mRNA_D-mesarthrocarpus_Contig10859.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: A0A848WCC4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WCC4_9PROT) HSP 1 Score: 177 bits (449), Expect = 1.950e-52 Identity = 103/209 (49.28%), Postives = 126/209 (60.29%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTR----RGDVAARSGV-------------------------LSHGRSGDLRYLLRAYGRESFELVATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
D QRLYD + LV RVGDR+ ELCVMSLVAL+AGERH+DRP ACPVI +AIK+ND +D EARQ LKPFAPRI+GTRDG A RA +V IL +V+PR ++AA+ V L GR D+RYLLRA R S ELVA + +++ AR ++ DS W+WN A DL+DR CDVG
Sbjct: 4 DISHQRLYDSISLVPRVGDRSVNELCVMSLVALLAGERHTDRPSGACPVIATFAIKVNDGIDCEARQTLKPFAPRIVGTRDGLARGRAWVLVNGILGEVLPRWAQDNGHPLSDELAAQLRVSSQAFDPDELNTLIGLVRREAHNLGLDRGRQNDIRYLLRACARGSDELVANSCASFISDLARHPANQADSGWYWNKAIDLIDRICDVG 212
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: UPI0010801AA1 (hypothetical protein n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801AA1) HSP 1 Score: 142 bits (358), Expect = 7.900e-39 Identity = 82/194 (42.27%), Postives = 114/194 (58.76%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTRRGDVAARSGVLSHGRSGDLRYLLRAY------------GRESFEL-VATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVGI 564
D QR +D ++LV+ +GD ++C+MSLVA +AGE H+D P A P+I ++AI LND L REARQ LKPFAPRIIGT DG RA + ++++++PRL R AR G L +G R+ LR GR +L +A +L A+ A+D R+++WFWN A LLDR C+VG+
Sbjct: 4 DLRLQRAFDNIELVSGIGDPRLGQMCIMSLVACLAGEEHTDSPATASPLIRSFAIPLNDHLPREARQRLKPFAPRIIGTNDGLDARRAEILRTTLVQEILPRLSHHCRRPAGARRGRLGRVWAGLRRHYLRRQIARLHAQAEMGGGRPVLDLQMAGMGGRLLGLCAQEATDPREADWFWNQAIGLLDRMCEVGL 197
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: UPI001C2C0E1B (hypothetical protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2C0E1B) HSP 1 Score: 135 bits (339), Expect = 4.270e-36 Identity = 82/200 (41.00%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTRRGDVAARSGVLSHGRSGDL-RYLLRAYGRESFELVA-------------------TAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
D QR++DRV+LV+ +G ++CVM+ VA +AGE H+D P CA +I A+AI LND + REARQ LKPFAPRI+GT DG RA + + +++PR L+ R+ AA R+G L R LR RE +A +AA ++ AR +DAR++EW+W+ A LLDR CDVG
Sbjct: 4 DLRLQRVFDRVELVSGIGTPDLGQMCVMAFVAALAGEGHTDAPSCASQLIRAFAIPLNDHMPREARQRLKPFAPRILGTNDGLDAARAEVLRQVVAEEILPRTLEHRQ---AAPGAAAPQWRAGPLGRLWLRLCRRELHNRIARLLAQAGHDHRPGHADDLASAAGRLIGLCARSTTDAREAEWYWSRAIGLLDRLCDVG 200
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: A0A8J2UZ85_9PROT (Uncharacterized protein n=2 Tax=Siccirubricoccus deserti TaxID=2013562 RepID=A0A8J2UZ85_9PROT) HSP 1 Score: 130 bits (327), Expect = 2.290e-34 Identity = 79/192 (41.15%), Postives = 115/192 (59.90%), Query Frame = 1
Query: 34 QRLYDRVDLVN-RVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRL--LDTRRGDVAARSGVLSHGRSGDLRYLLRAYGRES----FEL---------VATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
+R +++V+LV+ +G+ ++ +C+MSLVA +AGE HSD P A P+I +A+ +ND + RQ LK FAPRIIGT DG EERAR + + +V+ R DT + V A G L+ LR L R +G+++ FE+ +A+ A ++A AR A DAR+ EW+WN A +LDR CDVG
