mRNA_D-mesarthrocarpus_Contig10894.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10894.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10894.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: D8LHY7_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY7_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.200e-110
Identity = 185/207 (89.37%), Postives = 190/207 (91.79%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEV 621
            +VNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSD   L   KDL I ISAD D RTLTIRD GVGMTKADLISNLGTVARSGTTNFVEALTETGDL LIGQFGVGFYSVYLVADKVQVISK NDDDQ++WESTADSTF VSKDPRGNTLGRGTEIVLHLKEDAGEFLSE  LK LIHRYSEFITFPIYQLVE+EEE+EV
Sbjct:   62 EVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDPDKLGTAKDLEIRISADKDARTLTIRDAGVGMTKADLISNLGTVARSGTTNFVEALTETGDLGLIGQFGVGFYSVYLVADKVQVISKSNDDDQYVWESTADSTFTVSKDPRGNTLGRGTEIVLHLKEDAGEFLSESTLKNLIHRYSEFITFPIYQLVEKEEEIEV 268
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7S3K2Q3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 2.810e-93
Identity = 155/212 (73.11%), Postives = 183/212 (86.32%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTET---GDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEVDE 627
            +VNRLMDIIINSLYKNK+IFLRELISNASDA+DKIR+LSVSD   L++ K+L I I  +SD+RTLTI D GVGMTKADL++NLGTVA+SGTTNFVEA++++   GDLSLIGQFGVGFYSVYLVADKV+V SKHN+DDQ+IWES+ADS+F V KDP GNTLGRGTEI L LKEDAGEFL +DRL+ L+ RYSEFITFPIY    + E V +++
Sbjct:   40 EVNRLMDIIINSLYKNKEIFLRELISNASDAIDKIRYLSVSDPTVLDSKKELDIRIQFNSDERTLTITDAGVGMTKADLVANLGTVAKSGTTNFVEAMSQSENSGDLSLIGQFGVGFYSVYLVADKVKVRSKHNNDDQYIWESSADSSFSVWKDPEGNTLGRGTEITLFLKEDAGEFLDQDRLEELVLRYSEFITFPIYLHKSKTETVTIED 251
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7S2RKZ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKZ1_9STRA)

HSP 1 Score: 306 bits (783), Expect = 6.790e-93
Identity = 163/210 (77.62%), Postives = 180/210 (85.71%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETG---DLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEV 621
            +VNRLMDIIINSLYK+KDIFLRELISNASDALDKIRFLSVSD AAL+A K+L I I  D D RTLTI D GVGMTKADLI+NLGTVA+SGTTNFVEAL   G   DLSLIGQFGVGFYSVYLVADKV+V SKHNDD+Q++WESTADSTF +++DPRGNTLGRGTEI L LK+DAGEFL +DRL+GLI RYSEFITFPI       E +EV
Sbjct:   69 EVNRLMDIIINSLYKSKDIFLRELISNASDALDKIRFLSVSDEAALDAKKELEIKIRFDKDARTLTITDSGVGMTKADLINNLGTVAKSGTTNFVEALAGGGEGVDLSLIGQFGVGFYSVYLVADKVRVASKHNDDEQYVWESTADSTFSIAQDPRGNTLGRGTEITLFLKDDAGEFLEQDRLEGLIKRYSEFITFPISLYKSSTETIEV 278
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A835YKX1_9STRA (Hsp90 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX1_9STRA)

HSP 1 Score: 301 bits (772), Expect = 3.140e-91
Identity = 160/210 (76.19%), Postives = 180/210 (85.71%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAAL-EANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEVDE 627
