mRNA_D-mesarthrocarpus_Contig10879.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10879.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10879.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: D8LEB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB5_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.080e-36
Identity = 93/272 (34.19%), Postives = 150/272 (55.15%), Query Frame = 3
Query:  276 FFYDLYVSSPRPWGQIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFHIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECE------WSPQAIVTLLSEDLFSDGNLPGTGYVLVGNKL--AGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKF 1067
            FF   + S+P P+ Q+ +L+L + LV   N+    D    L+  ++   S   IL+FLIVFRTNQ+Y+R+W+ R  WG +   C  L    +  + D  +A+RI    + F Y  KQ LR   L  +E+  V+DA EV+ I+         +  + +   + + L       GT  V  G  +  + +   F  M +++ +   P  FR++LHM+T++YLLVLP+ SY   G +++L  ++T++LML LQIA+  L DPFG D+ DL++D+F
Sbjct:   22 FFAVFWRSTPHPFAQMTMLLLSSALVATLNDERVLDAGLHLS--SNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISVTFAYVVKQILRREQLFADEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCIKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVR-NTPQPDCFRVMLHMFTLLYLLVLPVISYDTLGYFVVLEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRF 290          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A2T0SUJ0_9BACT (Putative membrane protein n=2 Tax=Spirosoma TaxID=107 RepID=A0A2T0SUJ0_9BACT)

HSP 1 Score: 104 bits (259), Expect = 8.380e-22
Identity = 72/267 (26.97%), Postives = 142/267 (53.18%), Query Frame = 3
Query:  318 QIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
            ++GI++++ V+V+ T E+   D + + T P+S   +  ++L+ L+++RTN AY R+++ R+ WG LV +   LA   ++++  D    R+FF   I  FP+A K HLR  + V +EL  + D N        ++ P  + +LL   SE L+ +G L  + ++ +  +L  ++       +IK     P  + + + ++  +Y+ VLP +         +   +LTS++++ L++   E+ DPFG D+ DL + +   +I   V  ++
Sbjct:   28 RLGIVLIY-VVVVTTVELHYFDIRLKDT-PSSFLSAMGILLSLLLIYRTNTAYDRFYEGRTAWGALVNNSRNLALYFNAVLPADRHEDRLFFAKMISNFPFALKNHLRGSTSV-DELELLTDENSKTLA-RFDYKPGGVSSLLWNRSEGLYREGMLSTSQHINLNQRLTALMDVAGICDRIK-STPIPFSYNLFIKLFITLYVAVLPFTIIQAFEYMTIPAVLLTSYILVGLELIGEEIEDPFGVDRNDLPLSQISQLIRVNVHDIL 289          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI00037C534A (hypothetical protein n=2 Tax=Spirosoma TaxID=107 RepID=UPI00037C534A)

HSP 1 Score: 104 bits (259), Expect = 8.520e-22
Identity = 68/266 (25.56%), Postives = 141/266 (53.01%), Query Frame = 3
Query:  327 ILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSS-PAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
            I++L  VLV+   E+   D + + T P S  G+  ++L+ L++FRTN AY R+++ R  WG LV +C  LA   +++   D +  R+FF   I  FP+A + HLR    + ++L       E+  ++E +  P  + + L   +E L  +G L  + ++ +   L  ++   +C V  ++  +  P  +++ + ++ ++Y+ VLP +     G   +   ++TS++++ L++   E+ +PFG ++ DL + +   +I   V  +++
