mRNA_D-mesarthrocarpus_Contig10824.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A6H5JYW5_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW5_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.280e-25 Identity = 48/66 (72.73%), Postives = 60/66 (90.91%), Query Frame = 1
Query: 1 NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPG 198
++R+T+RPRA+VLVPTRELA QVLEVAKR+SR K SSC VVGGEDYGKQ+++LAGTVD++V +PG
Sbjct: 15 SIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPG 80
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI) HSP 1 Score: 101 bits (252), Expect = 1.080e-23 Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 1 NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
++R+T+RPRA+VLVPTRELA QVLEVAKR+SR K SSC VVGGEDYGKQ+++LAGTVD++V +PG +
Sbjct: 93 SIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRL 160
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.020e-23 Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 1 NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
++R+T+RPRA+VLVPTRELA QVLEVAKR+SR K SSC VVGGEDYGKQ+++LAGTVD++V +PG +
Sbjct: 210 SIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRL 277
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A7S2V6I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6I9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.140e-22 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 1
Query: 1 NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
+VR +RPRA+VLVPTRELA+QVL V K++ R AK+S C+VVGGEDYGKQ R LAGTVDL+VA+PG +
Sbjct: 192 SVRAPKRPRAVVLVPTRELAAQVLAVTKQIGRYAKVSCCSVVGGEDYGKQARALAGTVDLVVATPGRL 259
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 6.490e-20 Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1
Query: 7 RRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
R +RPRALVLVPTRELA QVL VAKR+S AK SSCAVVGG D+G+Q+R LAG VD++VASPG +
Sbjct: 152 RAPKRPRALVLVPTRELAVQVLSVAKRLSHNAKFSSCAVVGGGDHGQQRRALAGVVDVVVASPGRL 217
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.170e-19 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 4 VRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
VR+ RPRALVLVPTRELA+QVL V K+V+ AK+SSC + GGEDYGKQKR+LA D++V SPG +
Sbjct: 92 VRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRL 158
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.990e-19 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 7 RRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
R+T RPRAL+LVPTREL +QVLEV K +S V KLSSC + GGED+G Q+R+L G VDL+VASPG +
Sbjct: 202 RQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPGRL 267
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC) HSP 1 Score: 81.3 bits (199), Expect = 2.270e-16 Identity = 38/68 (55.88%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
++RR +RPRAL+L PTREL+ QVLEV + S++AKLSSC+V+GG+ + KQKR L+ +D++V +PG V
Sbjct: 916 SLRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPGRV 983
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A7S4LLS1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS1_9EUGL) HSP 1 Score: 77.8 bits (190), Expect = 3.670e-15 Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 16 QRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
+RPRA+V VPTREL QVL V K +S AK+SS VVGGEDYGKQ+R L VD++VA+PG +
Sbjct: 138 KRPRAIVFVPTRELGQQVLSVLKALSHHAKISSTLVVGGEDYGKQRRALDRPVDVVVATPGRL 200
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Match: A0A7S1I2D0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2D0_9EUGL) HSP 1 Score: 77.8 bits (190), Expect = 3.700e-15 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 7 RRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQKRQLAGTVDLIVASPGEV 204
R+ QRPRA++ VPTRELA QV+ V K +S AKLSS VVGG G Q+R LAG VD++VA+PG +
Sbjct: 202 RKPQRPRAIIFVPTRELAEQVIGVTKSLSHYAKLSSTMVVGGGSAGNQRRALAGPVDIVVATPGRL 267 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10824.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10824.3.1 >prot_D-mesarthrocarpus_Contig10824.3.1 ID=prot_D-mesarthrocarpus_Contig10824.3.1|Name=mRNA_D-mesarthrocarpus_Contig10824.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=68bp NVRRTQRPRALVLVPTRELASQVLEVAKRVSRVAKLSSCAVVGGEDYGKQback to top mRNA from alignment at D-mesarthrocarpus_Contig10824:3093..3296- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10824.3.1 ID=mRNA_D-mesarthrocarpus_Contig10824.3.1|Name=mRNA_D-mesarthrocarpus_Contig10824.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=204bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10824:3093..3296- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10824:3093..3296- >mRNA_D-mesarthrocarpus_Contig10824.3.1 ID=mRNA_D-mesarthrocarpus_Contig10824.3.1|Name=mRNA_D-mesarthrocarpus_Contig10824.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=204bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10824:3093..3296- (Discosporangium mesarthrocarpum MT17_79)back to top |