            +VNRLMDIIINSLYK K+IFLRE+ISNASDALDK+RF++VSD  AL E + +L I ISAD + RT+TI D GVGMT+ +LI+NLGTVA+SGTTNFVEAL ETGDLSLIGQFGVGFYSVYLVADKVQV+SKH  D Q+IWESTADSTF V +DPRG+TLGRGTEIVLHLKEDA EFL E RL  LIHRYSEFITFPIYQ  E  +EV  D+
Sbjct:   55 EVNRLMDIIINSLYKTKEIFLREVISNASDALDKLRFMAVSDKTALAEGDDELRIRISADKEARTITIADTGVGMTRQELIANLGTVAKSGTTNFVEALGETGDLSLIGQFGVGFYSVYLVADKVQVVSKHAGDKQYIWESTADSTFTVREDPRGDTLGRGTEIVLHLKEDADEFLEETRLADLIHRYSEFITFPIYQQREVSKEVGADD 264
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: F0Y644_AURAN (HATPase_c domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y644_AURAN)

HSP 1 Score: 296 bits (757), Expect = 2.390e-89
Identity = 153/198 (77.27%), Postives = 176/198 (88.89%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALT--ETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIY 588
            +VNRLMDIIINSLYKNK+IFLRE+ISN SDALDKIRFL+VSD+AAL+  K+L I IS D D RTLTI+D GVGMTKADL++NLGTVA+SGTTNFVEA++   +GDLSLIGQFGVGFYSVYLVAD+V+V SKHNDDDQH+WES ADS+F V +DP G+TLGRGTEI L LKEDAGEFL +DRL+ L+ RYSEFITFPIY
Sbjct:   40 EVNRLMDIIINSLYKNKEIFLREVISNGSDALDKIRFLAVSDAAALDTKKELEIRISFDKDARTLTIQDSGVGMTKADLVANLGTVAKSGTTNFVEAMSGDASGDLSLIGQFGVGFYSVYLVADRVRVRSKHNDDDQHVWESAADSSFTVWQDPLGDTLGRGTEIKLFLKEDAGEFLDQDRLEELVLRYSEFITFPIY 237
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7S2FDD0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDD0_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.150e-88
Identity = 156/197 (79.19%), Postives = 173/197 (87.82%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETG--DLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPI 585
            +VNRLMDIIINSLYKNK+IFLRELISNASDALDKIRFL+VSD +AL   KDL I I  D D RTLTI D GVGMTKADL++NLGTVA+SGTTNFVEAL+  G  DLSLIGQFGVGFYSVYLVADKV+V SK+NDDDQ+IWESTADS F+++KDPRGN+LGRGTEI L LKEDAGEFL +DRL  L+ RYSEFITFPI
Sbjct:   75 EVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLAVSDESALGDTKDLEIKIKFDKDARTLTIIDTGVGMTKADLVANLGTVAKSGTTNFVEALSGDGGGDLSLIGQFGVGFYSVYLVADKVRVASKNNDDDQYIWESTADSNFVIAKDPRGNSLGRGTEITLFLKEDAGEFLDQDRLDELVMRYSEFITFPI 271
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7R9U2P1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2P1_9STRA)

HSP 1 Score: 294 bits (753), Expect = 1.180e-88
Identity = 157/208 (75.48%), Postives = 178/208 (85.58%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEVD 624
            +VNRLMDIIINSLYKNK+IFLRE+ISNASDALDKIRFL+VSD  AL A ++L I ISAD + +TLTIRD GVGMTKADLI+NLGTVA+SGTTNF EAL+  GD+SLIGQFGVGFYSVYLVAD+V+V SKHNDDDQHIWESTADS F V  DP G++LGRGTEI L LKEDA EF  E RL+ LI RYSEFITFPIY  +++E+ V VD
Sbjct:   58 EVNRLMDIIINSLYKNKEIFLREVISNASDALDKIRFLAVSDENALAAGEELKIEISADREAKTLTIRDTGVGMTKADLIANLGTVAKSGTTNFAEALSGEGDISLIGQFGVGFYSVYLVADRVRVRSKHNDDDQHIWESTADSNFYVVADPEGSSLGRGTEITLFLKEDALEFTGEKRLEELIKRYSEFITFPIY--LQKEKTVTVD 263
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7S3XYP4_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYP4_HETAK)