Sbjct:   30 IIVLIYVLVVTVVELNYVDLRLKDT-PASFLGAMGILLSLLLIFRTNTAYDRFYEGRRTWGVLVNNCRNLAIYYNAVFPADDVENRLFFARAIANFPFALRNHLRDVKTM-DDLEETEGIAEMQSLEEFDHKPAGVSSQLRMRTETLHRNGYLSNSQHINMNGYLTSLMD--VCGVCERIKSTPIPFSYQLFIRLFILLYVAVLPFTIIDVYGYLTIPAVVVTSYILVGLEMIGEEIEEPFGLERNDLPLSQLSQLIRVNVHDILQ 291          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A401U5Y3_9BACT (Membrane protein n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401U5Y3_9BACT)

HSP 1 Score: 102 bits (253), Expect = 5.440e-21
Identity = 73/269 (27.14%), Postives = 133/269 (49.44%), Query Frame = 3
Query:  324 GILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLS---EDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMRSRA 1115
            G+L++  +   V+  ++    Q E  L +S+     ++L+ L+VFRTN AY R+W+ R QWG LV +   LA L+ + + ++    R +F  HI  F  A K+HLR + +  EEL H LD+ E++ ++  +  P  + TL+      ++  G L     + V      ++       +IK     P  + + + ++  +Y L+LP   ++D G + +   +   F ML L++ + E+ +PFG D  DL        I K V +++   +
Sbjct:   29 GVLLIGIIASAVSFSMYFF--QIEPRLNSSIFSLLGIVLSILLVFRTNTAYDRWWEGRKQWGSLVNNTRTLASLLQASLPNNDKESRFYFAKHIANFCIALKEHLR-KGVKTEELIH-LDSTELNELNVKQHKPGYLATLIYGKIHTIYRAGALTDADLINVKQHYFALIDVMGACERIK-KTPIPFSYSVYIKIFVSVYGLILPFGLFNDFGFYAIPLTMFIFFAMLGLELMAEEIEEPFGLDCNDLPTGDIALTIKKNVFEILEQES 292          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI00168B7446 (bestrophin family protein n=1 Tax=Spirosoma validum TaxID=2771355 RepID=UPI00168B7446)

HSP 1 Score: 101 bits (252), Expect = 7.880e-21
Identity = 69/268 (25.75%), Postives = 142/268 (52.99%), Query Frame = 3
Query:  318 QIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
            ++G++ ++ V+V +  E+F  D + + T P S  G+  ++L+ L++FRTN AY R+++ R  WG LV +C  LA   ++++    +  R FF   I  FP+A K HLR +S +  EL  V +    D +   +  P  +   L   +E L+ +G++  + ++ +   L  ++       +IK     P  + + + ++ ++Y+ +LP +     G   +   ILTS++++ L++   E+ +PFG ++ DL +++   +I   V  +++
Sbjct:   28 RLGVVAIYVVVVTI-GEMFYTDLRFKDT-PASFLGAMGILLSLLLIFRTNTAYDRFYEGRQAWGTLVNNCRNLAIYFNAVLPQGDMESRAFFAKSISNFPFALKNHLRDQSGI-NELEMVEEGERRD-LRNFDHKPAGVSNQLWVKTEILYREGHISESQHINLNQYLTALMDVCGICERIK-STPIPFSYMLFIKLFIMLYVSLLPFTIIAAFGYLTIPAVILTSYVLVGLEMIGEEIEEPFGLERNDLPLNQLSQLIRVNVHDILQ 290          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI0019C5FC8A (Bestrophin family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI0019C5FC8A)

HSP 1 Score: 100 bits (250), Expect = 1.490e-20
Identity = 74/260 (28.46%), Postives = 131/260 (50.38%), Query Frame = 3
Query:  345 VLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSS-PAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
            V V+   E+   D + + T P S   +  V+L+ L++FRTN AY R+++ R  WG LV  C  LA L ++++ +D    R FF   I  F +A K  LR    + EEL    +  + D I   E  P  +   L   +E L+ DG +     + +   L  ++   +C V  ++  +  P  + + + ++ I+YL+V+P       G   +   ILTS++++ L+I   E+ DPFG ++ DL +++   +I   V ++M+
