mRNA_D-mesarthrocarpus_Contig1083.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1083.8.1
Unique NamemRNA_D-mesarthrocarpus_Contig1083.8.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A2E3NJI7_9DELT (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E3NJI7_9DELT)

HSP 1 Score: 523 bits (1347), Expect = 1.640e-185
Identity = 247/272 (90.81%), Postives = 265/272 (97.43%), Query Frame = 1
Query:   34 GVRLATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLWATPEDLARIEAEEAEA 849
            G R+ATIYSHSRLSSFENCPKQFEYRYI K+P+ SEG+EAFVGKRVHEVLERLYLFVG+ QIPGIEKVVDRYHKLWEETYDPERVRIVRENTPL+YYRQLGEDCLRGYYLRHYPFDESETLG+EKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQ+GLSR YG DTE+RLVWHYVAKNRTCVSTRTKEDL +LR+DTIARIDEIQAAT+FPA+KISLCGWCEYK+RCPLWA+PE++AR+EAEEAEA
Sbjct:   50 GPRMATIYSHSRLSSFENCPKQFEYRYIQKIPAASEGIEAFVGKRVHEVLERLYLFVGRDQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLSYYRQLGEDCLRGYYLRHYPFDESETLGLEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQIGLSRQYGHDTEYRLVWHYVAKNRTCVSTRTKEDLRKLRSDTIARIDEIQAATDFPAKKISLCGWCEYKSRCPLWASPEEVARVEAEEAEA 321          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A2E5YPB7_9DELT (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YPB7_9DELT)

HSP 1 Score: 469 bits (1206), Expect = 2.320e-164
Identity = 220/269 (81.78%), Postives = 244/269 (90.71%), Query Frame = 1
Query:   34 GVRLATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLWATPEDLARIEAEE 840
            GVRL TIYSHSRLSSFENCPKQFE+RYI K+PS SEG+EAFVGKRVHE+LERLY+FVG+GQIPG+EKV+DRY KLWEE+YD ERVRIVRE TPL+YYR+LGE+CLRGYYLRHYPFD++ETLG+E+RV+FPLD AG+YRMQGIIDRISRARDGAIE+HDYKTGARVP QRILDQDRQLALYQ+GLSR YGEDT FRLVWHYVAKNR C STR  E+L  LR  TI RIDEI+AAT F ARKI+LC WCEYK RCPL ATPE LAR+EAEE
Sbjct:   30 GVRLGTIYSHSRLSSFENCPKQFEFRYIQKIPSTSEGIEAFVGKRVHEILERLYVFVGRGQIPGVEKVIDRYQKLWEESYDAERVRIVREGTPLSYYRELGENCLRGYYLRHYPFDDAETLGLERRVLFPLDSAGKYRMQGIIDRISRARDGAIEVHDYKTGARVPPQRILDQDRQLALYQIGLSREYGEDTPFRLVWHYVAKNRICSSTREPEELVSLRETTIQRIDEIEAATTFEARKIALCNWCEYKERCPLHATPETLARLEAEE 298          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A7V1IM28_9DELT (PD-(D/E)XK nuclease family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V1IM28_9DELT)

HSP 1 Score: 432 bits (1112), Expect = 1.130e-149
Identity = 208/271 (76.75%), Postives = 232/271 (85.61%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLWATP----EDLARIEAEEA 843
            L T+YSHSRLSSFENCPKQFE+RYILKVP E+E VEAFVGKRVHE+LERLYLFVG+GQIPG+EKVVDRYHKLWEET+DPERVRIVRE TPLA+YR+LGE CLRGYY RHYPFDE ETLGIEKRVVFPLD+AGEYRMQGIIDRISRARDG IE+HDYKTGARVPSQ+ LD+DRQLALYQ+GL+R YG+D  +RLVWH+VA+N+   STRT E+L  LR  TI RIDEI+  T FP RKI+LC WCEYK  CPL+A      E  A   AEEA
Sbjct:   55 LGTLYSHSRLSSFENCPKQFEFRYILKVPRETESVEAFVGKRVHEILERLYLFVGRGQIPGVEKVVDRYHKLWEETWDPERVRIVREGTPLAFYRELGERCLRGYYARHYPFDEDETLGIEKRVVFPLDEAGEYRMQGIIDRISRARDGTIEVHDYKTGARVPSQQRLDEDRQLALYQIGLAREYGDDVPYRLVWHFVARNQIRTSTRTPEELAVLREKTIERIDEIRRTTVFPPRKIALCNWCEYKPLCPLYAEAHPGSEAAAETPAEEA 325          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A7C7UEP1_9DELT (PD-(D/E)XK nuclease family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7UEP1_9DELT)

