mRNA_D-mesarthrocarpus_Contig10836.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 347 bits (889), Expect = 6.900e-111 Identity = 199/468 (42.52%), Postives = 284/468 (60.68%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVLVRL--------------NRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRYATSFVTVHI-----DDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRHI-KLMN 1347
GR+ + +W + K N+ G + + KARLVA+G+SQ +D F + +P PSS++I+L+ A ANE + + H+D +QA A +D +V +RL RA+YGLKQ+ R+W + L+ GF+ KADPC+FR V D + V G+ +DC L +L+ FPT +LG GC RD E G L ISQTA+I+ + R DV S+S PA+P + P+++ E G +RE IG+++W + +RPDIS +VR++ R + P+E K +++L YL +R+ GI YE+GSGL LA + D+S++ D RR VSG A G + S+TQ V+LS++EAEY+A G+ VKEALFVR +L F+ P+ I V +DN GA+ L +NPLS+ R+KHI+VRYHF+ L +S DISI VST Q AD+LTKAL K S H KLMN
Sbjct: 41 GRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYA-DAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETS-GSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 359 bits (922), Expect = 2.400e-109 Identity = 203/469 (43.28%), Postives = 288/469 (61.41%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVLVRL--------------NRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFR-----YATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRHI-KLMNL 1350
GR+ + +W + K N+ G + KARLVA+G+SQ +D F + +P PSS++I+L+ A ANE + H+D +QA A +D EV ++L RA+YGLKQ+ R+W + L+ GF+ KADPC+FR + +++DD+ V G+ EDC+ L +L+ +FPT NLG GC RD E G L ISQTA+I+ + ER DV S+S PA P A L P++E E G +RE IG+++W + +RPD+S +VR++ R + P++ ++L YL G+R+ GI Y++GSGL LA + D+S++ D RR VSG A G V S+TQ V+LS++EAEY+A G+ VKEALFVR +L F+ P+ I V +DN GAI L +NPLS+ RTKHI+VRYHF+ L +S DIS+ V T Q AD+LTKAL + S H KLMNL
Sbjct: 778 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1244
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 347 bits (889), Expect = 5.510e-109 Identity = 190/461 (41.21%), Postives = 280/461 (60.74%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVL--------------VRLNRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRY-----ATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAA--FADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESF 1323
G I RWV+K K +E G + +AKARLVAKG+ Q+ +D +T++PT ++++IRL+ A A + N ++H D EQA Q+ +D EVL VRLN++LYGLKQASR + R LL +GF+ S +DPC+ R+ + +H+DD+ GT+ + + +AL PT NLG + GC F+RD E G + ISQ ++I + ER ++C +S PA+P E E AG+ RE++G L+W A+ TRP+ SN+VR++ R S +P + K A ++L YL + + Y+Q + +++ + D+ F+ RR VSG V+ V WFS TQ+ V+LSTSEAEY+AMG VKEALFV +L ++P P I V++DN GAI LA+NPLS+ R+KHI+VR+HFL +L + I + HV ++ Q AD+LTKAL + F
Sbjct: 254 GCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAK-PRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 359 bits (922), Expect = 8.080e-108 Identity = 203/469 (43.28%), Postives = 288/469 (61.41%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVLVRL--------------NRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFR-----YATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRHI-KLMNL 1350
GR+ + +W + K N+ G + KARLVA+G+SQ +D F + +P PSS++I+L+ A ANE + H+D +QA A +D EV ++L RA+YGLKQ+ R+W + L+ GF+ KADPC+FR + +++DD+ V G+ EDC+ L +L+ +FPT NLG GC RD E G L ISQTA+I+ + ER DV S+S PA P A L P++E E G +RE IG+++W + +RPD+S +VR++ R + P++ ++L YL G+R+ GI Y++GSGL LA + D+S++ D RR VSG A G V S+TQ V+LS++EAEY+A G+ VKEALFVR +L F+ P+ I V +DN GAI L +NPLS+ RTKHI+VRYHF+ L +S DIS+ V T Q AD+LTKAL + S H KLMNL
Sbjct: 1157 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1623
