mRNA_D-mesarthrocarpus_Contig1087.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Match: A0A6H5KT26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT26_9PHAE) HSP 1 Score: 236 bits (602), Expect = 2.560e-65 Identity = 178/477 (37.32%), Postives = 235/477 (49.27%), Query Frame = 1
Query: 22 SPLAASPWFRNLFIEFAQPEDIQR----TVGKG-----GMEGLLEALHEHQKSLGLLDVDESDEDG----------------------VEAEEADRVEDDRDVGRRDLEEAERPAKEIAESAEVKILSEVLTRCCSLLATPVLMTQAQALACVRECILKLASTGAEPALLPHVHRVWRPLMSCLREHLTS-PSRGSSFPLRSSEHFTELMVPQHRQLAANTTLGTSPKTWEALPARRAVILHFLDTVDCLAGVCGDFLSTKITEDLWPVMKVLLARHVFTAASSGEGGA--------------------------------ELEAHRFSGGKVTAA-------------------DLVVVSPSARHPVRGGGTGGGEYRAVQSSLPTS-----RAR-FVDSQVLNRAVTCLDSLCRHEECQLFMTPLARELALLTLPCLSVGAPVTLRQSAKSLFSVLTFLDGDAIWLLLQQTVHEA 1185
S L SPWFR LF+EFA DI R + G G GL++A+ EH++++G D+ E+G EA +A ++ G+++L E + +++AES EVK LSEVL R C LATP L TQA ALAC+R+C+LKLAS GA+ ALLPHVHR WRPLM+ LREHLT PS S HF SP L +RRAV+LH LDTVD L VCGDFLS+K++EDLWP++K+LL ++ AA GGA F G T+ L+ V P PV G GGG + S+ +S R R + +V+ R + L+ LC ++C+ FMTPLARE+A+ LPCLS ++ A++LF L FLDGD +WLLL QT+ A
Sbjct: 1151 SALVESPWFRQLFVEFADASDILRAEENSSGAGDRAQSATSGLVKAVKEHREAMGYDVPDDDSEEGRVESDTANPEYEKTKAKWREIEEEARKAAGQAEEESEGQQELPEPDAEGRKMAESEEVKTLSEVLARSCHFLATPSLETQALALACMRDCVLKLASAGADAALLPHVHRAWRPLMASLREHLTPLPSSVGSGGDHGDGHFE-----------------ASP-----LSSRRAVVLHSLDTVDALVDVCGDFLSSKVSEDLWPLLKLLLLQY---AAFKTPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXPSQSISAPGELFLVGSKTSGRTNDTGNGIHVDGDGSGLNSLLAVPPGG--PVGGVHGGGGTNGPMTGSVASSGKGGRRGRDTMGEKVVARTLESLERLCSSQQCERFMTPLAREVAIAALPCLSSAGATSILSRAEALFRRLAFLDGDGVWLLLMQTMDTA 1600
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Match: A0A835Z555_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z555_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.000e-31 Identity = 109/336 (32.44%), Postives = 149/336 (44.35%), Query Frame = 1
Query: 250 LEEAERPAKEIAESAEVKILSEVLTRCCSLLATPVLMTQAQALACVRECILKLASTGAEPALLPHVHRVWRPLMSCLREHLTSPSRGSSFPLRSSEHFTELMVPQHRQLAANTTLGTSPK------TWEALPARRAVILHFLDTVDCLAGVCGDFLSTKITEDLWPVMKVLLARHVFTAASSGEGGAE------------------LEAHRFSGGKVTAADLVVVSPSARHPVRGGGTGGGEYRAVQSSLPTSRARFVDSQVLNRAVT-----CLDSLCRHEECQLFMTPLARELALLTLPCLSVGAPVTLRQSAKSLFSVLTFLDGDAIWLLLQQ 1170
E ER K +SAEV +L E+L R ATP L QA A A V +C+ KLA+T + LLP VHR W LM+ RE AA LG+ K E + RRA +L V L +CGDFLS K+TE+LWPV++ LLAR + + A L ++ G V + + ++ +AR G G A + R Q ++ V CL +L R +C+ +M PLA+++A +TLP LS APVTLR + LF L LDGD +W++L Q
Sbjct: 915 FEREERANKAAQDSAEVAVLREILERAQYFAATPRLRCQALAAAAVGDCLAKLAATRVDTVLLPAVHRAWPSLMARFREQAR---------------------------AAGAALGSGGKGAVEAAEMEGVAQRRAALLSVARAVAALTDLCGDFLSLKVTEELWPVLRALLARRLPVLLKAPAAAAXXXXXXXXXXXXXXRDAFGLLGSQYGGSGVLS--VTDIAGAARALELGASAGTAALIASNTDAHDRERRAAADQSMDVKVAVALLECLTALARTRDCRRYMAPLAQDVAAVTLPGLSARAPVTLRAATIELFRALMALDGDGLWVILLQ 1221
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Match: D7FND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND3_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 1.540e-18 Identity = 70/167 (41.92%), Postives = 97/167 (58.08%), Query Frame = 1
Query: 22 SPLAASPWFRNLFIEFAQPEDIQRT------VG---KGGMEGLLEALHEHQKSLGLLDVDESDEDG-VEAEEAD----------------------RVEDDRDVGRRDLEEAERPAKEIAESAEVKILSEVLTRCCSLLATPVLMTQAQALACVRECILKLASTGAE 426
S LA SPWFR LF+EFA D+ R VG K GL++A+ EH++++G D+ E+G VE++ A+ + E++ D G+++L E + ++IAES EVK LSEVL R C LATP L TQA ALAC+R+C+LKLAS GA+
Sbjct: 1110 SALAESPWFRQLFVEFADASDVLRVEENSSGVGDKAKAATNGLVKAVKEHREAMGYDVTDDDSEEGRVESDTANTEYERTKAKWREIEEEARKAAGQAEEESD-GQQELPEPDAEGRKIAESEEVKTLSEVLARSCHYLATPSLETQALALACMRDCVLKLASAGAD 1275