Sbjct:   36 VTVVTVVEIRYLDMRLKDT-PASFISALGVLLSLLLLFRTNTAYDRFYEGRMAWGTLVNTCRNLAILYNAILPEDDQRNRQFFVKTISNFAFALKNRLRDTQSL-EELDETDEGEKGDLI-HWEHLPSGVANQLRVRTEQLYRDGRITDAQVINLNAPLQALMD--VCGVCERIKSTPIPFSYSLFIKLFIIMYLMVIPFIIIDAYGYLAIPASILTSYILVGLEIIGEEIEDPFGLERNDLPLNQLSQMIRVSVHEIMQ 290          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A239EST8_9BACT (Putative membrane protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239EST8_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 5.440e-20
Identity = 69/239 (28.87%), Postives = 114/239 (47.70%), Query Frame = 3
Query:  432 VILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDE-CE-------WSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMRS 1109
            VIL   +V RTN AY R+W+ R  WG LV DC  LA  +S+ V +D    R+FF   I    +A K HLR+  +V           E+DF DE C+         P  I  +L E   D+   G +      ++  ++ G         +IK     P  + + +  +  IY + LP++   + G W ++  ++  + ++S+++ S E+ DPFG D  DL +D+ C  I K + ++  +
Sbjct:   63 VILGLFLVLRTNTAYDRWWEGRKLWGQLVNDCRQLAIKISTFVPEDAKEDRLFFKKMIPNVTFAMKHHLRNSRMV----------GEMDFYDEKCKDRIISSTHRPNIINKILMERVMDMNKRGLITADKLFILDKEIKGFTDIIGACERIK-STPIPYSYSMFIKKFLFIYCITLPMTFIGEFGYWSIILVVVAFYFLMSVELISEEIEDPFGRDINDLPLDELCVKIKKNIIEIFNN 290          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A6C0GQF1_9BACT (Bestrophin n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GQF1_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 7.100e-20
Identity = 73/263 (27.76%), Postives = 124/263 (47.15%), Query Frame = 3
Query:  342 TVLVIVTNEVFC----GDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
            T++V +   +FC       Q E+   +S+     ++L+ L+VFRTN AY R+W+ R  WGGLV +   LA ++ SM+    +  R +F  HI  F  A K+HLR+  +  EEL H LD  E+    + +  P  I+  L E    L     + G   + +   L           +IK     P  + I + ++ ++Y L+LP     + G + +  E+L  +  + +++ + E+ DPFG D  DL        I   V +++
Sbjct:   29 TLMVGIVTAIFCVLVIDVFQFEIRFQSSLFSLLGIVLSILLVFRTNTAYDRWWEGRRLWGGLVNNSRDLALMMHSMLDRGNMEDRNYFAKHIANFAVALKEHLRN-GVKLEELYH-LDEREIVMYKQRQHIPNQIIASLYERTQHLCRSEAITGFDSIPIRTHLQAFTDILGACERIK-RTPIPFSYSIYIKIFIMLYALILPFGLIEEFGYFTIFLEMLLFYAFIGIELMAEEIEDPFGLDCNDLPTGTIATTIKNNVYEIL 288          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A840TR74_9BACT (Putative membrane protein n=1 Tax=Rhabdobacter roseus TaxID=1655419 RepID=A0A840TR74_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 7.220e-20
Identity = 75/268 (27.99%), Postives = 130/268 (48.51%), Query Frame = 3
Query:  315 GQIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLV-SSMVKDDGIAQRIFFHIIA-FPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSEDL---FSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
            G + +  L T+  +V  E+F      E+ +P+++     ++L+ L+VFRTN AY R+W+ R QWG LV +C  LA  + ++  ++D   +R    +IA F  A K+HLR  + + EEL HV  + EV+   +    P  IVTL+ + +   +  G + G     +   L  +L       +IK     P  + + + +  + Y L+LP     D G + +       F  + +++  +E+ DPFG D  DL      H I   V +++
Sbjct:   29 GTLTVAALTTLFCVVVIELF----NSEIHIPSNIFSLLGIVLSILLVFRTNTAYDRWWEGRKQWGSLVNNCRNLAVTIHATFPEEDKSTRRELAILIANFCIALKEHLRKGTRM-EELIHV-SSREVEAYQKRNHIPNYIVTLIHQKVQAVYRSGAISGADLRNLKPHLQSLLDIAGACERIK-KTPIPFSYSVYIKLLILSYSLMLPFGLIRDFGYFTIPLVTFIFFTFVGIEMMGAEIEDPFGLDCNDLPTGDIAHTIKNNVFEIL 289          