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 359 bits (922), Expect = 1.570e-107 Identity = 203/469 (43.28%), Postives = 288/469 (61.41%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVLVRL--------------NRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFR-----YATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRHI-KLMNL 1350
GR+ + +W + K N+ G + KARLVA+G+SQ +D F + +P PSS++I+L+ A ANE + H+D +QA A +D EV ++L RA+YGLKQ+ R+W + L+ GF+ KADPC+FR + +++DD+ V G+ EDC+ L +L+ +FPT NLG GC RD E G L ISQTA+I+ + ER DV S+S PA P A L P++E E G +RE IG+++W + +RPD+S +VR++ R + P++ ++L YL G+R+ GI Y++GSGL LA + D+S++ D RR VSG A G V S+TQ V+LS++EAEY+A G+ VKEALFVR +L F+ P+ I V +DN GAI L +NPLS+ RTKHI+VRYHF+ L +S DIS+ V T Q AD+LTKAL + S H KLMNL
Sbjct: 1320 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1786
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 345 bits (886), Expect = 3.710e-106 Identity = 189/460 (41.09%), Postives = 281/460 (61.09%), Query Frame = 1
Query: 16 IGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEV--------------LVRLNRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRY-----ATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAA--FADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRH 1332
I RWV+K K +E G + +AKARLVAKG+ Q+ +D +T++PT ++++ RL+ A A + N ++H+D EQA +Q+++D EV +VRLN++LYGLKQASR + R L +GF+ S +DPC+ R+ V +H+DD+ GT+ + + AL PT NLG + GC F RD E G + +SQ ++I + ER +VC +S PA+P E EGAG+ RE++G+L+W A+ TRPDISN+VR++ R S +P + K A ++L YL + + ++ + ++ + + D+ F+ RR VSG V+ V W S+TQ+ V+ STSEAEY+AMG VKEALFV +L F++P P I V +DN GAI LA+NPLS+ R+KHI+VR+HFL +L + I + HV +E Q AD+LTKAL ++ F H
Sbjct: 493 IDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAK-PRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 951
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 354 bits (908), Expect = 9.400e-106 Identity = 196/456 (42.98%), Postives = 281/456 (61.62%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEVLVRL--------------NRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFR-----YATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEK 1314
GR+ + +W + K N+ G + KARLVA+G+SQ +D F + +P PSS++I+L+ A ANE + H+D +QA A +D EV ++L RA+YGLKQ+ R+W + L+ GF+ KADPC+FR + +++DD+ V G+ EDC+ L +L+ +FPT NLG GC RD E G L ISQTA+I+ + ER DV S+S PA P A L P++E E G +RE IG+++W + +RPD+S +VR++ R + P++ ++L YL G+R+ GI Y++GSGL LA + D+S++ D RR VSG A G V S+TQ V+LS++EAEY+A G+ VKEALFVR +L F+ P+ I V +DN GAI L +NPLS+ RTKHI+VRYHF+ L +S DIS+ V T Q AD+LTKAL +
Sbjct: 1177 GRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 1630
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 346 bits (888), Expect = 2.300e-104 Identity = 190/464 (40.95%), Postives = 282/464 (60.78%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEV--------------LVRLNRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRY-----ATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAA--FADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRH 1332
G I RWV+K K +E G + +AKARLVAKG+ Q+ +D +T++PT ++++ RL+ A A + N ++H+D EQA +Q+++D EV +VRLN++LYGLKQASR + R L +GF+ S +DPC+ R+ V +H+DD+ GT+ + + AL PT NLG + GC F RD E G + +SQ ++I + ER +VC +S PA+P E EGAG+ RE++G+L+W A+ TRPDISN+VR++ R S +P + K A ++L YL + + ++ + ++ + + D+ F+ RR VSG V+ V W S+TQ+ V+ STSEAEY+AMG VKEALFV +L F++P P I V +DN GAI LA+NPLS+ R+KHI+VR+HFL +L + I + HV +E Q AD+LTKAL ++ F H
