|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 338 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 336 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789215.5032995-CDS-D-mesarthrocarpus_Contig1082:18005..18104 | 1680789215.5032995-CDS-D-mesarthrocarpus_Contig1082:18005..18104 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1082 18006..18104 + |
| 1680789215.5134711-CDS-D-mesarthrocarpus_Contig1082:19955..20058 | 1680789215.5134711-CDS-D-mesarthrocarpus_Contig1082:19955..20058 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1082 19956..20058 + |
| 1680789215.5247948-CDS-D-mesarthrocarpus_Contig1082:20811..20945 | 1680789215.5247948-CDS-D-mesarthrocarpus_Contig1082:20811..20945 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1082 20812..20945 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1082.5.1 >prot_D-mesarthrocarpus_Contig1082.5.1 ID=prot_D-mesarthrocarpus_Contig1082.5.1|Name=mRNA_D-mesarthrocarpus_Contig1082.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=112bp
KARQICKSDLGGDEMAPERRRRNREEVDEDEEEAGRMPKRSNRYVSGRSD
ELGESCRQGQDWEGEVEGVLSNSHPATPNPKGKGKGKGKGKGKRVASSSM
DMVEEERNSPRG back to topmRNA from alignment at D-mesarthrocarpus_Contig1082:18006..20945+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig1082.5.1 ID=mRNA_D-mesarthrocarpus_Contig1082.5.1|Name=mRNA_D-mesarthrocarpus_Contig1082.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2940bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1082:18006..20945+ (Discosporangium mesarthrocarpum MT17_79)
AAAGCAAGACAAATCTGCAAATCTGACCTTGGCGGGGACGAGATGGCGCC
CGAACGGCGCCGTCGCAACCGAGAGGAAGTAGATGAAGATGAAGAGGAGG
TGAGAGACCTCGGAAAAATCCCTTTCTTCCTTAGTGTACCGCCCTAAACA
TACATCACACTATATGCACCACAGTGTTGGCCGGGTGCGACGACTCCAAT
CCGGAGCTCCTTGAAAGGGTTTTGGCTGTGCCCCCTTCACCGGGCGCTCC
GGTCATTGCATTCGATATAATCAGTTGATTCAAGGGTGGTGGGATAGAGA
ACGGGGCTCGCCCTGTGTCTTCCAATATATATGTGTTTGTGTGGAGAGGG
GTGTGTGTGTTGCTTTTGGTTTACTGGATGTTGTATCCTCTGCGGGACAC
CTTTTCGACCCACGACACCCCGGCAAAATGGATCGAAATCGCCAGGCGCA
GCCGCAGCAACGCCCCATTCTGAGGCATTGCCCTCCGTCCTCTAGTAGAA
TAACTTGTAGTTCCTCCACCCTGCGGACGCCCCGTTTCCCCGCGACTGGT
GTTTGTGGAACCTTCCTGAGCTTGTACGACCCCCCCCTCCTGTCCACGGC
CTGCCGCTCCTCTGCTATGATTATCATGATGATTACCATATTATCACATA
TCAATTTTGTCGCTCCCTTATCACGATTATAACATTGCGATCATTATATT
TATTGCTGTTGTCTCACGTCGTTTGATCGTGGGGTCAGGGTAAGGGATAT
AACCCCGTACTCTCATCCCCTACTTCGCCGAAGGATGGCATGTACGCATC
GGGTGGCTATACGGTGCCAGAGTGAGGGGAATACTATGGAACTAGGGTCT
AGGAGGACTCTCTCATACCGCAGTATCATATTGTGCAGAATAGGGTAAGG
GTTCGGATTAGGATTAGGTTTAGGGTTGAGTTTAGCATAATTTGAATGAG
TAAGCGATACTTCAATGTACATACATACATGCTCAGGTCTGGGGCTAAGG
TTTGGGTTAGGGTTAGATATTTGAATTCGTTGCTTTTTCACTTCAAATTA