HSP 1 Score: 291 bits (746), Expect = 1.520e-87
Identity = 156/211 (73.93%), Postives = 179/211 (84.83%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALE--ANKDLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETG-DLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEVD 624
            +V+RLMDIIINSLY+ K+IFLRELISNASDALDKIRFL+VSD   L   A K+L I IS D + +TLTIRD G+GMTKADL++NLGTVA+SGTTNFVEA++  G DLS+IGQFGVGFYSVYLVADKVQV+SKHNDDDQ++WESTADS F V++DPRGNTLGRGTEI L LKEDAG FL++ RL+ LI RYSEFITFPIY      EE EVD
Sbjct:   63 EVSRLMDIIINSLYQKKEIFLRELISNASDALDKIRFLAVSDEKVLGEGAEKELSIKISYDKEAQTLTIRDTGIGMTKADLVANLGTVAKSGTTNFVEAMSGGGGDLSMIGQFGVGFYSVYLVADKVQVVSKHNDDDQYLWESTADSNFAVARDPRGNTLGRGTEITLFLKEDAGSFLADARLEELISRYSEFITFPIYLWKAHTEEREVD 273
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A813AQH2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AQH2_9DINO)

HSP 1 Score: 280 bits (717), Expect = 2.590e-87
Identity = 146/209 (69.86%), Postives = 175/209 (83.73%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKD--LGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEV 621
            +V+RLMDIIINSLY+NK+IFLRELISNASDALDKIRFL+++D   L   ++  L IHI+ D + +TLTIRD GVGMTK DLI NLGTVARSGT+ FVEAL    D+SLIGQFGVGFYS YLVA KV+V+SKHNDD+Q IWES+AD+TF +++DPRGNTLGRGTEI L LKEDA + L +D+L+ +I RYSEFITFPIY   E++EEVEV
Sbjct:   54 EVSRLMDIIINSLYQNKEIFLRELISNASDALDKIRFLALADEEVLGEGEERNLDIHIAFDKEAKTLTIRDSGVGMTKQDLIQNLGTVARSGTSQFVEALAAGADVSLIGQFGVGFYSAYLVAHKVRVVSKHNDDNQMIWESSADATFSIAEDPRGNTLGRGTEITLFLKEDATDLLDQDKLEEMIRRYSEFITFPIYLRKEKQEEVEV 262
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BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Match: A0A7S1C8P7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8P7_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.900e-86
Identity = 146/209 (69.86%), Postives = 174/209 (83.25%), Query Frame = 1 
Query:    1 QVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANK--DLGIHISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLSLIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGNTLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEVEV 621
            +V+RLMDIIINSLY  K+IFLRE+ISNASDALDKIRFL++SD  AL   +  +L + IS D +++TLTIRD G+GMTK DLI+NLGTVA+SGT+ FVEAL++  DLSLIGQFGVGFYS+YLVADKVQV+SKHNDD QH+W STAD +F V++DPRG+TLGRGTEI L LKEDAGEF  +++LK LI RYSEFITFPIY      E VEV
Sbjct:   89 EVSRLMDIIINSLYTKKEIFLREIISNASDALDKIRFLALSDENALGEGETAELEVRISFDKEEKTLTIRDRGIGMTKQDLITNLGTVAKSGTSQFVEALSQGADLSLIGQFGVGFYSIYLVADKVQVVSKHNDDAQHVWTSTADGSFAVAEDPRGDTLGRGTEITLFLKEDAGEFAEQEKLKELIRRYSEFITFPIYLQTSHTETVEV 297
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10894.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHY7_ECTSI1.200e-11089.37Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S3K2Q3_9STRA2.810e-9373.11Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S2RKZ1_9STRA6.790e-9377.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YKX1_9STRA3.140e-9176.19Hsp90 protein-domain-containing protein n=1 Tax=Tr... [more]
