mRNA_D-mesarthrocarpus_Contig10794.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10794.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10794.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A6G0VL46_APHCR (DDE Tnp4 domain-containing protein n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VL46_APHCR)

HSP 1 Score: 92.0 bits (227), Expect = 6.460e-23
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFSLHD 216
            R  VEWG+GK+ + FAFLD KKN ++ L   G +YKVG L TN HTCLYGSQ S YF  +PP L++Y +LH+
Sbjct:    5 RQAVEWGFGKILTEFAFLDLKKNQKIHLQEVGKMYKVGVLSTNCHTCLYGSQGSNYFNILPPTLEQYLNLHN 76          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A6G0VRD5_APHCR (Protein ALP1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VRD5_APHCR)

HSP 1 Score: 89.7 bits (221), Expect = 2.190e-21
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFSL 210
            R  VEWG+GKV   FAFLD +KN +L L   G +YKVG +LTN HTCLYGSQT  YF  +PP L++Y ++
Sbjct:   60 RQAVEWGFGKVIIEFAFLDFRKNQKLLLQHVGQMYKVGVILTNCHTCLYGSQTGTYFNIVPPTLEQYLNI 129          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A226D800_FOLCA (Putative nuclease HARBI1 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226D800_FOLCA)

HSP 1 Score: 93.6 bits (231), Expect = 4.980e-21
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            R  VEWG+GKV   FAFLD KKNL+ GL    + +KVG LLTN HTC+YGSQTS+YF + PP L+RY +
Sbjct:  281 RQCVEWGFGKVIRTFAFLDFKKNLKYGLQPIANYFKVGVLLTNCHTCIYGSQTSDYFCEAPPDLERYLN 349          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A8B6E498_MYTGA (DDE Tnp4 domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6E498_MYTGA)

HSP 1 Score: 89.7 bits (221), Expect = 7.730e-21
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRY 201
            R+ VEW +GKV SLFAFLD+KKNL+L L   G  YKV  LLTN HTCLYGS+T  +F+  PP L+ Y
Sbjct:  110 RICVEWAFGKVLSLFAFLDYKKNLKLYLQPVGKYYKVAVLLTNCHTCLYGSETGIFFDVSPPTLEDY 176          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 92.0 bits (227), Expect = 2.860e-20
Identity = 42/69 (60.87%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            RV VEWG+GK+C  FAFLD KKN+++ L   G  Y V ALLTN HTCLY SQT  YFE  PP L+ Y S
Sbjct:  328 RVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDYLS 396          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: UPI00077AC7F2 (uncharacterized protein LOC107350804 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC7F2)

HSP 1 Score: 91.7 bits (226), Expect = 3.130e-20
Identity = 42/69 (60.87%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            R  VEWG+GK+C  FAFLD KKNLR+ L   G  Y V ++L N HTCLYGSQTS YF   PP L+RY S
Sbjct:  300 RTCVEWGFGKICQNFAFLDFKKNLRVLLQPVGKYYLVASILVNCHTCLYGSQTSTYFNLEPPSLERYLS 368          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A226CVX3_FOLCA (Delta-aminolevulinic acid dehydratase n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226CVX3_FOLCA)

HSP 1 Score: 91.3 bits (225), Expect = 3.510e-20
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            R  VEWG+ KV  LFAFLD KKNL++GL   G  Y VG +L+N HTCLYGSQT++YF  +PP L+ Y +
Sbjct:  278 RESVEWGFNKVIQLFAFLDFKKNLKMGLQPVGKYYIVGTILSNCHTCLYGSQTADYFNLLPPRLEEYLN 346          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: UPI001AD6F06A (uncharacterized protein LOC120846806 n=1 Tax=Ixodes scapularis TaxID=6945 RepID=UPI001AD6F06A)

HSP 1 Score: 86.3 bits (212), Expect = 8.910e-20
Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            R  VEWG+GKV +LFAF+D KKN +  L    D+Y+   LLTN HTCLYGSQTS YF+  PP L  Y S
Sbjct:   80 RQAVEWGFGKVSTLFAFVDFKKNQKHRLQRVSDMYQATTLLTNCHTCLYGSQTSTYFQLSPPTLDEYLS 148          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: A0A6S7L092_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7L092_PARCT)

HSP 1 Score: 88.6 bits (218), Expect = 1.190e-19
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFSLH 213
            RV VEWG+GK+   FAFLD KKN ++ L      Y VG+LL N HTCLYGSQTS YF+  PP L+ Y S H
Sbjct:  193 RVSVEWGFGKIAQYFAFLDFKKNQKILLQPIAKYYLVGSLLINCHTCLYGSQTSSYFDVQPPSLETYLSNH 263          
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Match: UPI00077A99CC (uncharacterized protein LOC107345875 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A99CC)