Sbjct: 8 ERAFEQVELVSGTIGNPGERRMCLMSLVAFLAGEDHSDAPRTASPLIQTFAVSINDHMPHRVRQRLKAFAPRIIGTNDGLDEERARLLRQLLAEEVLARAPGQDTLQPAVPATGGFLN------LRRLWRWFGKDAQHHLFEVALSSGDDRSMASEAARLIARRARNAVDAREQEWYWNAAIGVLDRLCDVG 193
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: A0A8J2UX57_9PROT (Uncharacterized protein n=1 Tax=Siccirubricoccus deserti TaxID=2013562 RepID=A0A8J2UX57_9PROT) HSP 1 Score: 129 bits (325), Expect = 6.680e-34 Identity = 80/193 (41.45%), Postives = 109/193 (56.48%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTRRGDVAARSGVLSHG-----RSGDLRYLLRAY-GRESFE-------LVATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
D QR++DRV LV+ +GD +CVMSLVA +AGE ++DRP CA P+I +AIK+ND + EARQ LKPFAPRI+GT DG ERA + + +++ L RR +G L+ R L+ ++A GR +A+ A +L AR DA ++E +WN A LLDR CDVG
Sbjct: 6 DVRLQRVFDRVKLVSGIGDPDAGTMCVMSLVACLAGEGYTDRPTCASPLIRIFAIKINDHMPAEARQRLKPFAPRILGTNDGRDGERAEVLRRALAEELLAELSGQRRAPAGTSNGSLARHFWTRLRKYQLQRRIKALLGRARMNDGPGAGIALASGAAQLLVVCARDTRDAGEAEQYWNSAIGLLDRLCDVG 198
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: UPI001C6783DB (hypothetical protein n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C6783DB) HSP 1 Score: 123 bits (309), Expect = 1.040e-31 Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 34 QRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPR-----------------LLDT-----RRGDVAARSGVLSHGRSGDLRYLLRAYGRESFELVATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
QR DRV+LV+ +G ++++C+M+LVA +AGE H+D+P A P+I A+AI +ND + RQ LKPFAPRIIGT DG ERA + A + ++PR LLD RRG++ R L LR G+E +A AA +LA AR ASD R+++W+W A LLDR C+VG
Sbjct: 9 QRALDRVELVSGLGVPGREQMCIMALVACLAGEGHTDQPRTASPLIRAFAIPVNDEMPDAMRQRLKPFAPRIIGTNDGRDAERADLLRAGLAGQILPRARRRYGPAPIEARHPLRLLDQVWHRMRRGEIRRRIDRLVEQSERGLRP-----GQEV--QLAAAAGRLLALCARDASDPREADWYWTTAISLLDRMCEVG 199
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: UPI0010C15053 (hypothetical protein n=1 Tax=Roseomonas sp. AR75 TaxID=2562311 RepID=UPI0010C15053) HSP 1 Score: 121 bits (303), Expect = 7.800e-31 Identity = 79/195 (40.51%), Postives = 108/195 (55.38%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRL-----LDTRR-----GDVAARSGVLSHGRSGDL---RYLLRAYGRESFELVATAAVV--MLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
D +R +RV+LV VG R +CVMSLVA +AGE H D P CA P+I A+AI LND + RQ LKPFAPRI+GT+DG RA + + +++P+L +RR V + G+ R + R + A G + VA A V +LA +AR A+D R++E W+ A LLDR CD+G
Sbjct: 4 DLRLERALERVELVTGVGTRDAGRMCVMSLVACLAGEEHGDSPGCASPLIRAFAIPLNDNMPHAVRQRLKPFAPRILGTQDGLDASRAELLRMALAEEILPKLGGRNPPPSRRFAGPLWRVWSLLGMRRLEREAEWMMDRAVALADGADMARAVAAAGAVGRLLARAARDANDPREAERLWDMAIGLLDRMCDIG 198
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: UPI001A9755AE (hypothetical protein n=1 Tax=Sabulicella rubraurantiaca TaxID=2811429 RepID=UPI001A9755AE) HSP 1 Score: 120 bits (301), Expect = 2.240e-30 Identity = 83/190 (43.68%), Postives = 102/190 (53.68%), Query Frame = 1
Query: 46 DRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTRRGDVAA-------------RSGVLSHGRSGDLRYLLRAYGRES--FEL---VATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