F0Y644_AURAN2.390e-8977.27HATPase_c domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S2FDD0_9STRA1.150e-8879.19Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7R9U2P1_9STRA1.180e-8875.48Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3XYP4_HETAK1.520e-8773.93Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A813AQH2_9DINO2.590e-8769.86Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S1C8P7_9STRA1.900e-8669.86Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10894contigD-mesarthrocarpus_Contig10894:157..2921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009035651.1
Preferred nameHSP90B
PFAMsHATPase_c,HATPase_c_3,HSP90
Model size1262
Max annot lvl2759|Eukaryota
KEGG koko:K04079,ko:K09487
KEGG Pathwayko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko04918,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map04918,map05200,map05215,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002790,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0005788,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006950,GO:0006970,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009306,GO:0009409,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009888,GO:0009934,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010073,GO:0010075,GO:0010243,GO:0010498,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022603,GO:0030054,GO:0030163,GO:0030433,GO:0031090,GO:0031974,GO:0032501,GO:0032502,GO:0032940,GO:0033036,GO:0033554,GO:0034976,GO:0036503,GO:0040008,GO:0042221,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046686,GO:0046903,GO:0048046,GO:0048507,GO:0048509,GO:0048638,GO:0048856,GO:0050789,GO:0050793,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051716,GO:0055044,GO:0065007,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098588,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700
Exons4
Evalue1.17e-89
EggNOG OGsCOG0326@1|root,KOG0020@2759|Eukaryota
Ec32 ortholog descriptionHeat shock protein 90
Ec32 orthologEc-18_001040.1
Descriptionunfolded protein binding
Cds size747
COG categoryO
BRITEko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10894.1.1prot_D-mesarthrocarpus_Contig10894.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10894 172..2421 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789220.176694-UTR-D-mesarthrocarpus_Contig10894:156..1711680789220.176694-UTR-D-mesarthrocarpus_Contig10894:156..171Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10894 157..171 +