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A518IXD2_9BACT (Bestrophin, RFP-TM, chloride channel n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518IXD2_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 1.670e-19
Identity = 74/240 (30.83%), Postives = 115/240 (47.92%), Query Frame = 3
Query:  405 PTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALA-DLVSSMVKDDGIAQRIFFHIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMC-----MVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQ 1097
            P+   G  + +L  L+VFRTN AYSR+W+AR  WGGLV  C  L   L SS    D    R    I+AFP A + HLR    + +E    L+      +   +  PQAI   L +   D    G + G    ++  +L  ++   +C     ++K ++  S    +R+       I+L+ LP +  HD   W L   I+T++ ML L+  +  +  PFG+D+ DL ++  C  ID  V +
Sbjct:   47 PSQFHGVLSFVLGLLLVFRTNTAYSRWWEARILWGGLVNACRNLGIKLTSSDGLTDETRSRALQLIVAFPVALRCHLREE--IDDETRESLEL----LVGRAKHIPQAIAAQLYQIVWDAKRSGRIDGDELRVLDAELLRLMD--ICGGCERILKTRIVKS----YRVFARQCVGIFLVSLPWAIVHDFRIWTLFITIITAYFMLGLETVAEHVETPFGYDEDDLDLESLCATIDTTVHE 274          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEB5_ECTSI2.080e-3634.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T0SUJ0_9BACT8.380e-2226.97Putative membrane protein n=2 Tax=Spirosoma TaxID=... [more]
UPI00037C534A8.520e-2225.56hypothetical protein n=2 Tax=Spirosoma TaxID=107 R... [more]
A0A401U5Y3_9BACT5.440e-2127.14Membrane protein n=1 Tax=Chryseotalea sanaruensis ... [more]
UPI00168B74467.880e-2125.75bestrophin family protein n=1 Tax=Spirosoma validu... [more]
UPI0019C5FC8A1.490e-2028.46Bestrophin family protein n=1 Tax=Bacteroidetes ba... [more]
A0A239EST8_9BACT5.440e-2028.87Putative membrane protein n=1 Tax=Ekhidna lutea Ta... [more]
A0A6C0GQF1_9BACT7.100e-2027.76Bestrophin n=1 Tax=Rhodocytophaga rosea TaxID=2704... [more]
A0A840TR74_9BACT7.220e-2027.99Putative membrane protein n=1 Tax=Rhabdobacter ros... [more]
A0A518IXD2_9BACT1.670e-1930.83Bestrophin, RFP-TM, chloride channel n=4 Tax=Rosis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10879contigD-mesarthrocarpus_Contig10879:3..2846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LEB5
PFAMsBestrophin
Model size1116
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons5
Evalue4.92e-38
EggNOG OGsCOG3781@1|root,2RXRZ@2759|Eukaryota
DescriptionBestrophin, RFP-TM, chloride channel
Cds size891
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10879.1.2prot_D-mesarthrocarpus_Contig10879.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10879 3..2191 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789219.58436-CDS-D-mesarthrocarpus_Contig10879:2..1511680789219.58436-CDS-D-mesarthrocarpus_Contig10879:2..151Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10879 3..151 -
1680789219.603342-CDS-D-mesarthrocarpus_Contig10879:546..8261680789219.603342-CDS-D-mesarthrocarpus_Contig10879:546..826Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10879 547..826 -