HSP 1 Score: 88.6 bits (218), Expect = 1.210e-19
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1
Query:    1 RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYGSQTSEYFEQIPPPLKRYFS 207
            RV VEWG+GK+C  FA+LD KKNL++ L   G  Y V  +L N HTCLYGSQTS +FE  PP L+ Y S
Sbjct:  195 RVNVEWGFGKICQNFAYLDFKKNLKVLLQPVGKYYLVATILINCHTCLYGSQTSSFFELEPPTLETYLS 263          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10794.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0VL46_APHCR6.460e-2356.94DDE Tnp4 domain-containing protein n=1 Tax=Aphis c... [more]
A0A6G0VRD5_APHCR2.190e-2157.14Protein ALP1-like (Fragment) n=1 Tax=Aphis cracciv... [more]
A0A226D800_FOLCA4.980e-2160.87Putative nuclease HARBI1 n=1 Tax=Folsomia candida ... [more]
A0A8B6E498_MYTGA7.730e-2161.19DDE Tnp4 domain-containing protein n=1 Tax=Mytilus... [more]
UPI000A2A66BF2.860e-2060.87protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
UPI00077AC7F23.130e-2060.87uncharacterized protein LOC107350804 n=1 Tax=Acrop... [more]
A0A226CVX3_FOLCA3.510e-2057.97Delta-aminolevulinic acid dehydratase n=1 Tax=Fols... [more]
UPI001AD6F06A8.910e-2057.97uncharacterized protein LOC120846806 n=1 Tax=Ixode... [more]
A0A6S7L092_PARCT1.190e-1957.75DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
UPI00077A99CC1.210e-1957.97uncharacterized protein LOC107345875 n=1 Tax=Acrop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10794contigD-mesarthrocarpus_Contig10794:1..228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7029.ACYPI34512-PA
PFAMsDDE_Tnp_4
Model size228
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.9e-20
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota
Descriptionnuclease activity
Cds size228
COG categoryB
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789212.8192813-CDS-D-mesarthrocarpus_Contig10794:0..2281680789212.8192813-CDS-D-mesarthrocarpus_Contig10794:0..228Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10794 1..228 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10794.1.1prot_D-mesarthrocarpus_Contig10794.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10794 1..228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10794.1.1

>prot_D-mesarthrocarpus_Contig10794.1.1 ID=prot_D-mesarthrocarpus_Contig10794.1.1|Name=mRNA_D-mesarthrocarpus_Contig10794.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=76bp
RVYVEWGYGKVCSLFAFLDHKKNLRLGLMLAGDIYKVGALLTNMHTCLYG
SQTSEYFEQIPPPLKRYFSLHDHGA*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10794:1..228+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10794.1.1 ID=mRNA_D-mesarthrocarpus_Contig10794.1.1|Name=mRNA_D-mesarthrocarpus_Contig10794.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=228bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10794:1..228+ (Discosporangium mesarthrocarpum MT17_79)
AGGGTCTATGTTGAATGGGGATATGGGAAGGTTTGTTCCCTCTTTGCATT CCTAGATCACAAGAAGAATCTCAGACTTGGCCTCATGCTAGCTGGAGACA TCTACAAGGTGGGGGCGCTGCTGACGAACATGCACACCTGCCTGTACGGT AGCCAAACCTCAGAGTACTTTGAGCAAATCCCTCCCCCCTTGAAGAGGTA CTTTAGCCTGCACGACCATGGTGCTTGA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10794:1..228+

>mRNA_D-mesarthrocarpus_Contig10794.1.1 ID=mRNA_D-mesarthrocarpus_Contig10794.1.1|Name=mRNA_D-mesarthrocarpus_Contig10794.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=228bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10794:1..228+ (Discosporangium mesarthrocarpum MT17_79)
AGGGTCTATGTTGAATGGGGATATGGGAAGGTTTGTTCCCTCTTTGCATT
CCTAGATCACAAGAAGAATCTCAGACTTGGCCTCATGCTAGCTGGAGACA
TCTACAAGGTGGGGGCGCTGCTGACGAACATGCACACCTGCCTGTACGGT
AGCCAAACCTCAGAGTACTTTGAGCAAATCCCTCCCCCCTTGAAGAGGTA
CTTTAGCCTGCACGACCATGGTGCTTGA
back to top