mRNA_D-mesarthrocarpus_Contig10787.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.870e-22 Identity = 74/165 (44.85%), Postives = 92/165 (55.76%), Query Frame = 2
Query: 128 VAFLPLDND-PESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEA-VESN-CTLPPPEPLALQELSKRVFMVLLRLVGQEMTAFSEH---------ESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLAS-SAREPETLVE 583
+AFLP DND P ++ V +AN LG LL PFP F S VL D + FLDTFLR RRR E V SN PE AL +L++RV +LLRLVG E+ A + L QSG+L+ ALLDVCA+Y +N+ LL L A+ +A PE E
Sbjct: 217 LAFLPKDNDAPPDTTGPVAQANSALGALLLLPFPDFSSIVLQDSGLGQFLDTFLRHRRRQHELEVRSNPAEFTGPESQALVQLTRRVLALLLRLVGPEVAALEQQLHVTPGAPAARAYGGALTQSGLLSVPALLDVCAIYGVANANLLRGLFAALAALRPELPAE 381
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: D8R6L0_SELML (CUE domain-containing protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R6L0_SELML) HSP 1 Score: 69.7 bits (169), Expect = 2.700e-10 Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = 2
Query: 110 EPPLKLVAFLPLDNDPESSSVAV-ERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCTLPPPEPLALQELSKRVFMVLLRLVGQEMTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLAS 553
+P L VA+LP D S ++ + + N EL RLL F V +ES+ FL+++L +RRR ++ + +P + +LS+RVFMVLLR+ E S + + + + + A LL+VCA+Y N L +L+++
Sbjct: 37 KPGLVFVAYLPQDEANSSQALEIIDFLNAELSRLLRMKAREFWEEVTANESLHEFLESYLLYRRRWYDLHPTGGVVPGED-----DLSRRVFMVLLRMCSDEDPGLSRISAAKFRVEDKFNV---AKLLNVCAIYGHDNPELTRRLVST 177
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A2V0PFW3_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PFW3_9CHLO) HSP 1 Score: 68.2 bits (165), Expect = 9.490e-10 Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 2
Query: 134 FLPLDNDPES---SSVAVERANLELGRLLAYPFPMFLSYVLGDE-SVRNFLDTFLRFRRRHFEAVESNCTLPPPEPLALQELSKRVFMVLLRLVGQEMTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLA 550
FLP DN S S A+E N +LG+LL F + VL D+ S+ + LD+FLRF+RR F+ P LA E+S+RVFMV LR+V E + + + +L +LD+ A+Y SN L +L+A
Sbjct: 9 FLPADNAELSDLASRAALEAINEDLGQLLRLSPGDFWAAVLSDDRSLHDCLDSFLRFKRRGFDGDADGVAGAPSRALA--EVSRRVFMVFLRMVSDEPGPGAPPPARRAAEIYDRWLLDFPKMLDLAAIYGPSNPALAARLVA 149
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A150GHE4_GONPE (CUE domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GHE4_GONPE) HSP 1 Score: 63.2 bits (152), Expect = 2.660e-8 Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 2
Query: 134 FLPLDNDPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHF----EAVESNCTLPPPEPLALQELSKRVFMVLLRLVG-QEMTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPL----LGKLLASSAREPETL 577
FLP DN + + N +L RLL+ P F + V ++S+R LDT+LR++RR + E VE + A Q+L++RVFM LLR+V ++ LL S L L+D+ LY N L +G+LL+ R + L
Sbjct: 21 FLPKDNQTWQAEDVINTINDDLARLLSLPASDFWAVVRSNDSLRICLDTYLRYKRRAYDEFREDVEGTSS-------ASQQLARRVFMTLLRMVTPRDRDPGGPPPEQQAALLYDSWTLDVPKLMDIAVLYGGQNRELVRRFMGQLLSLQPRYRDDL 170
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A835Y4N3_9CHLO (CUE domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y4N3_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 1.210e-7 Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 2
Query: 134 FLPLDNDPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCTLPPPEPLALQELSKRVFMVLLRLVG-QEMTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLL 547
FLP DN + + N +L LL+ P F V DES+ LD++LR +RR ++ + A Q+L++RVFM+LLRLV +E S L+ +L L+DV LY N L+ K +
Sbjct: 23 FLPKDNQTWQADDVIRSINDDLAHLLSLPAAQFWLVVRTDESLHVCLDSYLRHKRRVYDEYREDVE---GASAASQQLARRVFMILLRLVTPREQDPGGPPRSEQAQLVYDMWLLDVPKLMDVAVLYGTHNRELVRKFM 158
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A8J4FK15_9CHLO (CUE domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FK15_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 1.630e-7 Identity = 51/152 (33.55%), Postives = 70/152 (46.05%), Query Frame = 2
Query: 122 KLVAFLPLDNDPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHF----EAVESNCTLPPPEPLALQELSKRVFMVLLRLVGQEMTAFSEHESGVWV------LLAQSGILAPAALLDVCALYERSNSPLLGKLL 547
+ + FLP DN + + N L LL+ P F S V DES+ LDT+LR++RR + E VE T QEL++RVFM+LLR+V S+ + G +L +L L+DV LY N L K L
Sbjct: 16 RYLPFLPKDNQTWQADDVIRSINDNLAHLLSSPDEDFWSTVEKDESLHVCLDTYLRYKRRVYDDLREEVEGASTTS-------QELARRVFMILLRMVTT-----SDRDPGAPTREQQAQMLYNLWLLDIPKLMDVAVLYGAHNPELTRKFL 155