1680789219.614827-CDS-D-mesarthrocarpus_Contig10879:1486..15691680789219.614827-CDS-D-mesarthrocarpus_Contig10879:1486..1569Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10879 1487..1569 -
1680789219.6296844-CDS-D-mesarthrocarpus_Contig10879:1812..21911680789219.6296844-CDS-D-mesarthrocarpus_Contig10879:1812..2191Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10879 1813..2191 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789219.641536-UTR-D-mesarthrocarpus_Contig10879:2191..21921680789219.641536-UTR-D-mesarthrocarpus_Contig10879:2191..2192Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10879 2192..2192 -
1680789219.6518385-UTR-D-mesarthrocarpus_Contig10879:2623..28461680789219.6518385-UTR-D-mesarthrocarpus_Contig10879:2623..2846Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10879 2624..2846 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10879.1.2

>prot_D-mesarthrocarpus_Contig10879.1.2 ID=prot_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=297bp
MEKVLSVPSWKEHRVASFFYDLYVSSPRPWGQIGILMLWTVLVIVTNEVF
CGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTD
CCALADLVSSMVKDDGIAQRIFFHIIAFPYACKQHLRSRSLVYEELSHVL
DANEVDFIDECEWSPQAIVTLLSEDLFSDGNLPGTGYVLVGNKLAGMLKS
FMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEIL
TSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMRSRA
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mRNA from alignment at D-mesarthrocarpus_Contig10879:3..2846-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10879.1.2 ID=mRNA_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2844bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10879:3..2846- (Discosporangium mesarthrocarpum MT17_79)
AAAATACAAGCGCTCTATGGCTCCGTTTAGGAAAGAAATCCTTCGACCAG TCGTAGGGAGGGGGTCACTGGTTTGGACGGAGTAAGTGGGCTGACCACAT TCCCAAACAAACTTGCACCCTGAACGAGCTTCCCCGCTGGACTAGTTTTT GGCAGAGCCGCAGCTCCCCTTTCCCGCCCACCAGTTCGTGCCTCGCGGGT ATCCTGCTCATTTGATCCGCAAGGTGACAACCGCTTGCTCCAACTGCAAC ACACTCACAGCACAAGGCTGACTATCGCTTGCCAAAGCACCGCGCTCACA TAAAAAACAGTGCACGTTTACCGTTGGAGCACGGGGATGATTTCTGGTTA CTCGACCTTGGGCCCATCGTTGTTCCTCGTGTTAGAAGAGTGGTCGTTTC CTCCGCTTCAGAGATATTCTGTGCGGACAAATAATGATGATCCCTTCGGA CCAAGTTTGCCGGGAGTTTTTTTTACGGCCCTACCGCGTTAAGCTCCCTT GCAATAGGTGAACCGTCCAGGCCAGTTATGGTGATCCGTCTTTCGCCTAG GTTTGAGAGTAATTCAAGTGGTGCACGCTCACATTTGGATGCATGTTACG TGTGCAAGCTCACTCTGTGTGTGCCACCACATCCTCTTCATCCTGCCTGT ACAGGATGGAGAAAGTGCTAAGCGTTCCTTCGTGGAAGGAACACCGAGTG GCCTCGTTCTTTTACGACTTGTACGTGTCATCGCCCCGTCCATGGGGTCA GATCGGTATTCTCATGCTCTGGACCGTTCTTGTCATCGTCACGAATGAGG TCTTCTGTGGAGATGGACAATGCGAGCTCACCCTACCAACCAGCGTTGCT GGCTCCACCACTGTTATTTTGACATTCCTCATCGTCTTCAGGACTAATCA GGCCTACTCCAGGTACTGGGATGCCCGCAGTCAATGGGGGGGACTGGTGA CCGATTGCTGCGCTCTTGCCGACTTAGTTTCTTCAATGGTGAAGGACGAC GGCATTGCACAGCGGATTTTCTTCCACATTATCGGTGAGTTGAATGTTCG TCGTGCCGTCATCCGCAGCAGCGGTGCTGACCTTGTTCCACGTGTACCCG TGATCGTTTAATTGTGTGGGGAATGCTTAAAGACCCGCCGTTCCAAACCC