mRNA_D-mesarthrocarpus_Contig10884.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10884.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10884.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10884.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10884contigD-mesarthrocarpus_Contig10884:211..919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size711
Hectar predicted targeting categoryother localisation
Exons1
Cds size699
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789219.7731922-CDS-D-mesarthrocarpus_Contig10884:210..9091680789219.7731922-CDS-D-mesarthrocarpus_Contig10884:210..909Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10884 211..909 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789219.7878807-UTR-D-mesarthrocarpus_Contig10884:909..9191680789219.7878807-UTR-D-mesarthrocarpus_Contig10884:909..919Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10884 910..919 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10884.1.1prot_D-mesarthrocarpus_Contig10884.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10884 211..909 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10884.1.1

>prot_D-mesarthrocarpus_Contig10884.1.1 ID=prot_D-mesarthrocarpus_Contig10884.1.1|Name=mRNA_D-mesarthrocarpus_Contig10884.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=233bp
MKGKQDPGGSSHGNDPPGGQAPHSMNPMASTPVQRPYPPYVFTPRQLEVL
KAQINRFRSLAQRLDRADADRAAYVSRREANAAARASSMNMGQMASLPGG
ASAGGPSTAAAMAAAGKKNLQLPGTPQQSPRGGRWANGAPVTATPPNLRP
WSSPRTGPLAPVAALGPSPPGTMTPSAAQGLPSPPLGAGGINTPLRPTQP
GSTPRTMVPGEPARAGGRISATMLAKGLAAGSA
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mRNA from alignment at D-mesarthrocarpus_Contig10884:211..919-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10884.1.1 ID=mRNA_D-mesarthrocarpus_Contig10884.1.1|Name=mRNA_D-mesarthrocarpus_Contig10884.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=709bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10884:211..919- (Discosporangium mesarthrocarpum MT17_79)
GAAGAAAACCATGAAGGGGAAGCAGGATCCTGGTGGGTCCTCCCACGGAA
ACGATCCACCGGGAGGCCAAGCCCCTCACTCGATGAACCCCATGGCGTCC
ACTCCCGTGCAAAGACCATACCCTCCGTACGTATTTACCCCTCGGCAGCT
CGAGGTCCTCAAGGCACAGATAAATCGCTTCCGATCCCTCGCACAGCGGC
TTGATAGAGCTGATGCCGATCGAGCAGCCTACGTTTCCCGGCGTGAGGCC
AATGCAGCAGCTCGAGCCTCGAGCATGAACATGGGGCAGATGGCCTCGCT
GCCTGGGGGTGCTTCTGCAGGGGGCCCCTCCACTGCCGCTGCCATGGCGG
CCGCGGGGAAGAAAAACCTCCAGCTCCCTGGGACGCCTCAACAAAGCCCT
AGGGGTGGGCGCTGGGCCAATGGGGCGCCAGTAACGGCCACCCCCCCAAA
CCTACGACCCTGGTCCAGCCCTCGAACAGGACCGCTTGCCCCGGTCGCGG
CCCTCGGCCCTTCTCCGCCTGGAACCATGACCCCTTCCGCGGCGCAGGGC
TTGCCTTCGCCTCCCTTGGGGGCAGGTGGGATAAACACACCGCTGAGGCC
GACCCAGCCCGGATCGACCCCGAGGACCATGGTGCCAGGCGAGCCAGCCA
GGGCGGGAGGGAGGATTTCCGCGACTATGCTCGCCAAGGGCCTGGCCGCG
GGATCGGCA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10884:211..919-

>mRNA_D-mesarthrocarpus_Contig10884.1.1 ID=mRNA_D-mesarthrocarpus_Contig10884.1.1|Name=mRNA_D-mesarthrocarpus_Contig10884.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=699bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10884:211..919- (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGGGAAGCAGGATCCTGGTGGGTCCTCCCACGGAAACGATCCACC
GGGAGGCCAAGCCCCTCACTCGATGAACCCCATGGCGTCCACTCCCGTGC
AAAGACCATACCCTCCGTACGTATTTACCCCTCGGCAGCTCGAGGTCCTC
AAGGCACAGATAAATCGCTTCCGATCCCTCGCACAGCGGCTTGATAGAGC
TGATGCCGATCGAGCAGCCTACGTTTCCCGGCGTGAGGCCAATGCAGCAG
CTCGAGCCTCGAGCATGAACATGGGGCAGATGGCCTCGCTGCCTGGGGGT
GCTTCTGCAGGGGGCCCCTCCACTGCCGCTGCCATGGCGGCCGCGGGGAA
GAAAAACCTCCAGCTCCCTGGGACGCCTCAACAAAGCCCTAGGGGTGGGC
GCTGGGCCAATGGGGCGCCAGTAACGGCCACCCCCCCAAACCTACGACCC
TGGTCCAGCCCTCGAACAGGACCGCTTGCCCCGGTCGCGGCCCTCGGCCC
TTCTCCGCCTGGAACCATGACCCCTTCCGCGGCGCAGGGCTTGCCTTCGC
CTCCCTTGGGGGCAGGTGGGATAAACACACCGCTGAGGCCGACCCAGCCC
GGATCGACCCCGAGGACCATGGTGCCAGGCGAGCCAGCCAGGGCGGGAGG
GAGGATTTCCGCGACTATGCTCGCCAAGGGCCTGGCCGCGGGATCGGCA
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