mRNA_D-mesarthrocarpus_Contig1078.13.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1078.13.1
Unique NamemRNA_D-mesarthrocarpus_Contig1078.13.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.930e-79
Identity = 121/199 (60.80%), Postives = 156/199 (78.39%), Query Frame = 2
Query:  275 SSLAQDASSGNGFEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDPSVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLGLV 871
            SS   +    + F+VL+RDLAYSGWRKIV+  VR+       FDV+ Q++PSVAVFVWHT++ TLTLIKE+APGRE ++HGVVAG+YE +KH  PLQAA+YELEEEAHL+GG W+ L +D++TTI ADKYS+NEFYCWL VDP+   +P+P D EEFIEI  GVS+QE + M+ RGE+SI+S F +++ A KLR LGL+
Sbjct:   36 SSPVGEGKPQHDFKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLL 234          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 6.000e-44
Identity = 90/204 (44.12%), Postives = 121/204 (59.31%), Query Frame = 2
Query:  260 PSKIESSLAQDASSGNGFEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDP-SVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHS-GPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLG 865
            PS+IE    Q         ++S ++ YS WRKI+R  V+ P G+  +FD++ Q    +V +F W +++KT TL++EY PG     HGV AGL E  KH   P  AA++ELEEE HL GG WY L  D   T+  DKY   E   +L +DP T  +PRP D EE IEI +GVS+ E   MI  G ++++ G+  MLA EKLR LG
Sbjct:   26 PSQIEVPQPQQQQ----HRIISDEVVYSRWRKIIRRVVQFPAGNTVDFDIVDQKGTGAVTIFAWCSKTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLTADG-ATVPMDKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELG 224          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A448Z503_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z503_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.730e-39
Identity = 82/196 (41.84%), Postives = 117/196 (59.69%), Query Frame = 2
Query:  293 ASSGNG---FEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLS--QDDPSVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLG 865
            A SG G   FE+L  ++ YSGWR I +  VRM  G V +FD++     + +V +F W ++SKT T+I+EY P    +  G+ AGL E         AA++ELEEE HL GG W PLL       A DKYST    C+L +DP   ++P+P D EE IEI +GV++ E L  +  GE++++ G+  +LA +KL+ LG
Sbjct:   90 ADSGTGDKTFEILEENIVYSGWRTINKRIVRMRNGKVVDFDLVGVKTGEGAVLIFAWDSKSKTATMIREYMPASHRVLWGLAAGLIEDKHEHNTELAARHELEEECHLKGGRWIPLLTQPA---AMDKYSTTTIQCYLVIDPEPEENPKPLDDEEDIEIVSGVTIPEILEFVRNGEMNLVGGYGSLLAIQKLQELG 282          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH)

HSP 1 Score: 145 bits (366), Expect = 5.730e-37
Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = 2
Query:  377 MPTGHVANFDVLSQDDPSVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLGL 868
            +P G   ++D+++Q   SV VFVW T S T TL+KEY PG   +  G VAG+ E  KH+  LQAAQ+ELEEEAHL    WY LL +E   +  DKYS N F  +L +D    KS +P D EE+I I   V+  E + ++A G+++++S +TIML  +KL+ LG+
Sbjct:    2 LPHGQKVDYDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLL-NEGAIMPFDKYSNNRFIPYLALDCEPVKSAKPLDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLGI 164          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.860e-36
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 2
Query:  311 FEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDP-SVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETS---KHSGPLQAAQYELEEEAHLMGGVWYPLLQDEK------TTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLG 865
            +E+L  ++ +  WR I+   VRMP G+V ++DV+ Q    +V +FVW++++KT TL++EY PG   I +GV AGL E      H  P QAA  ELEEE HL GG W+ L           T++  DKY+      +L +D     +P+P D EE IEI   V++ E L +I  GE++++ G+  +LA EKLR LG
Sbjct:   98 YELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLG 292          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A2C6KYJ8_9APIC (Nudix family protein n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KYJ8_9APIC)

HSP 1 Score: 128 bits (322), Expect = 2.240e-30
Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 2
Query:  260 PSKIESSLAQDASSGNGFEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDPSVAVFVWHTESKTLTLIKEYAPG-REVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSL 862
            P+   + +AQ  +S     VLS  +AY GWR +++  V+ P G    FD+ +   P+V V  W ++++TLTL++EY PG  +   + +VAGL+E  KH+      ++E EEEA L GG   P++  E  T+   KY+  +F  ++ +D       RP D +E I+   GVS+ EAL +I  G ++  S   ++LA EKLR +
Sbjct:    5 PTPSAARIAQLVASPEHLPVLSDVVAYKGWRNVIKRTVQFPNGKPVTFDITTAP-PAVLVLPWCSQTRTLTLLREYCPGLNDKHMYTLVAGLFE-EKHATIEDCIRWETEEEAQLRGGRLVPVMNSEDRTLPGAKYTAQKFIPYIVMDAEKVTDSRPLDDDEIIQPVHGVSVNEALWLIMNGRMTSTSSMMVLLALEKLRQM 204          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A8H7PUL1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PUL1_MORIS)

