mRNA_D-mesarthrocarpus_Contig10879.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: D8LEB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB5_ECTSI) HSP 1 Score: 149 bits (377), Expect = 2.080e-36 Identity = 93/272 (34.19%), Postives = 150/272 (55.15%), Query Frame = 3
Query: 276 FFYDLYVSSPRPWGQIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFHIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECE------WSPQAIVTLLSEDLFSDGNLPGTGYVLVGNKL--AGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKF 1067
FF + S+P P+ Q+ +L+L + LV N+ D L+ ++ S IL+FLIVFRTNQ+Y+R+W+ R WG + C L + + D +A+RI + F Y KQ LR L +E+ V+DA EV+ I+ + + + + + L GT V G + + + F M +++ + P FR++LHM+T++YLLVLP+ SY G +++L ++T++LML LQIA+ L DPFG D+ DL++D+F
Sbjct: 22 FFAVFWRSTPHPFAQMTMLLLSSALVATLNDERVLDAGLHLS--SNTGRSLQTILSFLIVFRTNQSYNRWWEGRILWGKMHWSCVELTQQAAVWIDDTQLARRIMNISVTFAYVVKQILRREQLFADEMEGVIDAAEVELINNLPPLVMPYYCTEVMRQCIKKGLADSPQAFGTQAVARGIDVPVSQLSVQFADMERVR-NTPQPDCFRVMLHMFTLLYLLVLPVISYDTLGYFVVLEMLVTAYLMLGLQIAADHLEDPFGRDESDLQLDRF 290
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A2T0SUJ0_9BACT (Putative membrane protein n=2 Tax=Spirosoma TaxID=107 RepID=A0A2T0SUJ0_9BACT) HSP 1 Score: 104 bits (259), Expect = 8.380e-22 Identity = 72/267 (26.97%), Postives = 142/267 (53.18%), Query Frame = 3
Query: 318 QIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
++GI++++ V+V+ T E+ D + + T P+S + ++L+ L+++RTN AY R+++ R+ WG LV + LA ++++ D R+FF I FP+A K HLR + V +EL + D N ++ P + +LL SE L+ +G L + ++ + +L ++ +IK P + + + ++ +Y+ VLP + + +LTS++++ L++ E+ DPFG D+ DL + + +I V ++
Sbjct: 28 RLGIVLIY-VVVVTTVELHYFDIRLKDT-PSSFLSAMGILLSLLLIYRTNTAYDRFYEGRTAWGALVNNSRNLALYFNAVLPADRHEDRLFFAKMISNFPFALKNHLRGSTSV-DELELLTDENSKTLA-RFDYKPGGVSSLLWNRSEGLYREGMLSTSQHINLNQRLTALMDVAGICDRIK-STPIPFSYNLFIKLFITLYVAVLPFTIIQAFEYMTIPAVLLTSYILVGLELIGEEIEDPFGVDRNDLPLSQISQLIRVNVHDIL 289
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI00037C534A (hypothetical protein n=2 Tax=Spirosoma TaxID=107 RepID=UPI00037C534A) HSP 1 Score: 104 bits (259), Expect = 8.520e-22 Identity = 68/266 (25.56%), Postives = 141/266 (53.01%), Query Frame = 3
Query: 327 ILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSS-PAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
I++L VLV+ E+ D + + T P S G+ ++L+ L++FRTN AY R+++ R WG LV +C LA +++ D + R+FF I FP+A + HLR + ++L E+ ++E + P + + L +E L +G L + ++ + L ++ +C V ++ + P +++ + ++ ++Y+ VLP + G + ++TS++++ L++ E+ +PFG ++ DL + + +I V +++
Sbjct: 30 IIVLIYVLVVTVVELNYVDLRLKDT-PASFLGAMGILLSLLLIFRTNTAYDRFYEGRRTWGVLVNNCRNLAIYYNAVFPADDVENRLFFARAIANFPFALRNHLRDVKTM-DDLEETEGIAEMQSLEEFDHKPAGVSSQLRMRTETLHRNGYLSNSQHINMNGYLTSLMD--VCGVCERIKSTPIPFSYQLFIRLFILLYVAVLPFTIIDVYGYLTIPAVVVTSYILVGLEMIGEEIEEPFGLERNDLPLSQLSQLIRVNVHDILQ 291
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A401U5Y3_9BACT (Membrane protein n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401U5Y3_9BACT) HSP 1 Score: 102 bits (253), Expect = 5.440e-21 Identity = 73/269 (27.14%), Postives = 133/269 (49.44%), Query Frame = 3
Query: 324 GILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLS---EDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMRSRA 1115
G+L++ + V+ ++ Q E L +S+ ++L+ L+VFRTN AY R+W+ R QWG LV + LA L+ + + ++ R +F HI F A K+HLR + + EEL H LD+ E++ ++ + P + TL+ ++ G L + V ++ +IK P + + + ++ +Y L+LP ++D G + + + F ML L++ + E+ +PFG D DL I K V +++ +