HSP 1 Score: 426 bits (1096), Expect = 9.860e-148
Identity = 196/260 (75.38%), Postives = 226/260 (86.92%), Query Frame = 1
Query:   34 GVRLATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLWATPE 813
            G  ++ +YSHSRLSSFENC KQFE+RY+LK+PS+ E +EAFVGKRVHE+LERLYLF+G+GQIP IEKVV RY KLWEETYD ERVRIVRE TPL++YRQLGE CLR YY RHYPFDE ETLG+E+RVVFPLD+AG+Y MQGIIDRISRARDG IE+HDYKTGARVPSQ+ILDQDRQLALYQ+GL+R YGED  +RLVWHYVAKN+T +STRT E+L  LR  TI RIDEIQAA ++P  K +LCGWCEYK RCPL++  E
Sbjct:   15 GWHMSPLYSHSRLSSFENCRKQFEFRYVLKIPSDRESIEAFVGKRVHEILERLYLFIGRGQIPSIEKVVVRYQKLWEETYDGERVRIVREGTPLSFYRQLGEQCLRSYYARHYPFDEDETLGVERRVVFPLDEAGKYEMQGIIDRISRARDGTIEVHDYKTGARVPSQKILDQDRQLALYQIGLAREYGEDVRYRLVWHYVAKNQTRISTRTPEELAALRQSTIERIDEIQAADDYPPHKTALCGWCEYKARCPLFSNSE 274          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A7C7YGP1_9DELT (PD-(D/E)XK nuclease family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YGP1_9DELT)

HSP 1 Score: 341 bits (875), Expect = 1.050e-114
Identity = 159/253 (62.85%), Postives = 199/253 (78.66%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLW 801
            ++ IYSHSRLS+FENC K+FE+RY+LK+P +SEG+EAFVGKRVHEVLERLY FVG+GQ P +E+V+DRY+  ++  YD ER+RIV+     A+YR LG  CL  +Y RHYPFD  ETLG+E+RV F LD AGEY MQGI+DRI RARDGAIEI DYKTG+ +P+Q  LD+DRQLALYQ+G++  YG     RLVWHY+AK+RTC STR+ E+L  L+AD IA ID+I+A  EFPA K +LC WC YK+ CP +
Sbjct:    1 MSEIYSHSRLSTFENCRKKFEFRYVLKLPEDSEGIEAFVGKRVHEVLERLYEFVGRGQTPKLERVIDRYNANFDAHYDAERIRIVKAGLDKAFYRALGVRCLNNFYRRHYPFDGDETLGLEQRVRFDLDPAGEYAMQGIVDRIVRARDGAIEIQDYKTGSWIPNQNKLDEDRQLALYQIGVAEEYGSGEPIRLVWHYLAKDRTCSSTRSAEELETLKADVIALIDKIRATREFPATKNALCDWCGYKSFCPAF 253          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A7C8DKK4_9DELT (PD-(D/E)XK nuclease family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8DKK4_9DELT)

HSP 1 Score: 329 bits (843), Expect = 3.660e-110
Identity = 145/248 (58.47%), Postives = 191/248 (77.02%), Query Frame = 1
Query:   49 TIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRC 792
            T+YSHSR++SFE CPKQF YRY+LK+P+E EG+EAF+GKRVHEVLERLY F  +GQIP +E+V+ RYH  W+E YD +RV IV+  TP ++YR LG  C+  YY R +PFD++ETLG+E+ V F LDD G+Y M+G+IDR+ R +DGAIE+HDYKTG  +P+Q+ L+QDRQLALYQ+GL   YG+D  +RLVWHY+ +     S RT E L  LR DT+A ID+I+ A ++P ++  LC WCEYK+RC
Sbjct:    2 TVYSHSRIASFEKCPKQFHYRYVLKIPAEREGIEAFMGKRVHEVLERLYEFAVRGQIPSLEQVIFRYHAFWDEHYDDKRVSIVKSGTPPSFYRDLGVRCIEYYYRRFHPFDQTETLGVEEEVQFTLDDEGKYAMRGVIDRVVRGQDGAIEVHDYKTGRYIPAQKELNQDRQLALYQIGLRDRYGDDQPYRLVWHYLQRKEQRTSNRTPEQLVALRKDTMAVIDQIETAEDYPVQRNRLCDWCEYKDRC 249          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A2D7I2Y6_9DELT (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I2Y6_9DELT)