HSP 1 Score: 110 bits (276), Expect = 3.280e-24
Identity = 62/191 (32.46%), Postives = 102/191 (53.40%), Query Frame = 2
Query:  296 SSGNGFEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDPS---VAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTT-IAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLR 856
            + G    +L  ++ +  +  +     R   G   ++DV+    P    V VF + T +KT  ++KEYA G   I +   AG ++  KH+ PL+AAQ+EL EEAHL GG W  LL   +   I+  K+ TN F  ++C++P   ++P+  D EE++EI   V++++    +  GEV + S  T  +A E L+
Sbjct:    5 TDGTAATILKDEIIHKRYITVWNRTTRFEDGREISWDVVGHSTPLPTFVTVFTFDTNTKTTCILKEYAQGTNEIKYCCTAGSFDRRKHTDPLEAAQHELSEEAHLKGGSWVSLLPTAQPNGISELKWGTNRFVPYICINPVLDENPKDRDAEEYMEIVRDVTIEQFTQFVMSGEVMLPSVQTGWMAIEWLK 195          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A7S0BNC4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNC4_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 4.300e-14
Identity = 50/131 (38.17%), Postives = 65/131 (49.62%), Query Frame = 2
Query:  473 LIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEKLRSLG 865
            +I+EY P +    +G   G  E SKH  PL A Q ELEEEA L GG W+PLL D       DKY  +  Y +L VD    ++    D+EE I IE  V +      I +GE+      T +L    L+ LG
Sbjct:    1 MIREYFPAQHKFHYGFPGGNVE-SKHGSPLSAIQAELEEEAGLYGGEWFPLL-DVGRAAPQDKYQEDCLYMYLVVDSQVKETETSTDLEEIITIEHEVPISVVHDRIYKGELQANGIATFLLGLRHLKLLG 129          
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Match: A0A2G9NEI6_9ARCH (Nudix hydrolase domain-containing protein n=1 Tax=Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_32_14 TaxID=1974441 RepID=A0A2G9NEI6_9ARCH)

HSP 1 Score: 68.9 bits (167), Expect = 9.970e-10
Identity = 51/185 (27.57%), Postives = 95/185 (51.35%), Query Frame = 2
Query:  311 FEVLSRDLAYSGWRKIVRNEVRMPTGHVANFDVLSQDDPSVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKHSGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVDPHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGF-TIMLAAEKLRSL 862
            +E +S D+ YSG+RK++R + ++P G+++++D++  +D  V +F    ++  + LI++Y PG E     V  GL E ++   PL  A+ EL EE    G + Y       ++     Y T + YC++  +    K     D +EFI+I   + + E    +   ++ I++ F T+ L  + L  L
Sbjct:   21 WEKVSEDIKYSGYRKMLRKQFKLPNGNISDYDIVKSND-GVNIFAIDDQNNVI-LIEQYRPGPEKKIISVPGGLIENNED--PLDCAKRELLEETGYTGNLIYV------SSFYTWSYGTEKIYCFVATNCKKVKYDY-IDNQEFIKI-IKIPINEFRLKLKNRDLGIMNEFLTVYLCLDYLNKL 193          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1078.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G6B3_ECTSI1.930e-7960.80Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A6U2S3A3_9STRA6.000e-4444.12Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448Z503_9STRA2.730e-3941.84Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A482S980_9ARCH5.730e-3745.12NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A7S1ZSI2_9STRA2.860e-3640.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A2C6KYJ8_9APIC2.240e-3035.15Nudix family protein n=1 Tax=Cystoisospora suis Ta... [more]
A0A8H7PUL1_MORIS3.280e-2432.46Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A7S0BNC4_9RHOD4.300e-1438.17Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2G9NEI6_9ARCH9.970e-1027.57Nudix hydrolase domain-containing protein n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1078contigD-mesarthrocarpus_Contig1078:18229..21304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6B3
PFAMsNUDIX
Model size1930
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue2.3e-85
EggNOG OGs2CFIT@1|root,2S4K6@2759|Eukaryota
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-10_001220.1
Cds size777
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789211.3757987-UTR-D-mesarthrocarpus_Contig1078:18228..192811680789211.3757987-UTR-D-mesarthrocarpus_Contig1078:18228..19281Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1078 18229..19281 -
1680789211.4423645-UTR-D-mesarthrocarpus_Contig1078:21204..213041680789211.4423645-UTR-D-mesarthrocarpus_Contig1078:21204..21304Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1078 21205..21304 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789211.4045513-CDS-D-mesarthrocarpus_Contig1078:19281..195781680789211.4045513-CDS-D-mesarthrocarpus_Contig1078:19281..19578Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1078 19282..19578 -
1680789211.4147832-CDS-D-mesarthrocarpus_Contig1078:20313..204751680789211.4147832-CDS-D-mesarthrocarpus_Contig1078:20313..20475Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1078 20314..20475 -
1680789211.4300203-CDS-D-mesarthrocarpus_Contig1078:20886..212041680789211.4300203-CDS-D-mesarthrocarpus_Contig1078:20886..21204Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1078 20887..21204 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1078.13.1prot_D-mesarthrocarpus_Contig1078.13.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1078 19282..21204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1078.13.1

