN2.670e-6760.10Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SUE1_9STRA9.190e-6652.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7G170_PHATC6.540e-6560.00Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
K3XBY3_GLOUD6.960e-6558.55Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10900contigD-mesarthrocarpus_Contig10900:57..3489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LNN8
Preferred nameEIF3D
PFAMseIF-3_zeta
Model size579
Max annot lvl2759|Eukaryota
KEGG koko:K02987,ko:K03251,ko:K10136
KEGG Pathwayko03010,ko03013,ko04115,map03010,map03013,map04115
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000339,GO:0001732,GO:0002181,GO:0002183,GO:0002191,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005813,GO:0005815,GO:0005829,GO:0005852,GO:0005856,GO:0005911,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006464,GO:0006470,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006913,GO:0007154,GO:0007165,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009506,GO:0009628,GO:0009639,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010017,GO:0010019,GO:0010035,GO:0010038,GO:0010380,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0012505,GO:0015630,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016282,GO:0016311,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016791,GO:0019080,GO:0019081,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030054,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032879,GO:0032880,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0042578,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045727,GO:0046686,GO:0046906,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051193,GO:0051195,GO:0051234,GO:0051246,GO:0051247,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055044,GO:0060255,GO:0060341,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070993,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0075522,GO:0075525,GO:0080090,GO:0090056,GO:0097159,GO:0098808,GO:0098827,GO:0104004,GO:0140096,GO:1900180,GO:1900182,GO:1901363,GO:1901401,GO:1901402,GO:1901463,GO:1901464,GO:1901564,GO:1901566,GO:1901576,GO:1902325,GO:1902415,GO:1902416,GO:1903827,GO:1903829,GO:1905214,GO:1905216,GO:1990904,GO:2000112
Exons4
Evalue7.36e-106
EggNOG OGsKOG2479@1|root,KOG2479@2759|Eukaryota
Descriptiontranslation initiation factor activity
Cds size579
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789221.5158734-CDS-D-mesarthrocarpus_Contig10900:56..1611680789221.5158734-CDS-D-mesarthrocarpus_Contig10900:56..161Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10900 57..161 -
1680789221.5329149-CDS-D-mesarthrocarpus_Contig10900:1041..11891680789221.5329149-CDS-D-mesarthrocarpus_Contig10900:1041..1189Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10900 1042..1189 -
1680789221.5505176-CDS-D-mesarthrocarpus_Contig10900:1688..17861680789221.5505176-CDS-D-mesarthrocarpus_Contig10900:1688..1786Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10900 1689..1786 -
