mRNA_D-mesarthrocarpus_Contig10831.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10831.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10831.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: D8LFA5_ECTSI (Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFA5_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-9
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            WSP TWR+ EA+QMPKYD    V   E+I+AKQAPLVFAGE
Sbjct:   71 WSPATWRNREARQMPKYDDPALVTEVEDILAKQAPLVFAGE 111
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A7S2B8S4_9STRA (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B8S4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.790e-8
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGEV 138
            WSP++WRS  A Q+PKY  L  +EAAE  +A+ APLVFAGEV
Sbjct:   68 WSPSSWRSKPAAQLPKYPDLAALEAAEQDLAQSAPLVFAGEV 109
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A1Z8L0K0_9PROT (Phospho-2-dehydro-3-deoxyheptonate aldolase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z8L0K0_9PROT)

HSP 1 Score: 55.5 bits (132), Expect = 1.060e-7
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:    7 KPWSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            K WSP++WR+ EAKQMP Y     +EA E  +AKQ PLVFAGE
Sbjct:    4 KTWSPSSWRTHEAKQMPSYPDAAALEAVEGKLAKQPPLVFAGE 46
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A0C5VMK3_9GAMM (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gynuella sunshinyii YC6258 TaxID=1445510 RepID=A0A0C5VMK3_9GAMM)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-7
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            WSP++WR+  AKQ+P Y   E ++ AE  +AKQ PLVFAGE
Sbjct:    4 WSPSSWRAKPAKQLPTYPDAEQLQQAEQTLAKQPPLVFAGE 44
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: F0XZN4_AURAN (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZN4_AURAN)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-7
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:   10 PWSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGEV 138
            PWSP++WR+ EAKQ+P Y     + AAE  +A  APLVFAGEV
Sbjct:   38 PWSPSSWRNFEAKQIPTYPDAAKLAAAEKELAGCAPLVFAGEV 80
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A355TC20_9PROT (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A355TC20_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 1.300e-6
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:   10 PWSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            PW+P +WR+  A Q P Y  L+ ++AAE  +AKQ PLVFAGE
Sbjct:    7 PWTPDSWRTKRALQQPNYPDLDKLKAAEERLAKQPPLVFAGE 48
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A835Z444_9STRA (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z444_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            W P +WRS +A QMP+Y+  E +  AE I+A+Q+PLVFAGE
Sbjct:   47 WRPDSWRSRKAYQMPEYNDGEKLADAERILARQSPLVFAGE 87
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: UPI0018E9A890 (3-deoxy-7-phosphoheptulonate synthase class II n=2 Tax=Acuticoccus mangrovi TaxID=2796142 RepID=UPI0018E9A890)

HSP 1 Score: 49.3 bits (116), Expect = 1.600e-5
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            WSP++WRS  AKQMP Y   + V A E  +A   PLVFAGE
Sbjct:    3 WSPSSWRSKPAKQMPDYPDKDAVRAVEERLASYPPLVFAGE 43
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A8J7CQW5_9PROT (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Phaeovibrio sulfidiphilus TaxID=1220600 RepID=A0A8J7CQW5_9PROT)

HSP 1 Score: 49.3 bits (116), Expect = 1.600e-5
Identity = 20/41 (48.78%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGE 135
            W+P +WRS  A+QMP+Y   E +++ E +++K  PLVFAGE
Sbjct:    5 WTPESWRSKPARQMPEYPDPEHIKSVEQMLSKYPPLVFAGE 45
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BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Match: A0A6T8ICM8_9STRA (Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8ICM8_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.600e-5
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1 
Query:   13 WSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGEV 138
            WSP++WR+  AKQ+P Y   E ++A E  ++K APLVFAGEV
Sbjct:   37 WSPSSWRTKVAKQIPVYPDEEALKATEVKLSKSAPLVFAGEV 78
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10831.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LFA5_ECTSI2.490e-968.29Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Ta... [more]
A0A7S2B8S4_9STRA7.790e-861.90Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
A0A1Z8L0K0_9PROT1.060e-760.47Phospho-2-dehydro-3-deoxyheptonate aldolase n=3 Ta... [more]
A0A0C5VMK3_9GAMM5.100e-756.10Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
F0XZN4_AURAN5.100e-758.14Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
A0A355TC20_9PROT1.300e-654.76Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
A0A835Z444_9STRA3.340e-656.10Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
UPI0018E9A8901.600e-556.103-deoxy-7-phosphoheptulonate synthase class II n=2... [more]
A0A8J7CQW5_9PROT1.600e-548.78Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]
A0A6T8ICM8_9STRA1.600e-554.76Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10831contigD-mesarthrocarpus_Contig10831:11..148 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFA5
Preferred nameDHS2
PFAMsDAHP_synth_2
Model size138
Max annot lvl2759|Eukaryota
KEGG rclassRC00435
KEGG koko:K01626
KEGG ReactionR01826
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024
KEGG ModuleM00022
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0003849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009534,GO:0009536,GO:0009579,GO:0009611,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0031976,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0050896,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue4.09e-10
EggNOG OGsCOG3200@1|root,2QPP7@2759|Eukaryota
EC2.5.1.54
Description3-deoxy-7-phosphoheptulonate synthase activity
Cds size138
COG categoryE
BiGG ReactioniRC1080.CRv4_Au5_s17_g7580_t1
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789216.6150522-CDS-D-mesarthrocarpus_Contig10831:10..1481680789216.6150522-CDS-D-mesarthrocarpus_Contig10831:10..148Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10831 11..148 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10831.1.1prot_D-mesarthrocarpus_Contig10831.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10831 11..148 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10831.1.1

>prot_D-mesarthrocarpus_Contig10831.1.1 ID=prot_D-mesarthrocarpus_Contig10831.1.1|Name=mRNA_D-mesarthrocarpus_Contig10831.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=46bp
MPKPWSPTTWRSLEAKQMPKYDSLEDVEAAENIIAKQAPLVFAGEV
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mRNA from alignment at D-mesarthrocarpus_Contig10831:11..148-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10831.1.1 ID=mRNA_D-mesarthrocarpus_Contig10831.1.1|Name=mRNA_D-mesarthrocarpus_Contig10831.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10831:11..148- (Discosporangium mesarthrocarpum MT17_79)
ATGCCTAAGCCGTGGTCCCCCACCACATGGAGGTCGCTGGAGGCCAAGCA
GATGCCTAAGTATGACAGCCTGGAGGATGTGGAGGCCGCCGAGAACATCA
TTGCCAAGCAGGCTCCGCTAGTCTTTGCTGGAGAGGTA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10831:11..148-

>mRNA_D-mesarthrocarpus_Contig10831.1.1 ID=mRNA_D-mesarthrocarpus_Contig10831.1.1|Name=mRNA_D-mesarthrocarpus_Contig10831.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10831:11..148- (Discosporangium mesarthrocarpum MT17_79)
ATGCCTAAGCCGTGGTCCCCCACCACATGGAGGTCGCTGGAGGCCAAGCA
GATGCCTAAGTATGACAGCCTGGAGGATGTGGAGGCCGCCGAGAACATCA
TTGCCAAGCAGGCTCCGCTAGTCTTTGCTGGAGAGGTA
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