CCTTTTGGCACTTTGGCGGATGGGTACTGGTGCTGCAAAAGTAGAACGGA
GAGACGATTGAAGGTTGAAGTAACTTGGAACAAAGCTATGCTAGTGAGAC
TAAAGCTTAACCATCAGACAAAAATGCAACATTACATAACTTGCAAGCAC
ATAACAACTGTTAGTGTGCTGACCCTAACCCTAACCGTAACCCTAACCCT
GACAACTGTTATTGTGCTATCCCTAACCTAACTGTAACCCTAACACTGCC
ATGGACTCTCTCTTCACTTGTATTCTATGCTATCACTTATCTCCTATTTT
TGTAATTGAAAGTGTGCCATGATAAATTATATTTCTGAAAAATTATTTCT
CACTGAGCAGAGACTGGCATCAATTAGATTGGCATCAAATTGGCATCATT
TGTGCCTTTTTTCTTATTTTGTATTTCCAAGTACCCCTAAGCAAGAAGAA
AGAAATAAGAAATGAGGGTTAGTGTTACCAAAAGTAAGAGCATGAAAAGT
AGGTTTCATGATCACACCAAGGAGGAAACTAAAGGAAGCCTAGCCCAAAA
GCCCTCCTTCCAAAATACACAGCCAAACCCCAACCCCAACCTAACCCCAC
CACTAACTCCAAACCCTGACCCTCACCTGAACCCTCGCCCTAACCCTACA
CCCTCCCCCTAGGAGCTTCCCTTGTGGTATTCTAACCCCAGCCCTGAACT
TATGCTTCCAAGAAAATTCTTCGAATGATAATGTCATGAACATTTTTTTG
GAGTGAGGAAAGGACATTTTTTGACAACAAAAAAAAGGTTCTCTCGATTT
TAGCGTAAACAAAGGAAAGAAAAGAAAACCGAAAGAGAAAAAAAAGAAAC
AGAATAGGGATAAAAAAAAAAACCCGTAACTGAAGCAAGAAATCAATCAG
GCTGGACGTATGCCCAAGAGGTCCAACCGGTACGTATCTGGACGCTCAGA
TGAGCTGGGGGAAAGCTGCCGCCAGGGCCAGGACTGGGAAGGAGAAGTGG
AAGGTTTGTGTATATCTGTCCATGCGAATAATAGTGCATGGTTGTTTGAA
ATATTTGTGTATGGCTGTGAACAAATGTGTATATTTATGAACAAACGTGT
ATATCTGTGAACAAATATGCATATTTGTGAACAAAAATGTGTATATTTAT
GAACAAATGTGTTTATTTGGTACAAATCTGGGCCCTCAGGCGAGCAAGGG
GAAGACTGGTTTCGTGACCAGGATTGGGAAGGGTTAGGGAAAGATTTGAA
TATGTTTCTGACAATTGTGAGTATTTGTGAATAATGTGTGGATGTTTTAT
GAAAATTGTGAATATTTGTGAATAATGTGGGTGTTTCGTGAAAATTGTGA
ATATTTGTGAATAATGTGTATGTTATATGAAAATTGTGAATACCTGTTAA
TAATATGGGTGTAGAAATTGTGAATATTTGTGAATAAGGTGGGTGTTTAT
GGAAATTGTGAATATTGTGAATAATGTGGATGGCTGTGAATATTTTTGGA
TATTGGTGGTGTGTGTGCCTCATGCTGGGCAGTTAGCTCTAAAGAAGTGG
CCCTGTGACTTCAGGCTAGGGTTAGGGTTAGGGTTAGGGTCAGGGCTCAG
GTACTCCTGCATGGTTTGGGCATGTCATCGGTTGTTCGTTGGAACCCTAT
CCCTAACCCTAACCCTAACTCTATCCCTACCCCTAACCCTAACCTTACCG
CGAATCAAGACAAGTCGAACAATAAAACTAAAGGCAGAAAGTAAATAAAA
CAGCAGGTGTGCTGAGCAATAGTCACCCTGCCACCCCTAACCCTAAGGGA
AAGGGGAAGGGGAAGGGGAAGGGGAAGGGAAAGAGAGTTGCTTCTTCCAG
CATGGACATGGTGGAAGAGGAAAGGAACAGTCCAAGGGGG back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1082:18006..20945+ >mRNA_D-mesarthrocarpus_Contig1082.5.1 ID=mRNA_D-mesarthrocarpus_Contig1082.5.1|Name=mRNA_D-mesarthrocarpus_Contig1082.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=336bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1082:18006..20945+ (Discosporangium mesarthrocarpum MT17_79)
AAAGCAAGACAAATCTGCAAATCTGACCTTGGCGGGGACGAGATGGCGCC
CGAACGGCGCCGTCGCAACCGAGAGGAAGTAGATGAAGATGAAGAGGAGG
CTGGACGTATGCCCAAGAGGTCCAACCGGTACGTATCTGGACGCTCAGAT
GAGCTGGGGGAAAGCTGCCGCCAGGGCCAGGACTGGGAAGGAGAAGTGGA
AGGTGTGCTGAGCAATAGTCACCCTGCCACCCCTAACCCTAAGGGAAAGG
GGAAGGGGAAGGGGAAGGGGAAGGGAAAGAGAGTTGCTTCTTCCAGCATG
GACATGGTGGAAGAGGAAAGGAACAGTCCAAGGGGG back to top
|