HSP 1 Score: 329 bits (844), Expect = 4.330e-110
Identity = 150/253 (59.29%), Postives = 195/253 (77.08%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLW 801
            ++T+YSHSRLSSFE C ++F++RY+L++P +SEGVEAFVGKRVHE+LERLY FVG+ Q+P + +V++RY   +++ YD ER+RIVR      YY +LG DCL  +Y R+YPFD+ ETLG+E  V+F LD AGEYR+QG IDR+ R +DG IEI DYKTG  VPS++ LD +RQLALYQLGL+  YG +   RLVWHY+A+ +T  S+RT E L  LR DTIA IDEI+A T+FPA+K +LC WCEYK  CP +
Sbjct:    8 MSTVYSHSRLSSFEQCKQKFQFRYLLEIPEDSEGVEAFVGKRVHEILERLYQFVGRDQVPSLRRVLERYDAEFDQHYDAERIRIVRTEFKRDYYHKLGADCLSRFYRRYYPFDQEETLGLEHHVLFDLDHAGEYRVQGFIDRVCRTKDGTIEIQDYKTGKWVPSRKQLDMERQLALYQLGLAGEYGTEQPMRLVWHYLARGQTRTSSRTPEQLDTLRRDTIALIDEIEATTDFPAQKSNLCNWCEYKKICPAF 260          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A7C8CJ77_9DELT (PD-(D/E)XK nuclease family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8CJ77_9DELT)

HSP 1 Score: 330 bits (845), Expect = 8.210e-110
Identity = 154/253 (60.87%), Postives = 193/253 (76.28%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLW 801
            +  IYSHSRLS+FENC K+FE+RY+L +P +SEGVEAFVGKRVHEVLERLY FVG+ Q+P +E+V+ RY+  ++  YDPER+RIV+      +YR LG  CL  +Y RHYPFD  ETLG+E+RV F LD++GEY MQGI+DRI RARDGAIEI DYKTG+ +P+Q  LDQDRQLALYQ+G++  YG     RLVWHY+AK++ C STR  E+L  L+ D I  IDEI+A  EFPA+K +LC WC YK  CP +
Sbjct:    1 MTEIYSHSRLSTFENCRKKFEFRYVLGLPEDSEGVEAFVGKRVHEVLERLYEFVGRQQLPKLEQVISRYNANFDAQYDPERIRIVKSGLDKDFYRALGVRCLSNFYRRHYPFDADETLGLEQRVSFNLDESGEYVMQGIVDRIVRARDGAIEIQDYKTGSWIPTQSKLDQDRQLALYQIGVAAEYGAGEPIRLVWHYLAKDKICSSTRNPEELEVLKQDVIGLIDEIRATREFPAKKNALCNWCGYKGYCPAF 253          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A424K2C6_9PROT (PD-(D/E)XK nuclease family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A424K2C6_9PROT)

HSP 1 Score: 316 bits (810), Expect = 8.490e-105
Identity = 145/253 (57.31%), Postives = 191/253 (75.49%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLW 801
            ++T+YSHSRLSSFE C ++F++RY+L++P ESEGVEAFVGKRVHE+LERLY FVG+ Q+P + +V++RY   ++E YD +R+RIVR     A+Y  LG DCL  +Y R+YPFD+ ETLG+E+ V F LD  G Y++QG IDR+ RA DG IEI DYKTG  VPS++ LD +RQLALYQLGL   +G D   RLVWHY+A+ +T  STRT   L +L+ +T+A ID+I+A  EFPA+K +LC WCEYK  CP +
Sbjct:    1 MSTVYSHSRLSSFEQCKQKFQFRYLLEIPEESEGVEAFVGKRVHEILERLYQFVGRDQVPSLRRVLERYEAEFDEHYDADRIRIVRSEFDRAHYLALGADCLSRFYRRYYPFDQDETLGLERHVRFNLDQEGRYQVQGYIDRVCRAPDGIIEIQDYKTGKWVPSRKQLDSERQLALYQLGLRGEFGPDEPMRLVWHYLARGQTRTSTRTAAQLDQLQQETMALIDQIEATEEFPAQKSNLCNWCEYKGICPAF 253          
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Match: A0A1Z9BKU1_9BACT (PDDEXK_1 domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1Z9BKU1_9BACT)