1680789220.2386646-UTR-D-mesarthrocarpus_Contig10894:2421..29211680789220.2386646-UTR-D-mesarthrocarpus_Contig10894:2421..2921Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10894 2422..2921 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789220.1924472-CDS-D-mesarthrocarpus_Contig10894:171..3361680789220.1924472-CDS-D-mesarthrocarpus_Contig10894:171..336Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10894 172..336 +
1680789220.20567-CDS-D-mesarthrocarpus_Contig10894:829..10241680789220.20567-CDS-D-mesarthrocarpus_Contig10894:829..1024Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10894 830..1024 +
1680789220.2164624-CDS-D-mesarthrocarpus_Contig10894:1788..18851680789220.2164624-CDS-D-mesarthrocarpus_Contig10894:1788..1885Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10894 1789..1885 +
1680789220.226396-CDS-D-mesarthrocarpus_Contig10894:2131..24211680789220.226396-CDS-D-mesarthrocarpus_Contig10894:2131..2421Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10894 2132..2421 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10894.1.1

>prot_D-mesarthrocarpus_Contig10894.1.1 ID=prot_D-mesarthrocarpus_Contig10894.1.1|Name=mRNA_D-mesarthrocarpus_Contig10894.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp
MDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDSAALEANKDLGIH
ISADSDKRTLTIRDGGVGMTKADLISNLGTVARSGTTNFVEALTETGDLS
LIGQFGVGFYSVYLVADKVQVISKHNDDDQHIWESTADSTFIVSKDPRGN
TLGRGTEIVLHLKEDAGEFLSEDRLKGLIHRYSEFITFPIYQLVEREEEV
EVDEEEAGEEEEEEEGGEIGPGMRGQDGGGQDATFSSLCGLFHFAVAW*
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mRNA from alignment at D-mesarthrocarpus_Contig10894:157..2921+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10894.1.1 ID=mRNA_D-mesarthrocarpus_Contig10894.1.1|Name=mRNA_D-mesarthrocarpus_Contig10894.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2765bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10894:157..2921+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTTAACCGGCTGATGGACATCATCATCAACTCGCTCTACAAGAACAA
GGACATATTCCTGCGTGAGCTCATCTCCAATGCATCAGACGCCCTAGACA
AGATCCGATTCCTCTCAGTCTCAGACTCGGCTGCCCTGGAGGCCAACAAG
GACCTGGGCATCCACATCTCTGCTGACAGTGTGAGCACCCCCTTCCCCCT
CGCCCTGACTGACCTGAAGTCTAACTGCTTCCCCATGCTGACCCTACCCT
AACCCTCGCCATAGTGAGGCCCTAGTACAAGGCATAGATGCCTCCACTGA
TCCAGTATACGGTGTGAACTTGACCGCCTGCTGCACCTCCCTCTCACTAC
CTTAACCCTTAAAGATTGACCCCGACCATGCTGAGGTGGAAGTCCTCTGG
TTGGTCATGTACCTGTGATCTTTGTTGGAATGTGCCTCAGTACAGCACAG
CAACGGCTAAAAAACAGAGAACAGTCATGCCCGGACACAACCCCGCAGCC
AGGTGGAATAACAAAAGGAATATTAAAAAAAACACCAAAGACTACAAAAA
CAACTGCCCATCCCCCAACCCCCCCTCTCACCCCCCCCAATCATCCATCC
CCTCAAATTGAAAACAATATTTAATAGAACCTCTTCCTTGTGTCCTTCCA
TCCATCCCATCCACCTCATACAGGACAAGAGGACACTGACAATCCGGGAC
GGTGGGGTGGGCATGACCAAGGCTGACCTCATCTCCAACCTGGGCACCGT
AGCGCGATCAGGGACCACCAACTTTGTGGAGGCCCTCACTGAGACTGGGG
ACCTCTCCCTGATCGGCCAGTTTGGGGTTGGGTTCTACTCAGTCTACCTT
GTTGCAGACAAAGTGCAGGTACTATATATATATATAGGTGGCTACTTTAG
TGTCTGTTTTACATTACCTTCTTCTGGGGTTCGGGTTAGTTAAGCGGTAG
TGTGTTTTAAGGGGAAGGGGGGGGGGGGGTTGTGGGGGCCCTGTCCCTTG
CCGGGCAGTTTGGGGTTGGGTTCTTTTGTATTAGCCGGGTTGGAGGTAGG