Sbjct: 29 GVLLIGIIASAVSFSMYFF--QIEPRLNSSIFSLLGIVLSILLVFRTNTAYDRWWEGRKQWGSLVNNTRTLASLLQASLPNNDKESRFYFAKHIANFCIALKEHLR-KGVKTEELIH-LDSTELNELNVKQHKPGYLATLIYGKIHTIYRAGALTDADLINVKQHYFALIDVMGACERIK-KTPIPFSYSVYIKIFVSVYGLILPFGLFNDFGFYAIPLTMFIFFAMLGLELMAEEIEEPFGLDCNDLPTGDIALTIKKNVFEILEQES 292
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI00168B7446 (bestrophin family protein n=1 Tax=Spirosoma validum TaxID=2771355 RepID=UPI00168B7446) HSP 1 Score: 101 bits (252), Expect = 7.880e-21 Identity = 69/268 (25.75%), Postives = 142/268 (52.99%), Query Frame = 3
Query: 318 QIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
++G++ ++ V+V + E+F D + + T P S G+ ++L+ L++FRTN AY R+++ R WG LV +C LA ++++ + R FF I FP+A K HLR +S + EL V + D + + P + L +E L+ +G++ + ++ + L ++ +IK P + + + ++ ++Y+ +LP + G + ILTS++++ L++ E+ +PFG ++ DL +++ +I V +++
Sbjct: 28 RLGVVAIYVVVVTI-GEMFYTDLRFKDT-PASFLGAMGILLSLLLIFRTNTAYDRFYEGRQAWGTLVNNCRNLAIYFNAVLPQGDMESRAFFAKSISNFPFALKNHLRDQSGI-NELEMVEEGERRD-LRNFDHKPAGVSNQLWVKTEILYREGHISESQHINLNQYLTALMDVCGICERIK-STPIPFSYMLFIKLFIMLYVSLLPFTIIAAFGYLTIPAVILTSYVLVGLEMIGEEIEEPFGLERNDLPLNQLSQLIRVNVHDILQ 290
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: UPI0019C5FC8A (Bestrophin family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=UPI0019C5FC8A) HSP 1 Score: 100 bits (250), Expect = 1.490e-20 Identity = 74/260 (28.46%), Postives = 131/260 (50.38%), Query Frame = 3
Query: 345 VLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLL---SEDLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSS-PAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMR 1106
V V+ E+ D + + T P S + V+L+ L++FRTN AY R+++ R WG LV C LA L ++++ +D R FF I F +A K LR + EEL + + D I E P + L +E L+ DG + + + L ++ +C V ++ + P + + + ++ I+YL+V+P G + ILTS++++ L+I E+ DPFG ++ DL +++ +I V ++M+
Sbjct: 36 VTVVTVVEIRYLDMRLKDT-PASFISALGVLLSLLLLFRTNTAYDRFYEGRMAWGTLVNTCRNLAILYNAILPEDDQRNRQFFVKTISNFAFALKNRLRDTQSL-EELDETDEGEKGDLI-HWEHLPSGVANQLRVRTEQLYRDGRITDAQVINLNAPLQALMD--VCGVCERIKSTPIPFSYSLFIKLFIIMYLMVIPFIIIDAYGYLAIPASILTSYILVGLEIIGEEIEDPFGLERNDLPLNQLSQMIRVSVHEIMQ 290
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A239EST8_9BACT (Putative membrane protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239EST8_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 5.440e-20 Identity = 69/239 (28.87%), Postives = 114/239 (47.70%), Query Frame = 3
Query: 432 VILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFFH--IIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDE-CE-------WSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVMRS 1109
VIL +V RTN AY R+W+ R WG LV DC LA +S+ V +D R+FF I +A K HLR+ +V E+DF DE C+ P I +L E D+ G + ++ ++ G +IK P + + + + IY + LP++ + G W ++ ++ + ++S+++ S E+ DPFG D DL +D+ C I K + ++ +
Sbjct: 63 VILGLFLVLRTNTAYDRWWEGRKLWGQLVNDCRQLAIKISTFVPEDAKEDRLFFKKMIPNVTFAMKHHLRNSRMV----------GEMDFYDEKCKDRIISSTHRPNIINKILMERVMDMNKRGLITADKLFILDKEIKGFTDIIGACERIK-STPIPYSYSMFIKKFLFIYCITLPMTFIGEFGYWSIILVVVAFYFLMSVELISEEIEDPFGRDINDLPLDELCVKIKKNIIEIFNN 290
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A6C0GQF1_9BACT (Bestrophin n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GQF1_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 7.100e-20 Identity = 73/263 (27.76%), Postives = 124/263 (47.15%), Query Frame = 3
Query: 342 TVLVIVTNEVFC----GDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLVSSMVKDDGIAQRIFF--HIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