HSP 1 Score: 310 bits (795), Expect = 2.320e-102
Identity = 143/266 (53.76%), Postives = 195/266 (73.31%), Query Frame = 1
Query:   43 LATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVEAFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVRENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRMQGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYGEDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPARKISLCGWCEYKNRCPLWATPEDLARIEAEE 840
            +A +YSHSRL+S+ENCPK+FE RY L +P E+EG+E FVGKRVHE+LERLY FV K Q+P + +V++R+  +++E YD  RV+IV++   + YYR LG  CL+ YY  HYPFD+ ETLG+E  + F LD  G Y +QG +DRI RA+DGAIEI DYKTG  +P+Q+ +D DRQLALYQ+G+ R +G D   RLVW Y++K  T VSTR+ E L +L+ +T+A I+ I+AA +FPA+K +LC WC YK  CP +   E+ A  +A+E
Sbjct:   12 MAKLYSHSRLNSWENCPKKFELRYRLGIPEETEGIEGFVGKRVHEILERLYEFVAKDQVPSLRRVIERFDAIFDENYDANRVKIVKDGYDIEYYRALGHRCLQNYYRSHYPFDQDETLGLETHIQFNLDPEGRYGIQGFVDRIVRAQDGAIEIQDYKTGEYIPNQKRIDADRQLALYQIGIGRRFG-DAPVRLVWQYLSKGITRVSTRSAEALEQLQENTLALIERIEAADQFPAKKTNLCRWCTYKPLCPAFGASEEAALEKAQE 276          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1083.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3NJI7_9DELT1.640e-18590.81PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A2E5YPB7_9DELT2.320e-16481.78PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A7V1IM28_9DELT1.130e-14976.75PD-(D/E)XK nuclease family protein n=1 Tax=Deltapr... [more]
A0A7C7UEP1_9DELT9.860e-14875.38PD-(D/E)XK nuclease family protein n=1 Tax=Myxococ... [more]
A0A7C7YGP1_9DELT1.050e-11462.85PD-(D/E)XK nuclease family protein n=1 Tax=Myxococ... [more]
A0A7C8DKK4_9DELT3.660e-11058.47PD-(D/E)XK nuclease family protein n=1 Tax=Myxococ... [more]
A0A2D7I2Y6_9DELT4.330e-11059.29PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A7C8CJ77_9DELT8.210e-11060.87PD-(D/E)XK nuclease family protein n=1 Tax=Myxococ... [more]
A0A424K2C6_9PROT8.490e-10557.31PD-(D/E)XK nuclease family protein n=2 Tax=Bacteri... [more]
A0A1Z9BKU1_9BACT2.320e-10253.76PDDEXK_1 domain-containing protein n=2 Tax=Bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1083contigD-mesarthrocarpus_Contig1083:19196..20140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog671143.DAMO_0884
PFAMsPDDEXK_1
Model size945
Max annot lvl2|Bacteria
KEGG koko:K03657,ko:K07465
KEGG Pathwayko03420,ko03430,map03420,map03430
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.51e-71
EggNOG OGsCOG2887@1|root,COG2887@2|Bacteria,2NQTZ@2323|unclassified Bacteria
EC3.6.4.12
DescriptionPD-(D/E)XK nuclease superfamily
Cds size945
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789216.50817-CDS-D-mesarthrocarpus_Contig1083:19195..201401680789216.50817-CDS-D-mesarthrocarpus_Contig1083:19195..20140Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1083 19196..20140 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1083.8.1prot_D-mesarthrocarpus_Contig1083.8.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1083 19196..20140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1083.8.1