Sbjct: 756 GCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAK-PRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVH 1218
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 325 bits (832), Expect = 8.110e-104 Identity = 178/430 (41.40%), Postives = 256/430 (59.53%), Query Frame = 1
Query: 106 QQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEV--------------LVRLNRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRYATS-----FVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGS--GLELAAFADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRH 1332
Q+ +DC +TYAPT + S++RLLAA A E N + HFD +QA +Q+D+D +V +V+LN++LYGLKQASR+W+ + L+ LGF AD C+FR + VH+DD+F +G E CD + L+ P NLG L ++GC + RDW+ G L ISQ + +L V P +L + E + RELIG+L+W A TRPDI+N+VR++ R P E + + +L Y+ + + GI + +GS GL + F D+ ++ A RR VSGG V+ G + WFSRTQ+ V LST+EAEY+++ V+KE LF+R + FM P+ G+P I V++DN GAI LA+NP+S +KHI+VR+HF+ +LV K+ISI+HV + Q AD LTKAL F H
Sbjct: 2 QRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP-CIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFH 430
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE) HSP 1 Score: 331 bits (848), Expect = 2.970e-103 Identity = 193/464 (41.59%), Postives = 269/464 (57.97%), Query Frame = 1
Query: 4 GRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPSSSTIRLLAAFANETNRGMVHFDAEQALIQADIDTEV--------------LVRLNRALYGLKQASRRWNDRSTQVLLGLGFDPSKADPCLFRY-----ATSFVTVHIDDMFVVGTREDCDALSKALSFEFPTNNLGPLSLHTGCVFARDWERGQLLISQTAFINQLCERVDVCSSSPTPAAPNARLLPRQEGEGAGNARLRELIGALIWAADMTRPDISNSVRSLTRSSQDPSEEPSKGAIRVLQYLHGSREQGIVYEQGSGLELAA--FADSSFSGDRAGRRYVSGGAVVFGRAAVPWFSRTQRTVALSTSEAEYMAMGKVVKEALFVRNILFFMQPQCGVPEGICVYKDNNGAIDLAKNPLSTVRTKHINVRYHFLGDLVQSKDISIYHVSTERQAADVLTKALEKESFFRH 1332
G I RWV+K K +E G + +AKARLVAKG+ Q+ +D T++PT ++++IRLL A A + N ++H D EQA +Q +D V +VRLN++LYGLKQASR + R L +GF+ S +DPC+ R+ V +H+DD+ G++ + + AL PT NLG + GC F RD E G + ISQ ++I + ER +V +S PA+P E E AG+ RE++G +W A TRPDISN VR++ R S +P K A ++L YL G+ + +++ S +++ + D+ F+ RR VSG V V W SRTQ+ VA STSEAEY+AMG VKEALF +L F++P E I V +DN GAI LA NPLS+ R KHI+VR+HFL L + I I HVS++ Q AD+LTKAL +E F H
Sbjct: 208 GCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAGSKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSRE-IKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVH 670 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10836.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10836.1.1 >prot_D-mesarthrocarpus_Contig10836.1.1 ID=prot_D-mesarthrocarpus_Contig10836.1.1|Name=mRNA_D-mesarthrocarpus_Contig10836.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=451bp TGRKAIGGRWVWKGKYNELGFVTRAKARLVAKGYSQQEELDCFDTYAPTPback to top mRNA from alignment at D-mesarthrocarpus_Contig10836:1181..2588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10836.1.1 ID=mRNA_D-mesarthrocarpus_Contig10836.1.1|Name=mRNA_D-mesarthrocarpus_Contig10836.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1408bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10836:1181..2588+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10836:1181..2588+ >mRNA_D-mesarthrocarpus_Contig10836.1.1 ID=mRNA_D-mesarthrocarpus_Contig10836.1.1|Name=mRNA_D-mesarthrocarpus_Contig10836.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1353bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10836:1181..2588+ (Discosporangium mesarthrocarpum MT17_79)back to top |