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: A0A250WS57_9CHLO (CUE domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WS57_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 1.660e-7 Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 2
Query: 125 LVAFLPLDND---PESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCTLPP-----PEPLALQELSKRVFMVLLRLVGQE---MTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLL 547
++ FLP DN + S A+ AN +L LL F+S V + S+ +D+FLRF+RR ++ + P + A++ LSKR+FMVLLRLV E M +E S L+ +L L+DV LY +N KL+
Sbjct: 1 MLPFLPQDNKLLTDQYSEPAISAANEKLSFLLCLRPNEFVSAVRTETSLGKTIDSFLRFKRRVHDSYHRGDSNEPLHTYVEDSPAMKVLSKRIFMVLLRLVSPEPNIMDMMAEQAS----LIKSHRLLDVPKLMDVAVLYGPANPEPCRKLM 148
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: UPI000B7984BD (LOW QUALITY PROTEIN: uncharacterized protein LOC110639966 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B7984BD) HSP 1 Score: 61.6 bits (148), Expect = 1.790e-7 Identity = 49/146 (33.56%), Postives = 67/146 (45.89%), Query Frame = 2
Query: 152 DPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCT-LPPPEPLALQELSKRVFMVLLRLVGQE----MTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLASSAREPET 574
DP S V+ N EL RLL F V D S+ FLD+FL+FR R ++ + + ELS+RVFMVL R+ A + VLL + L LLD+CA+Y N L +LL +A + +T
Sbjct: 1537 DPVESQRVVDLLNRELSRLLKLSPREFWREVASDNSLPEFLDSFLKFRSRWYDFPHRGAKGIVAGVIVGEHELSRRVFMVLYRISSNRDPGARAADTLSSRDHAVLLQEKRFLDIPKLLDICAMYGHENEEL-SQLLVENALQAQT 1681
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: UPI00155B07EC (uncharacterized protein LOC117907379 n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155B07EC) HSP 1 Score: 60.8 bits (146), Expect = 3.260e-7 Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = 2
Query: 152 DPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCT-LPPPEPLALQELSKRVFMVLLRLVGQE----MTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLASS 556
DP S V+ +N EL RLL F V D S+ +FLD+FL+FR R ++ + + ELS+RVFMVL R+ A + VLL + +L LLD+CA+Y N L L+ ++
Sbjct: 1476 DPLESQRVVDLSNKELSRLLKLSPREFWKQVASDNSLHDFLDSFLQFRSRWYDFPHHGVKGIVAGVIVGDFELSRRVFMVLFRISSNRDPDARAADTLSSKDHAVLLQEKRLLDLPRLLDICAIYGCENEDLTRSLVVNA 1615
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Match: UPI0018AEFA85 (activating signal cointegrator 1 complex subunit 2 isoform X1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEFA85) HSP 1 Score: 59.7 bits (143), Expect = 7.150e-7 Identity = 51/179 (28.49%), Postives = 78/179 (43.58%), Query Frame = 2
Query: 119 LKLVAFLPLDN-------------DPESSSVAVERANLELGRLLAYPFPMFLSYVLGDESVRNFLDTFLRFRRRHFEAVESNCT-LPPPEPLALQELSKRVFMVLLRLVGQ--------EMTAFSEHESGVWVLLAQSGILAPAALLDVCALYERSNSPLLGKLLASSAREPETLVEGV 589
L V +LP D D E S V+ N EL +LL F V +ES+ FLD++L+FR R ++ + + EL +RVFMVL R+ + + EH + LL + +L LLD+CA+Y N L G L+A++ + L + +
Sbjct: 71 LSFVNYLPQDEAVASGLGAGDGGVDAEESQRVVDILNEELSQLLKMTPRDFWREVARNESLHEFLDSYLQFRHRWYDLPHRGAKGMVAGVVVGELELCRRVFMVLYRISSNKDPGVKASDGLSAKEHTA----LLQEKKLLDLPKLLDICAIYGHENRELTGLLVANALKAQLALTDNI 245 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10787.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10787.3.1 >prot_D-mesarthrocarpus_Contig10787.3.1 ID=prot_D-mesarthrocarpus_Contig10787.3.1|Name=mRNA_D-mesarthrocarpus_Contig10787.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=193bp MSATAGKLNWLDRHKREPPLKLVAFLPLDNDPESSSVAVERANLELGRLLback to top mRNA from alignment at D-mesarthrocarpus_Contig10787:2136..3729+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10787.3.1 ID=mRNA_D-mesarthrocarpus_Contig10787.3.1|Name=mRNA_D-mesarthrocarpus_Contig10787.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1594bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10787:2136..3729+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10787:2136..3729+ >mRNA_D-mesarthrocarpus_Contig10787.3.1 ID=mRNA_D-mesarthrocarpus_Contig10787.3.1|Name=mRNA_D-mesarthrocarpus_Contig10787.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=579bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10787:2136..3729+ (Discosporangium mesarthrocarpum MT17_79)back to top |