1680789221.5629973-CDS-D-mesarthrocarpus_Contig10900:3261..34891680789221.5629973-CDS-D-mesarthrocarpus_Contig10900:3261..3489Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10900 3262..3489 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10900.1.1prot_D-mesarthrocarpus_Contig10900.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10900 57..3489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10900.1.1

>prot_D-mesarthrocarpus_Contig10900.1.1 ID=prot_D-mesarthrocarpus_Contig10900.1.1|Name=mRNA_D-mesarthrocarpus_Contig10900.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=193bp
LYPCACTYAQVNGTIFLDKRDASQFDYLTVNETAMDPPIPGDEPEKNINA
PDRLSLEATMINQNFSQQILKAGNRKELGMPNPFFDKDDAKPGITPAAIG
YRYRKFKLGNDFTIIGRCELHGTAVKLGEKQHITAYALNEWDSKLAGGAE
WRQRIDTQRGAILATELKNNSAKLAKWTAQSILSGADQMKIG*
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mRNA from alignment at D-mesarthrocarpus_Contig10900:57..3489-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10900.1.1 ID=mRNA_D-mesarthrocarpus_Contig10900.1.1|Name=mRNA_D-mesarthrocarpus_Contig10900.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3433bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10900:57..3489- (Discosporangium mesarthrocarpum MT17_79)
TTGTATCCATGTGCATGTACATATGCACAGGTCAACGGCACCATCTTCCT
GGACAAGCGGGATGCGAGCCAGTTCGACTATCTCACGGTCAACGAGACTG
CCATGGACCCCCCCATCCCGGGGGATGAACCAGAGAAGAACATCAACGCC
CCCGACCGCCTAAGCCTGGAAGCCACAATGATCAACCAGAACTTCAGCCA
GCAGATACTCAAGGCCGGGAACAGGAAGGTGTGTGCGTGCCCCTAATCCG
GATGATCCGTCAAGCCTTGTGTACAGCGACAGTAGGCTTGTGCTGCGTGC
TCCACGGTAGGTACACACAAAGGTTCTTCCCGTTCAGTACGCCGTTCAGT
GTACTGTCCGGTACTAGTTGTTGCTGTTTCTGTACTGGTGTTAGTGTGGC
GGATGGTGGCAACGAGCACGGGTCGGTGTACGGAACGGTATACTGAATGG
CATACTGAACGGTATGCTGAAGAGAAGGAAGTTCTTTTGAAGTGTGCGCA
ACCTACTCATGCTTGCATGCCCCACCCTTAGCGGCATGCACTTCCTTCCG
TTTAGCGTTTGTTGCTGCCCGTCATGCTGACTGTACCGTACCGCGTGAAC
AGAGAGATGGATAGTACTGAATGGTTTAGCTCAACATAGGAAGGGCTTCA
GAATGCTTCGAGGCGTTTGTCAGACCTTGTCTCCTGGGGCATGTGGGGGA
GGAGCTGCACGAGGCGCCCTTGAGCATCTATGCGCTGGGGTTAGGGTTAG
GGTTAGGGTTAGGGTTAGGGTTAGACAGAGCGTCTGTCCGTCCGTCCGTC
CGTCCGTCCGTCCGTGTCTCTACGCATTGTCATTGCTGCGGCTAGGGGAA
GCGCCTTGCACTTTTGAAAGAGCTTTTTTGAAAGAGCTGCACAGCGAGGG
TGGCGGGGGGGCGTTATTTGCCATGCCGGGCCGCACAAGAGTACCCTGAA
CAATGTAGATGCAGTTGCAGATGCACAGCGCTTTTTTTTTTTTCTTCGAC
CTGTCTGCAAGGTTTGGGGGGCAGGTGGAGGAGAAGGGACGAGGGGGGAA
CTATCCTTTTTGCGGGGCGGTGCAGCGGGGCGAGGAGACAGTAGCAGGGG
GAAGGCATGTGTTGCAGTGGGGTTTCGTGAGGCACTCCTGTCATCCCTTT
TGAGCTAAGATGCCTGGGATGTTGGAGTGTATGGGTGGGGTGGGCAGGTA
CCTTGCAAGTGACAGAAAAAAAAAATGTGTCCAACGACGTGTAGTTTCTG
GCACAAAAAGAAAATGTGACATAGGGGGTTCATGCACCACTATGTACCAC
TAGGCAGGCAGGCTTGCAGGCTTGCAGGATTGCAGGATTGCAGGCACGCG
GGCAAGCAAGAAGCCAGTTGGTAACGACGATCATGTGGTTCTTTCCCCTT
CTGTTTTTCATGTCAGCACCTGTGTCATTACTGTTGCCGTGGGATTTTGG
TGGTTCGTTGTCCTGCAAGTTGGCTACGTAGCGCTGCTGAAAAAAGAGAC
AAAAGACACGGCAAGAGAAGCACCCCCCATCCAGCAGTGCCCCAATCCCC
