mRNA_D-mesarthrocarpus_Contig1078.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1078.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig1078.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1078.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1078contigD-mesarthrocarpus_Contig1078:7778..8270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size495
Hectar predicted targeting categoryother localisation
Exons1
Cds size492
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789211.1273363-CDS-D-mesarthrocarpus_Contig1078:7778..82701680789211.1273363-CDS-D-mesarthrocarpus_Contig1078:7778..8270Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1078 7779..8270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1078.3.1prot_D-mesarthrocarpus_Contig1078.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1078 7779..8270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1078.3.1

>prot_D-mesarthrocarpus_Contig1078.3.1 ID=prot_D-mesarthrocarpus_Contig1078.3.1|Name=mRNA_D-mesarthrocarpus_Contig1078.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=164bp
AERGEEGGVETLLIGSVRRGDGEHLQGDLQGARQCRRDVDPIHDGNRNDL
AMPLDMQRANPHIEGPLLAQNARSFARALVSRAQMSGELLGGSMGSGICQ
TPAFSSPPQHIPGGEIARLNDNGAPLTCLNTDPTLGLNTNQKDSGHWVFL
VGLAPSQGDKRKKG
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mRNA from alignment at D-mesarthrocarpus_Contig1078:7778..8270-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1078.3.1 ID=mRNA_D-mesarthrocarpus_Contig1078.3.1|Name=mRNA_D-mesarthrocarpus_Contig1078.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=493bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1078:7778..8270- (Discosporangium mesarthrocarpum MT17_79)
GCAGAGAGAGGGGAAGAGGGAGGGGTAGAAACCCTGCTGATAGGATCAGT
GAGGAGGGGAGATGGGGAGCACTTGCAGGGCGACCTTCAGGGAGCCAGGC
AATGCAGGAGGGATGTTGATCCCATTCATGACGGCAACAGGAATGATCTT
GCCATGCCCTTAGACATGCAGCGTGCCAACCCCCACATTGAGGGGCCTTT
GTTGGCGCAGAATGCCCGTAGCTTTGCCAGAGCCCTCGTGTCGCGAGCCC
AGATGAGTGGAGAGCTCCTGGGCGGCAGCATGGGCTCTGGGATTTGTCAA
ACCCCGGCCTTTTCGTCCCCTCCTCAGCACATCCCAGGGGGTGAGATAGC
AAGGTTGAATGACAACGGTGCACCCTTGACGTGTCTAAACACTGACCCTA
CTCTCGGCCTCAACACAAACCAGAAGGACAGTGGACACTGGGTCTTTCTT
GTAGGCCTCGCCCCATCACAGGGCGACAAGAGGAAAAAGGGGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1078:7778..8270-

>mRNA_D-mesarthrocarpus_Contig1078.3.1 ID=mRNA_D-mesarthrocarpus_Contig1078.3.1|Name=mRNA_D-mesarthrocarpus_Contig1078.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=492bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1078:7778..8270- (Discosporangium mesarthrocarpum MT17_79)
GCAGAGAGAGGGGAAGAGGGAGGGGTAGAAACCCTGCTGATAGGATCAGT
GAGGAGGGGAGATGGGGAGCACTTGCAGGGCGACCTTCAGGGAGCCAGGC
AATGCAGGAGGGATGTTGATCCCATTCATGACGGCAACAGGAATGATCTT
GCCATGCCCTTAGACATGCAGCGTGCCAACCCCCACATTGAGGGGCCTTT
GTTGGCGCAGAATGCCCGTAGCTTTGCCAGAGCCCTCGTGTCGCGAGCCC
AGATGAGTGGAGAGCTCCTGGGCGGCAGCATGGGCTCTGGGATTTGTCAA
ACCCCGGCCTTTTCGTCCCCTCCTCAGCACATCCCAGGGGGTGAGATAGC
AAGGTTGAATGACAACGGTGCACCCTTGACGTGTCTAAACACTGACCCTA
CTCTCGGCCTCAACACAAACCAGAAGGACAGTGGACACTGGGTCTTTCTT
GTAGGCCTCGCCCCATCACAGGGCGACAAGAGGAAAAAGGGG
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