mRNA_D-mesarthrocarpus_Contig109.11.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig109.11.1
Unique NamemRNA_D-mesarthrocarpus_Contig109.11.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig109.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig109contigD-mesarthrocarpus_Contig109:39723..40457 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size735
Hectar predicted targeting categoryother localisation
Exons1
Cds size735
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789220.6425326-CDS-D-mesarthrocarpus_Contig109:39722..404571680789220.6425326-CDS-D-mesarthrocarpus_Contig109:39722..40457Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig109 39723..40457 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig109.11.1prot_D-mesarthrocarpus_Contig109.11.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig109 39723..40457 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig109.11.1

>prot_D-mesarthrocarpus_Contig109.11.1 ID=prot_D-mesarthrocarpus_Contig109.11.1|Name=mRNA_D-mesarthrocarpus_Contig109.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=245bp
MISPRGKHGVACSSGTVRAKKSTTSWPRTMLCQKNPRKGEQMKHNKMSTR
YTCATTSTLTTRGPAADVVWNHQLDGIGARNELKHTYGNNGPEDRASKFH
SLNIKMFQTRCKSQEGVQQLIIRLGNVWANYQNMGVEKEDDGTTGILLAR
FQEHMPSTFEVITLIRNSTYNDNKNSLLAITRYKSIRTGQRNQLRRVRRR
LWQCTRARSKDRGDRFKQKGTQKTWPQPNQCEFCLKRNHRRREC*
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mRNA from alignment at D-mesarthrocarpus_Contig109:39723..40457+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig109.11.1 ID=mRNA_D-mesarthrocarpus_Contig109.11.1|Name=mRNA_D-mesarthrocarpus_Contig109.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=735bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig109:39723..40457+ (Discosporangium mesarthrocarpum MT17_79)
ATGATATCACCTCGTGGCAAACATGGAGTCGCCTGTTCTTCGGGTACTGT
GCGGGCAAAGAAATCCACCACATCATGGCCAAGGACTATGCTGTGCCAGA
AGAACCCGAGGAAGGGAGAACAAATGAAGCACAACAAAATGAGCACAAGG
TACACCTGTGCAACAACGTCCACTTTGACGACCAGAGGACCAGCGGCGGA
CGTGGTTTGGAACCACCAGCTCGATGGGATAGGGGCGCGGAACGAACTAA
AGCACACATACGGGAACAACGGGCCAGAAGACAGAGCCTCCAAATTCCAC
TCCCTGAACATAAAAATGTTCCAAACAAGGTGCAAATCCCAGGAAGGGGT
CCAACAATTAATCATACGGCTGGGCAACGTCTGGGCCAATTATCAAAACA
TGGGGGTGGAAAAGGAGGACGATGGCACAACGGGTATTCTACTCGCCAGG
TTTCAGGAGCATATGCCGTCAACTTTTGAGGTTATCACGCTCATCAGGAA
TTCAACATACAACGACAATAAAAACAGTCTGCTCGCGATAACGAGGTACA
AAAGTATCCGGACGGGTCAACGGAATCAGCTACGTCGAGTACGTCGTAGA
CTATGGCAATGTACACGGGCAAGAAGCAAGGATCGCGGGGACAGATTCAA
ACAAAAGGGGACCCAGAAAACGTGGCCACAACCCAACCAATGCGAATTCT
GCCTCAAGCGGAACCATCGACGGCGGGAATGCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig109:39723..40457+

>mRNA_D-mesarthrocarpus_Contig109.11.1 ID=mRNA_D-mesarthrocarpus_Contig109.11.1|Name=mRNA_D-mesarthrocarpus_Contig109.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=735bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig109:39723..40457+ (Discosporangium mesarthrocarpum MT17_79)
ATGATATCACCTCGTGGCAAACATGGAGTCGCCTGTTCTTCGGGTACTGT
GCGGGCAAAGAAATCCACCACATCATGGCCAAGGACTATGCTGTGCCAGA
AGAACCCGAGGAAGGGAGAACAAATGAAGCACAACAAAATGAGCACAAGG
TACACCTGTGCAACAACGTCCACTTTGACGACCAGAGGACCAGCGGCGGA
CGTGGTTTGGAACCACCAGCTCGATGGGATAGGGGCGCGGAACGAACTAA
AGCACACATACGGGAACAACGGGCCAGAAGACAGAGCCTCCAAATTCCAC
TCCCTGAACATAAAAATGTTCCAAACAAGGTGCAAATCCCAGGAAGGGGT
CCAACAATTAATCATACGGCTGGGCAACGTCTGGGCCAATTATCAAAACA
TGGGGGTGGAAAAGGAGGACGATGGCACAACGGGTATTCTACTCGCCAGG
TTTCAGGAGCATATGCCGTCAACTTTTGAGGTTATCACGCTCATCAGGAA
TTCAACATACAACGACAATAAAAACAGTCTGCTCGCGATAACGAGGTACA
AAAGTATCCGGACGGGTCAACGGAATCAGCTACGTCGAGTACGTCGTAGA
CTATGGCAATGTACACGGGCAAGAAGCAAGGATCGCGGGGACAGATTCAA
ACAAAAGGGGACCCAGAAAACGTGGCCACAACCCAACCAATGCGAATTCT
GCCTCAAGCGGAACCATCGACGGCGGGAATGCTGA
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