>prot_D-mesarthrocarpus_Contig1083.8.1 ID=prot_D-mesarthrocarpus_Contig1083.8.1|Name=mRNA_D-mesarthrocarpus_Contig1083.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=315bp
PRSSRRASHGRGVRLATIYSHSRLSSFENCPKQFEYRYILKVPSESEGVE
AFVGKRVHEVLERLYLFVGKGQIPGIEKVVDRYHKLWEETYDPERVRIVR
ENTPLAYYRQLGEDCLRGYYLRHYPFDESETLGIEKRVVFPLDDAGEYRM
QGIIDRISRARDGAIEIHDYKTGARVPSQRILDQDRQLALYQLGLSRTYG
EDTEFRLVWHYVAKNRTCVSTRTKEDLTRLRADTIARIDEIQAATEFPAR
KISLCGWCEYKNRCPLWATPEDLARIEAEEAEARAAKTTSGSAASESTQE
NEAEPADDDQLSLL*
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mRNA from alignment at D-mesarthrocarpus_Contig1083:19196..20140+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1083.8.1 ID=mRNA_D-mesarthrocarpus_Contig1083.8.1|Name=mRNA_D-mesarthrocarpus_Contig1083.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=945bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1083:19196..20140+ (Discosporangium mesarthrocarpum MT17_79)
CCGCGCTCGAGTCGTCGCGCGAGTCACGGACGGGGGGTCCGCTTGGCCAC CATCTACAGCCACTCGCGTCTGTCGAGCTTCGAGAACTGTCCCAAGCAGT TCGAGTACCGGTACATCCTGAAGGTCCCGAGCGAGTCCGAGGGCGTCGAA GCCTTCGTCGGCAAGCGCGTCCACGAAGTCCTCGAACGTCTCTACCTCTT CGTCGGCAAGGGCCAGATCCCGGGAATCGAAAAGGTCGTCGACCGCTACC ACAAGCTCTGGGAGGAGACCTACGACCCCGAGCGGGTCCGGATCGTCCGC GAGAACACCCCGCTCGCCTACTACCGCCAGCTCGGCGAGGATTGCCTGCG CGGGTACTACCTCCGCCACTACCCCTTCGACGAGAGCGAGACCCTCGGCA TCGAGAAGCGCGTCGTCTTCCCCCTCGACGACGCGGGCGAGTACCGGATG CAGGGCATCATCGACCGGATCTCGCGGGCGCGAGACGGTGCGATCGAGAT CCACGACTACAAGACCGGCGCCCGGGTTCCGTCGCAGCGCATCCTCGACC AGGACCGCCAGCTCGCTCTCTATCAACTGGGCCTGTCGCGCACCTACGGC GAAGACACCGAGTTCCGCCTGGTCTGGCACTACGTCGCCAAGAACCGCAC CTGCGTCTCGACTCGGACGAAGGAAGACCTGACCCGGCTCCGCGCCGACA CGATCGCCCGGATCGACGAGATCCAGGCGGCGACCGAATTCCCGGCACGC AAGATCTCGCTCTGCGGCTGGTGCGAATACAAGAATCGCTGCCCGCTCTG GGCGACACCCGAGGATCTCGCCCGGATCGAGGCAGAAGAAGCCGAAGCCC GCGCAGCGAAGACGACGTCGGGGAGTGCGGCTTCCGAGTCGACCCAAGAG AACGAAGCCGAGCCGGCGGACGACGACCAGCTCAGCCTCCTCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1083:19196..20140+

>mRNA_D-mesarthrocarpus_Contig1083.8.1 ID=mRNA_D-mesarthrocarpus_Contig1083.8.1|Name=mRNA_D-mesarthrocarpus_Contig1083.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=945bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1083:19196..20140+ (Discosporangium mesarthrocarpum MT17_79)
CCGCGCTCGAGTCGTCGCGCGAGTCACGGACGGGGGGTCCGCTTGGCCAC
CATCTACAGCCACTCGCGTCTGTCGAGCTTCGAGAACTGTCCCAAGCAGT
TCGAGTACCGGTACATCCTGAAGGTCCCGAGCGAGTCCGAGGGCGTCGAA
GCCTTCGTCGGCAAGCGCGTCCACGAAGTCCTCGAACGTCTCTACCTCTT
CGTCGGCAAGGGCCAGATCCCGGGAATCGAAAAGGTCGTCGACCGCTACC
ACAAGCTCTGGGAGGAGACCTACGACCCCGAGCGGGTCCGGATCGTCCGC
GAGAACACCCCGCTCGCCTACTACCGCCAGCTCGGCGAGGATTGCCTGCG
CGGGTACTACCTCCGCCACTACCCCTTCGACGAGAGCGAGACCCTCGGCA
TCGAGAAGCGCGTCGTCTTCCCCCTCGACGACGCGGGCGAGTACCGGATG
CAGGGCATCATCGACCGGATCTCGCGGGCGCGAGACGGTGCGATCGAGAT
CCACGACTACAAGACCGGCGCCCGGGTTCCGTCGCAGCGCATCCTCGACC
AGGACCGCCAGCTCGCTCTCTATCAACTGGGCCTGTCGCGCACCTACGGC
GAAGACACCGAGTTCCGCCTGGTCTGGCACTACGTCGCCAAGAACCGCAC
CTGCGTCTCGACTCGGACGAAGGAAGACCTGACCCGGCTCCGCGCCGACA
CGATCGCCCGGATCGACGAGATCCAGGCGGCGACCGAATTCCCGGCACGC
AAGATCTCGCTCTGCGGCTGGTGCGAATACAAGAATCGCTGCCCGCTCTG
GGCGACACCCGAGGATCTCGCCCGGATCGAGGCAGAAGAAGCCGAAGCCC
GCGCAGCGAAGACGACGTCGGGGAGTGCGGCTTCCGAGTCGACCCAAGAG
AACGAAGCCGAGCCGGCGGACGACGACCAGCTCAGCCTCCTCTGA
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