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Match: A0A4D9D7J6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7J6_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 5.640e-15 Identity = 100/339 (29.50%), Postives = 140/339 (41.30%), Query Frame = 1
Query: 253 EEAERPAKEIAESAEVKILSEVLTRCCSLLATPVLMTQAQALACVRECILKLASTGAEPALLPHVHRVWRPLMSCLREHLTSPSRGSSFPLRSSEHFTELMVPQHRQLAANTTLGTSPKTWEALPARRAVILHFLDTVDCLAGVCGDFLSTKITEDLWPVMKVLLARHVFTAASSGEGGAE-LEAHRFSGGKVTAADLVV--------VSPSARHPVRGGGTGGGEYRAVQSSLPT-------SRARFVDSQVL-NRA----VTCLDSLCRHEECQLFMTPLARELALLTLPCLSVGAPVTLRQSAKSLFSVLTFLDGDAIWLLLQQTVHEAASLTPNR 1206
EE E ++ ++E ++ E++ RCC LA P L Q Q+LA +RE + +L+S LLP VHRVW +M+ LR +S + P+ R+ G K + L A +++ LD V LAG+CGD+LS K TE+LWPV+K+LL ++ GG + +GG TA+ V V P G + R P R + Q L +RA V CL S E+ + PL E+ L L A LF L LDG A+W LL S P R
Sbjct: 1293 EEGEEMDEDDKPTSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRL--VLLPTVHRVWPAVMARLRACASS-----------------IGGPRSRRP------GQDEKDMD-LSAAYLLVVEALDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASATSSHERRAGGPRAIRVSIMAGGASTASSSHVPALGQQGLVLPKQCPDQTALAETGSDRRGQLGGEPLWDGLNLRQGYRERERQTLQHRAEAALVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGHAPTSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPR 1605
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Match: W7TRQ1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRQ1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.480e-14 Identity = 96/334 (28.74%), Postives = 133/334 (39.82%), Query Frame = 1
Query: 289 SAEVKILSEVLTRCCSLLATPVLMTQAQALACVRECILKLASTGAEPALLPHVHRVWRPLMSCLREHLTSPSRGSSFPLRSSEHFTELMVPQHRQLAANTTLGTSPKTWEALPARRAVILHFLDTVDCLAGVCGDFLSTKITEDLWPVMKVLLARHVFTAASSGEGGAE-LEAHRFSGGKVTAADLVVVSPSARHPV-----------------RGGGTGGGE----------YRAVQSSLPTSRARFVDSQVLNRAVTCLDSLCRHEECQLFMTPLARELALLTLPCLSVGAPVTLRQSAKSLFSVLTFLDGDAIWLLLQQTVHEAASLTPNR 1206
++E ++ E++ RCC LA P L Q Q+LA +RE + +L+S LLP VHRVW +M+ LR +S + P+ R+ G K + L A +++ LD V LAG+CGD+LS K TE+LWPV+K+LL + GG + R +G TA+ V + + V R G GG YR + RA V CL S E+ + PL E+ L L A LF L LDG A+W LL S P R
Sbjct: 528 TSEESLILEIIERCCYFLAYPSLFIQHQSLAVLRETLSRLSSRRL--VLLPTVHRVWPAVMARLRACASS-----------------IGGPRSRRP------GQDEKDMD-LSAAYLLVVEGLDMVAGLAGLCGDYLSFKFTEELWPVLKILLLASAKSFHERRAGGPRAIRVSRMAGDASTASSSHVPALGQKGLVLPKQCPDQTALAETDNDRRGQLGGEPLWDGLNLHQGYRERERQTLQHRAEAA-------LVHCLHSFVASEDAFRYCVPLVHEIGQSCLFLLGCAPNSPSAGDALILFRALASLDGAALWPLLMAAAGWDVSFRPPR 828 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1087.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1087.7.1 >prot_D-mesarthrocarpus_Contig1087.7.1 ID=prot_D-mesarthrocarpus_Contig1087.7.1|Name=mRNA_D-mesarthrocarpus_Contig1087.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=405bp GGAGGSASPLAASPWFRNLFIEFAQPEDIQRTVGKGGMEGLLEALHEHQKback to top mRNA from alignment at D-mesarthrocarpus_Contig1087:9571..15320+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1087.7.1 ID=mRNA_D-mesarthrocarpus_Contig1087.7.1|Name=mRNA_D-mesarthrocarpus_Contig1087.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1087:9571..15320+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1087:9571..15320+ >mRNA_D-mesarthrocarpus_Contig1087.7.1 ID=mRNA_D-mesarthrocarpus_Contig1087.7.1|Name=mRNA_D-mesarthrocarpus_Contig1087.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1215bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1087:9571..15320+ (Discosporangium mesarthrocarpum MT17_79)back to top |