GTTTTGGGTGGGCTGGTTTGCAGGCTGGGTTTGGGTTGGGTCTGGTCTGT
GTTCTTCTGGGATGAAGGATTGGGTGGGTTTAGGGCTAGTCTTGGAAGTT
GACGGAGGTACTTTGTACTTTCTGCTACTTGTCATTGCCTTGTGTCTCCT
GGAGAAGAAGGGACAAAATAGAGAGGGGGGCTATGCCTTGCGCGTCATCA
CCAGCTATAGTTTCGGGGTTCTTGTGGAGGGCATAGGAGAAGGGAGGCAG
AAGGTGGGGGAGGCCTTTGCTCTAATTGTGATGAGTGCTTGGTGTTGTTA
GGACCATCAGGGTTAGGGTTAGGGTTAGTTTGTTCCTGCTTTTCAATGTC
CAACCTTTGTGTTATGTATCACATGCGTTTGATGCCATTCATCCCAGGTT
ATTGATCATGCTTGTGTGAGAAGTCGTTTCAATCTGCCTTGTGTCTTCAA
GTATCTTCTTGTGTCTCCACCTTTCTTTGGGGGTTCGGAAGTTTCTCTGT
TCCCATTTCTCTGGTCACTTGTGCTCACTTTTGTTCTCTCTCTTTTTTCC
TCTCTCTCTCTCTCTCTCTACCATGACTTCAGGTTATCTCCAAGCACAAT
GATGACGACCAGCACATTTGGGAGTCCACTGCTGACAGCACCTTCATTGT
GTCCAAGGACCCAAGGGGGAACACTCTCGGTGAGTGGCCTGACATAGGAG
ATGACTTGCCGATTCATGGGCAGGTGAACAAATGCAAAGGGCTTTTTTCT
TTTCACCGGCCCTAACCCCAGCTAACCCCGGTCCATGTGTACTGCATGCC
TCTAATAACCCCTTACTCCCAAGTACTCTAAGTACCCTAACCATACATAA
GCGAATAAATTATAAACAAATGAATGCATGGACATATTAACACTAACAAA
GACTGCTGACGAACTAATTTAACAGGCCGGGGGACAGAGATTGTGCTGCA
TCTCAAGGAGGACGCGGGTGAGTTCCTCTCTGAGGACCGCCTGAAGGGGC
TCATTCACCGCTACAGCGAATTTATCACCTTCCCCATCTACCAGCTCGTG
GAGAGGGAGGAGGAGGTGGAGGTGGATGAAGAGGAGGCGGGCGAGGAGGA
AGAGGAAGAGGAGGGGGGTGAGATTGGGCCAGGCATGAGAGGGCAAGACG
GTGGGGGTCAGGATGCAACTTTTTCTTCTTTGTGTGGGCTATTTCATTTT
GCGGTAGCCTGGTAGGGTTGAGGTTAGGATTAGGGTTAGGTTTGGGGGTT
TTGTGGTCTACGGCACGGCGAGTGGTAAGTCTTGATCTTTGTTCAGCAGT
ATAGGGTTAGGGGTTTGTATGGTGTACAGTATGGTACAGTAGTGCTGCAA
CAGCGCCGTGTGACATGCAGTGCCAATGATGCTTTATAGATGCTTCGATG
AAGATACTTTGATGAAGATACCCTTGAGTTCACTCGACATGTGGCTGTGC
TGTGCTATGTTGCGATCGCAAACCTTGCCCCAACCCTAACCCTAGCACTA
GCACTAGCCCTAACACTATCACCGGGTGAACTGTGGCTGGGACCTACTCT
GTCGGTGCTCATGTCCTATGTGTGGGGGGTGGTTGGTGGTGCCTTGGCGA
TTATGCTTGTGATGATGGGGATGCCGAACCATGCCTCTGGCAAAATACAC
CTATGACGGACGGCAATTGCAGGAGGCGAGGTGAGCGTGGCATGGCATGG
CAGGGTGGGGGTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10894:157..2921+

>mRNA_D-mesarthrocarpus_Contig10894.1.1 ID=mRNA_D-mesarthrocarpus_Contig10894.1.1|Name=mRNA_D-mesarthrocarpus_Contig10894.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10894:157..2921+ (Discosporangium mesarthrocarpum MT17_79)
ATGGACATCATCATCAACTCGCTCTACAAGAACAAGGACATATTCCTGCG
TGAGCTCATCTCCAATGCATCAGACGCCCTAGACAAGATCCGATTCCTCT
CAGTCTCAGACTCGGCTGCCCTGGAGGCCAACAAGGACCTGGGCATCCAC
ATCTCTGCTGACAGTGACAAGAGGACACTGACAATCCGGGACGGTGGGGT
GGGCATGACCAAGGCTGACCTCATCTCCAACCTGGGCACCGTAGCGCGAT
CAGGGACCACCAACTTTGTGGAGGCCCTCACTGAGACTGGGGACCTCTCC
CTGATCGGCCAGTTTGGGGTTGGGTTCTACTCAGTCTACCTTGTTGCAGA
CAAAGTGCAGGTTATCTCCAAGCACAATGATGACGACCAGCACATTTGGG
AGTCCACTGCTGACAGCACCTTCATTGTGTCCAAGGACCCAAGGGGGAAC
ACTCTCGGCCGGGGGACAGAGATTGTGCTGCATCTCAAGGAGGACGCGGG
TGAGTTCCTCTCTGAGGACCGCCTGAAGGGGCTCATTCACCGCTACAGCG
AATTTATCACCTTCCCCATCTACCAGCTCGTGGAGAGGGAGGAGGAGGTG
GAGGTGGATGAAGAGGAGGCGGGCGAGGAGGAAGAGGAAGAGGAGGGGGG
TGAGATTGGGCCAGGCATGAGAGGGCAAGACGGTGGGGGTCAGGATGCAA
CTTTTTCTTCTTTGTGTGGGCTATTTCATTTTGCGGTAGCCTGGTAG
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