CTGACAAGCACATAGTGAATGATCTCCTGTTCTTGGCGGGGACTGACCCC AAAAAATATGTCACTCTTTTTGGCCTGTGCGGGGTTCTGATGCTCTGTGG GTTTCGGTCGGTTCCAATTCGGCCCAGCGTTTCCGTACGCCTGTAAGCAG CACCTGAGGAGCAGGTCCTTGGTGTATGAGGAACTAAGTCACGTGCTTGA CGCAAATGAGGTGAGACAGTCTGTGCAAATCGATTTGCCGATGAGAGCTT TGCTGCTGCTTCGCCAGTATCACAGTCACCCCCTGCGGCGGCGTTTTTCA TGGCTAATGAGATTGTGAGCTTCCCGTCCTTTGAATTTATTTCCAAGGAA ATGGCGCTTGTACTTGTTGGAAAGTAGGCACACCATACGTCATTGAGCGC TTCTTTTTGCAGTTCTCTCGACCATTTTCGTACTCCAAGGGGAAGTATAT GCTCTGGAGCAGAGAGGTGCTTGCATTCTGTTTTGTTTTTCTCGCCTTTC CATTTATGGCAGAGCTACAGGGCCATTGTGTTCAAGGGGCTGCTTCAATA CCTTGGGGGGGATCATAGGGCCACCCTTTCATTCTCTGCACTGTAACTGC ACTTTTTATTTGTTTGTTTTTGGTCTTGCTCAGATTCTTTGATACAGTCC TCTAATCCCAAACCCCTCCCCACTTACCCATAACAATATATGGCGCATCA CTATCCCTAACCCTCCTGTAGTACCAAGAAGTGACTATTTCTTCCACTGA GCTGTCTTGCTTGCTTCTTTGATGTAACCGCCCTTGTACCATATGGTCTA ATATCGAGGTCTCATCTGGCGTGTGACTATGTTTATTCTTAGTTGTCATG ACATTTGTTTGCTGCTTCAGGTGGACTTCATCGATGAATGCGAGTGGAGC CCACAAGCAATTGTCACACTGCTGAGTGAAGACCTTTTTAGTGATGGGAA CCTTCCCGGAACAGGCTATGTTCTGGTAGGAAATAAACTTGCTGGCATGT TGAAAAGCTTTATGTGCATGGTCAAGATCAAGGTGGACGGGAGCTCCCCA GCAATTTTCCGCATTCTCTTGCACATGTACACCATCATCTACCTCTTGGT CCTCCCACTCTCTTCCTACCACGATCAGGGTCGGTGGATTCTTCTCACAG GTGAGTCCGTGTTATCAGGTGGAGGAGTGACCCCAAGCCTTTTTTGCTGA TGATCCAACCACAATGTAGGGTTTGGGTAGCCACAGGCAATGTGCCAGTG TCATTCATTTTGTTGAGGCAGAACTCTGCAACTCTTGTCCTGTAAGTACA TGCCAGGTGCTTGTTTCCCCTTTTTCCACGGCTTGGGATAAGCCCCACAG AAATTTAACTGATGGTATATCAGCAACCACCTCAGTTTCTTCCTGCAGTT CTCTCTCACCCTCTTCCCACCCCCCCCCTTCTCTCTCTCCCACCCTTTGC TTAGAGAGTTTACACATTGTTTTCTTCCTCTGAAAACTACCCTCTGACAA TCCAAACCCCAAACACCTGCCCTCTGCTTGTTTGCTGGAGAGCAGAGATC TTGACCTCGTTCCTGATGCTCAGCCTCCAGATTGCTTCCTCAGAGCTGGT GGACCCGTTTGGGTTTGACAAAGTTGACCTCAAAATGGACAAGTTCTGCC ACGTGATTGACAAGATGGTTCAGCAAGTCATGAGGAGCCGAGCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10879:3..2846-

>mRNA_D-mesarthrocarpus_Contig10879.1.2 ID=mRNA_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=891bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10879:3..2846- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGAAAGTGCTAAGCGTTCCTTCGTGGAAGGAACACCGAGTGGCCTC
GTTCTTTTACGACTTGTACGTGTCATCGCCCCGTCCATGGGGTCAGATCG
GTATTCTCATGCTCTGGACCGTTCTTGTCATCGTCACGAATGAGGTCTTC
TGTGGAGATGGACAATGCGAGCTCACCCTACCAACCAGCGTTGCTGGCTC
CACCACTGTTATTTTGACATTCCTCATCGTCTTCAGGACTAATCAGGCCT
ACTCCAGGTACTGGGATGCCCGCAGTCAATGGGGGGGACTGGTGACCGAT
TGCTGCGCTCTTGCCGACTTAGTTTCTTCAATGGTGAAGGACGACGGCAT
TGCACAGCGGATTTTCTTCCACATTATCGCGTTTCCGTACGCCTGTAAGC
AGCACCTGAGGAGCAGGTCCTTGGTGTATGAGGAACTAAGTCACGTGCTT
GACGCAAATGAGGTGGACTTCATCGATGAATGCGAGTGGAGCCCACAAGC
AATTGTCACACTGCTGAGTGAAGACCTTTTTAGTGATGGGAACCTTCCCG
GAACAGGCTATGTTCTGGTAGGAAATAAACTTGCTGGCATGTTGAAAAGC
TTTATGTGCATGGTCAAGATCAAGGTGGACGGGAGCTCCCCAGCAATTTT
CCGCATTCTCTTGCACATGTACACCATCATCTACCTCTTGGTCCTCCCAC
TCTCTTCCTACCACGATCAGGGTCGGTGGATTCTTCTCACAGAGATCTTG
ACCTCGTTCCTGATGCTCAGCCTCCAGATTGCTTCCTCAGAGCTGGTGGA
CCCGTTTGGGTTTGACAAAGTTGACCTCAAAATGGACAAGTTCTGCCACG
TGATTGACAAGATGGTTCAGCAAGTCATGAGGAGCCGAGCT
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