mRNA_D-mesarthrocarpus_Contig10835.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10835.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig10835.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10835.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10835contigD-mesarthrocarpus_Contig10835:3462..4066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCZ5
PFAMsRCC1
Model size607
Max annot lvl2759|Eukaryota
KEGG koko:K10614
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.54e-07
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
EC2.3.2.26
Descriptionguanyl-nucleotide exchange factor activity
Cds size603
COG categoryDZ
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789216.984931-CDS-D-mesarthrocarpus_Contig10835:3463..40661680789216.984931-CDS-D-mesarthrocarpus_Contig10835:3463..4066Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10835 3464..4066 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10835.5.1prot_D-mesarthrocarpus_Contig10835.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10835 3464..4066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10835.5.1

>prot_D-mesarthrocarpus_Contig10835.5.1 ID=prot_D-mesarthrocarpus_Contig10835.5.1|Name=mRNA_D-mesarthrocarpus_Contig10835.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=201bp
DILSRAAGERRLMMGGQMSSVSGGWAAVAGLSCAATKEKLASTVSTLVVL
HCRELLLKSLLQCYAQVHWNRFLGAAARTPGAGAGALALTGAAAAAEGRV
LQDAELSRALAGFLGVQEPGRASVATSVETEKGGAGEGAPSEEEGKQDGR
VVDTGTPVTAAPATTATATATATSPPSEAMSTGTAAGLAKERSQRPEAGA
V
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mRNA from alignment at D-mesarthrocarpus_Contig10835:3462..4066-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10835.5.1 ID=mRNA_D-mesarthrocarpus_Contig10835.5.1|Name=mRNA_D-mesarthrocarpus_Contig10835.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=605bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10835:3462..4066- (Discosporangium mesarthrocarpum MT17_79)
GACATACTCTCCCGTGCAGCTGGGGAGAGGAGGCTGATGATGGGGGGGCA
GATGAGCAGTGTGTCAGGGGGTTGGGCGGCAGTAGCCGGTCTGTCCTGTG
CGGCCACCAAGGAGAAGCTGGCCTCCACAGTATCCACGCTTGTGGTCCTG
CACTGCCGGGAGCTGCTCCTCAAGTCACTGCTTCAGTGTTATGCCCAGGT
TCATTGGAATCGTTTCTTGGGTGCTGCAGCCAGGACTCCTGGTGCTGGTG
CTGGTGCCTTGGCTCTGACAGGGGCAGCAGCAGCAGCAGAGGGGAGAGTA
CTGCAGGATGCAGAGCTTTCACGTGCTTTGGCTGGCTTCCTTGGTGTACA
AGAACCTGGCAGGGCATCGGTGGCAACATCAGTGGAAACAGAGAAGGGGG
GAGCTGGAGAGGGAGCCCCTTCAGAAGAGGAGGGAAAGCAGGACGGGCGG
GTGGTTGACACTGGGACCCCTGTCACGGCAGCACCAGCAACAACAGCAAC
AGCAACAGCAACAGCAACGTCACCACCGTCAGAGGCAATGAGCACTGGCA
CTGCTGCTGGCCTTGCTAAGGAGCGCAGCCAGAGGCCTGAGGCAGGAGCA
GTCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10835:3462..4066-

>mRNA_D-mesarthrocarpus_Contig10835.5.1 ID=mRNA_D-mesarthrocarpus_Contig10835.5.1|Name=mRNA_D-mesarthrocarpus_Contig10835.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=603bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10835:3462..4066- (Discosporangium mesarthrocarpum MT17_79)
GACATACTCTCCCGTGCAGCTGGGGAGAGGAGGCTGATGATGGGGGGGCA
GATGAGCAGTGTGTCAGGGGGTTGGGCGGCAGTAGCCGGTCTGTCCTGTG
CGGCCACCAAGGAGAAGCTGGCCTCCACAGTATCCACGCTTGTGGTCCTG
CACTGCCGGGAGCTGCTCCTCAAGTCACTGCTTCAGTGTTATGCCCAGGT
TCATTGGAATCGTTTCTTGGGTGCTGCAGCCAGGACTCCTGGTGCTGGTG
CTGGTGCCTTGGCTCTGACAGGGGCAGCAGCAGCAGCAGAGGGGAGAGTA
CTGCAGGATGCAGAGCTTTCACGTGCTTTGGCTGGCTTCCTTGGTGTACA
AGAACCTGGCAGGGCATCGGTGGCAACATCAGTGGAAACAGAGAAGGGGG
GAGCTGGAGAGGGAGCCCCTTCAGAAGAGGAGGGAAAGCAGGACGGGCGG
GTGGTTGACACTGGGACCCCTGTCACGGCAGCACCAGCAACAACAGCAAC
AGCAACAGCAACAGCAACGTCACCACCGTCAGAGGCAATGAGCACTGGCA
CTGCTGCTGGCCTTGCTAAGGAGCGCAGCCAGAGGCCTGAGGCAGGAGCA
GTC
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