+ V+LV VGD + CVMSLVA +AGE H+DRP CA VI A AI +ND + EARQ LK F PRI+GT DG RA + IL +VVP+ L + A R+ + G R L A G +S FEL VA AA ++ A A A D EW+WN A DLLDR CD+G
Sbjct: 11 EAVELVQGVGDPLLGQFCVMSLVACLAGEGHTDRPRCASAVIRALAIPVNDRMPPEARQRLKVFVPRILGTNDGLDGLRAAILCRAILEEVVPKTLFEAGRERAKGRERGFFWRLWTRRAKRVLIGEITAARAKLLAEGEQSTPFELKERVAEAAGHLITLCAADAPTADDEEWYWNKAIDLLDRLCDIG 200
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: A0A317FHA6_9PROT (Uncharacterized protein n=2 Tax=Falsiroseomonas bella TaxID=2184016 RepID=A0A317FHA6_9PROT) HSP 1 Score: 119 bits (299), Expect = 3.490e-30 Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 1
Query: 22 DFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPRLLDTRRGDVAARS-----------GVLSHGRSGDL---RYLLRAYGRESFELVATAAVV--MLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
D +R +RV+LV VG R +CVMSLVA +AGE H D P CA +I A+AI LND + RQ LKPFAPRI+GT+DG RA + + +++PRL R A R G+ R + R + A G + VA A V +LA +AR A+D R+++ W+ A LLDR CD+G
Sbjct: 9 DLRLERALERVELVTGVGTRDAGRMCVMSLVACLAGEEHGDSPSCASALIRAFAIPLNDNMPHAVRQRLKPFAPRILGTQDGQDPARAELLRMALAEEILPRL-GGRNAQPARRFAGPLWRLWSLLGMRRLEREAEWMMDRAVALADGADMARAVAAAGAVGRLLARAARDATDPREADRLWDMAIGLLDRMCDIG 203
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Match: A0A8J2Z8F7_9PROT (Uncharacterized protein n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2Z8F7_9PROT) HSP 1 Score: 115 bits (288), Expect = 1.410e-28 Identity = 75/198 (37.88%), Postives = 107/198 (54.04%), Query Frame = 1
Query: 34 QRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPECACPVITAYAIKLNDALDREARQHLKPFAPRIIGTRDGYAEERARFIVARILRDVVPR-----------------LLDT-----RRGDVAARSGVLSHGRSGDLRYLLRAYGRESFELVATAAVVMLANSARLASDARDSEWFWNYATDLLDRTCDVG 561
QR DRV+LV+ +G + ++C+M+LVA +AGE H+D+P A P+I +AI +ND + RQ LKPFAPRI+GT DG ERA + ++ ++PR L++ RRG++ R L LR G+E AT +LA AR ASD R+++W+W A LLDR C+VG
Sbjct: 9 QRALDRVELVSGLGIPGRGQMCIMALVACLAGEGHTDQPRTASPLIRGFAIPVNDEMPDAMRQRLKPFAPRILGTNDGRDAERAELLREALVTQILPRARLRYGPAPLQARHPLRLVERVWHRMRRGEIRRRIDRLVEQSERGLRP-----GQEVQLAAATGR--LLALCARDASDPREADWYWGTAITLLDRMCEVG 199 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10859.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10859.1.1 >prot_D-mesarthrocarpus_Contig10859.1.1 ID=prot_D-mesarthrocarpus_Contig10859.1.1|Name=mRNA_D-mesarthrocarpus_Contig10859.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=188bp MPVPHFPDFDAQRLYDRVDLVNRVGDRAQQELCVMSLVALMAGERHSDRPback to top mRNA from alignment at D-mesarthrocarpus_Contig10859:388..1038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10859.1.1 ID=mRNA_D-mesarthrocarpus_Contig10859.1.1|Name=mRNA_D-mesarthrocarpus_Contig10859.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=651bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10859:388..1038- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10859:388..1038- >mRNA_D-mesarthrocarpus_Contig10859.1.1 ID=mRNA_D-mesarthrocarpus_Contig10859.1.1|Name=mRNA_D-mesarthrocarpus_Contig10859.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=564bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10859:388..1038- (Discosporangium mesarthrocarpum MT17_79)back to top |