T++V + +FC Q E+ +S+ ++L+ L+VFRTN AY R+W+ R WGGLV + LA ++ SM+ + R +F HI F A K+HLR+ + EEL H LD E+ + + P I+ L E L + G + + L +IK P + I + ++ ++Y L+LP + G + + E+L + + +++ + E+ DPFG D DL I V +++
Sbjct: 29 TLMVGIVTAIFCVLVIDVFQFEIRFQSSLFSLLGIVLSILLVFRTNTAYDRWWEGRRLWGGLVNNSRDLALMMHSMLDRGNMEDRNYFAKHIANFAVALKEHLRN-GVKLEELYH-LDEREIVMYKQRQHIPNQIIASLYERTQHLCRSEAITGFDSIPIRTHLQAFTDILGACERIK-RTPIPFSYSIYIKIFIMLYALILPFGLIEEFGYFTIFLEMLLFYAFIGIELMAEEIEDPFGLDCNDLPTGTIATTIKNNVYEIL 288
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A840TR74_9BACT (Putative membrane protein n=1 Tax=Rhabdobacter roseus TaxID=1655419 RepID=A0A840TR74_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 7.220e-20 Identity = 75/268 (27.99%), Postives = 130/268 (48.51%), Query Frame = 3
Query: 315 GQIGILMLWTVLVIVTNEVFCGDGQCELTLPTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALADLV-SSMVKDDGIAQRIFFHIIA-FPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSEDL---FSDGNLPGTGYVLVGNKLAGMLKSFMCMVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQVM 1103
G + + L T+ +V E+F E+ +P+++ ++L+ L+VFRTN AY R+W+ R QWG LV +C LA + ++ ++D +R +IA F A K+HLR + + EEL HV + EV+ + P IVTL+ + + + G + G + L +L +IK P + + + + + Y L+LP D G + + F + +++ +E+ DPFG D DL H I V +++
Sbjct: 29 GTLTVAALTTLFCVVVIELF----NSEIHIPSNIFSLLGIVLSILLVFRTNTAYDRWWEGRKQWGSLVNNCRNLAVTIHATFPEEDKSTRRELAILIANFCIALKEHLRKGTRM-EELIHV-SSREVEAYQKRNHIPNYIVTLIHQKVQAVYRSGAISGADLRNLKPHLQSLLDIAGACERIK-KTPIPFSYSVYIKLLILSYSLMLPFGLIRDFGYFTIPLVTFIFFTFVGIEMMGAEIEDPFGLDCNDLPTGDIAHTIKNNVFEIL 289
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Match: A0A518IXD2_9BACT (Bestrophin, RFP-TM, chloride channel n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518IXD2_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 1.670e-19 Identity = 74/240 (30.83%), Postives = 115/240 (47.92%), Query Frame = 3
Query: 405 PTSVAGSTTVILTFLIVFRTNQAYSRYWDARSQWGGLVTDCCALA-DLVSSMVKDDGIAQRIFFHIIAFPYACKQHLRSRSLVYEELSHVLDANEVDFIDECEWSPQAIVTLLSE---DLFSDGNLPGTGYVLVGNKLAGMLKSFMC-----MVKIKVDGSSPAIFRILLHMYTIIYLLVLPLSSYHDQGRWILLTEILTSFLMLSLQIASSELVDPFGFDKVDLKMDKFCHVIDKMVQQ 1097
P+ G + +L L+VFRTN AYSR+W+AR WGGLV C L L SS D R I+AFP A + HLR + +E L+ + + PQAI L + D G + G ++ +L ++ +C ++K ++ S +R+ I+L+ LP + HD W L I+T++ ML L+ + + PFG+D+ DL ++ C ID V +
Sbjct: 47 PSQFHGVLSFVLGLLLVFRTNTAYSRWWEARILWGGLVNACRNLGIKLTSSDGLTDETRSRALQLIVAFPVALRCHLREE--IDDETRESLEL----LVGRAKHIPQAIAAQLYQIVWDAKRSGRIDGDELRVLDAELLRLMD--ICGGCERILKTRIVKS----YRVFARQCVGIFLVSLPWAIVHDFRIWTLFITIITAYFMLGLETVAEHVETPFGYDEDDLDLESLCATIDTTVHE 274 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10879.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10879.1.2 >prot_D-mesarthrocarpus_Contig10879.1.2 ID=prot_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=297bp MEKVLSVPSWKEHRVASFFYDLYVSSPRPWGQIGILMLWTVLVIVTNEVFback to top mRNA from alignment at D-mesarthrocarpus_Contig10879:3..2846- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10879.1.2 ID=mRNA_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2844bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10879:3..2846- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10879:3..2846- >mRNA_D-mesarthrocarpus_Contig10879.1.2 ID=mRNA_D-mesarthrocarpus_Contig10879.1.2|Name=mRNA_D-mesarthrocarpus_Contig10879.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=891bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10879:3..2846- (Discosporangium mesarthrocarpum MT17_79)back to top |