CCCCCCCCCCCCCCCCCCCCGCACTCCCCTGTGCCCCCCCTGCAACGCCC
CCGCTCCCAACTGACTGACAGATGACCCCCGGCATTGCCTTCTCTTTCTT
GTGGTATGCCCCTTGTCTTCCTCCCTTGTTCCTCCCACTCCCACACCCCT
CAGGAGCTGGGTATGCCCAACCCCTTCTTTGACAAGGATGATGCGAAACC
AGGCATTACCCCTGCTGCCATTGGCTACCGGTACCGGAAGTTCAAGCTAG
GGTGAGACGGCCTTCGGGGGTATGGTTTAATTTGAGGGAGAGGCGGGTTG
GGAAAAGAAAGAGAGAGACGGGGAGAGAGAGAGATGGAGAGAGGCAGAGA
GAGACAGAGAGAGAGAGACAGTGAGAGAGCCCTTCCTCCGGGGGCGTAAA
AGAGTTTGTCAGCCGGGTGATATGTGCTGCTGCCCTGCGGCATATGAGCG
ACTTCCTTCTTGATCAACCAGTATTGTCGTGGGGGATTTCGATCGGCAGA
ATAGTCCTAGTTGATGTCTGTCATGGGGTTGGCCTGGGCTTTGGGTGCGG
CGATTTTCTGTCTATCTCATCTCAAAAACCAACGAAATGAAGTGTAGCCG
TGAGAAAAGTCAGATTTTTTTTGAGTTTCCCCCGCCGAAGACGTGGTTGA
CAAGAGCAAATAAGCTCTTTTTTTTGTGTTCTTGGCGCGAAGCTGAAATC
AAACCAATGACAAAAAAAAATACACACGAAAAAACCCCGTTATCTTTAAG
CAACGACTTCACCATCATCGGGCGGTGTGAGCTGCACGGGACAGCTGTCA
AGCTGGGGGAGAAGCAACACATCACTGCCTACGCCCTGAACGAGTGGGAC
AGCAAGCTTGCAGGCGGGGCGGAGTGGAGGCAACGGATTGACACACAGGT
AAAAGGTTGCCCTGACTCCTGTACTTTGCTTTTTTTTCCGCTCATTTTTA
TTTCTACGTCCATGAGGAGAAAGGAATGGTTTCTGTTGTATTTTTGATCA
GGGCAACAATGAATAGCAAGAATGTGATGATTCTTCCCCCTAAAATTAGT
AGGTCAAAAGAACAGATTGTTTTTGCTCGAGTAATTGTTGCCTTTCCTAA
AACAGGCGGGGTGTAGAGCACTTCTTGGATGGAGATATGAAAGCGTGGGA
TGAGCGCCACGAGGCATCCCCACCCTTGCCGGGGGTTACGTAGCACCAAC
AAGAACAGTCGATTCTTTTGCCGGGTATATATATATATATTGTTTATTTG
CCACGTGCAGTGCTTTTTTTTTGTAGCAAAACTTTTTTTTTCCTTTGTGC
GAAACCCCCGCTGTGCTACGCTGTCGAATGGAGTGAGTGGTCTTGTCCTT
CTGAGATGACCGCGTGTGCTTTTTTTTTTTTGGCACGGCACGGGGGTTTG
ACTTACCATGGCAGGCAGGCAGGTCCTCGCAGCAACCCGTGTTTTTTTTT
TCTTTCATTGAACGTGACGGGGGCGCCGAGGGGGCTCCCTCGAGGCTAGG
TGGTAACTCTCCACCGCCTAGTCCCAAGGGTGACGCAACACGCAGCGCGC
CGGCTCTTTTTGTACCGCGGCAACCCCGCCGGAAATACCGCCGTGCGCCA
AGATCTCGGCGGAGTCATTGCCCCCTCGCTGTGTGTACCTCTTCCACTTG
ACCGTAGACTATAGCTTCCCCTCCCCTCCCCTCCCCTCCCCTCCTCCTCC
TCCTCCTCCTCCTCCTGCCTCCCCATATTGGGGGGGGGGTGGGGGTGGGG
GTTGTGAATGAAAACCCTCCGTGTCCAGAGGGGAGCCATCCTGGCCACGG
AGCTGAAGAACAACTCAGCCAAACTGGCGAAGTGGACGGCGCAGTCGATC
CTCTCAGGAGCAGACCAGATGAAGATTGGGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10900:57..3489-

>mRNA_D-mesarthrocarpus_Contig10900.1.1 ID=mRNA_D-mesarthrocarpus_Contig10900.1.1|Name=mRNA_D-mesarthrocarpus_Contig10900.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=579bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10900:57..3489- (Discosporangium mesarthrocarpum MT17_79)
TTGTATCCATGTGCATGTACATATGCACAGGTCAACGGCACCATCTTCCT
GGACAAGCGGGATGCGAGCCAGTTCGACTATCTCACGGTCAACGAGACTG
CCATGGACCCCCCCATCCCGGGGGATGAACCAGAGAAGAACATCAACGCC
CCCGACCGCCTAAGCCTGGAAGCCACAATGATCAACCAGAACTTCAGCCA
GCAGATACTCAAGGCCGGGAACAGGAAGGAGCTGGGTATGCCCAACCCCT
TCTTTGACAAGGATGATGCGAAACCAGGCATTACCCCTGCTGCCATTGGC
TACCGGTACCGGAAGTTCAAGCTAGGCAACGACTTCACCATCATCGGGCG
GTGTGAGCTGCACGGGACAGCTGTCAAGCTGGGGGAGAAGCAACACATCA
CTGCCTACGCCCTGAACGAGTGGGACAGCAAGCTTGCAGGCGGGGCGGAG
TGGAGGCAACGGATTGACACACAGAGGGGAGCCATCCTGGCCACGGAGCT
GAAGAACAACTCAGCCAAACTGGCGAAGTGGACGGCGCAGTCGATCCTCT
CAGGAGCAGACCAGATGAAGATTGGGTGA
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