>prot_D-mesarthrocarpus_Contig1078.13.1 ID=prot_D-mesarthrocarpus_Contig1078.13.1|Name=mRNA_D-mesarthrocarpus_Contig1078.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=259bp
MAVVRRTMLTLLAASRCIASRQRPQVFSAWANSGGHIAFRGHGGGGGAGK
GRPPSKIESSLAQDASSGNGFEVLSRDLAYSGWRKIVRNEVRMPTGHVAN
FDVLSQDDPSVAVFVWHTESKTLTLIKEYAPGREVISHGVVAGLYETSKH
SGPLQAAQYELEEEAHLMGGVWYPLLQDEKTTIAADKYSTNEFYCWLCVD
PHTAKSPRPADIEEFIEIEAGVSLQEALGMIARGEVSIISGFTIMLAAEK
LRSLGLVA*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1078:18229..21304-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1078.13.1 ID=mRNA_D-mesarthrocarpus_Contig1078.13.1|Name=mRNA_D-mesarthrocarpus_Contig1078.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3076bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1078:18229..21304- (Discosporangium mesarthrocarpum MT17_79)
TAAGGTCACCAATAAGAAAACGTATGTTACTTTCTTCCCAGTCGGTTGAG GTGTCCTTTTCCTTTGTCTACTAGGCACTCCTGAAAAACCCTGGGAAACA ATGGCCGTGGTGCGGAGGACGATGCTCACCCTACTAGCTGCCTCTAGGTG TATCGCGTCAAGGCAACGCCCGCAAGTCTTCTCCGCGTGGGCAAACAGCG GGGGTCACATTGCCTTTCGCGGCCACGGCGGCGGAGGCGGGGCCGGCAAG GGCCGCCCGCCGTCGAAGATTGAGAGCTCATTGGCCCAAGACGCCAGCTC TGGAAACGGGTTTGAGGTGCTGAGCAGGGATCTCGCGTACTCGGGCTGGA GGAAGATCGTCAGGAATGAGGTTCGCATGCCAACCGGGCATGTTGCCAAC TTCGACGTCCTGTCTCAGGTACTTGTGTGTCGTGTGCAAATGATGGGGTA TTTCACGAGATGCGATGGCCTCTCGGTTGAGATGAGACGAGTTCCTCCAA TCCAAAGAACCCCTTCCGCCCCGCTCTCCCTCTTCTTAGCCTAAGAAGCC GGGGGTCGCCGGCACGACACCCCTTTGTCGAGCTGCCAGCTGTGGTCTGA TTCCCCGTTTCCGGTATTCGGTATTCGGCGCCTTGTTGCCCGATGTCATC CCCCTTCGCCCACAAATATCACCAAGGACTGCCCCTGTCACCCACCCGTC TACTCTCTCTTACCTTCCCGCAAAATAAGACGAAAAATTATGTGGGGCGC AAGGGACACGGTATGTATGCCCTGTTTCCACTATCAACATGGAACTTGCG GATACTTCTCCCTTACGCATACGTTACAGGATGACCCCTCCGTTGCAGTT TTTGTGTGGCATACGGAGTCCAAGACGCTGACCCTTATTAAGGAGTATGC CCCTGGAAGGGAAGTTATCTCTCACGGGGTGGTAGCTGGCTTATACGAGA CCAGCAAGCACTCAGGGCCATTGCAAGCAGCACAATACGAGGTAAGCGGA GCATTCTTGTTCATCCATGGACTGTTAGGGTGTCCCATGGTTCTGCGGCA TCTTTCCCCAGGATGGTTCCTTTTGATTTGTATCAATATGCAAGTGTCAA GGAGAGTGCCGACTGCCACACTCAGTTTGAGTAGCTTGTTGATGCAGAGT ATCCATACTCAACGAGAACTGAAACACCAGACGAAAGCCTGATTCCTTGT ATGAAGCATAGCAGGACAGGGATCTCTCACCCAATGCCTTCCTGTTAACA TGGAGATTCAGAGATTGCCAAGACCCGCTGGAAAAACGTAGGGGAAGAAC AAGTATGCCGAGAAATTTTCAGGAAGCGAGAGCACAGGTCTATGTTTGGA GGCCACATTTCCGTCGACATCCCCTAGCCTTCCACCTCTCGCCCTACACA CGTATGTAGATGCTGTTTAGGCAGCATTTAGAAACATTTTCCCCCCCCCT TGATAAACTTTGCGAAGCAGGAAGGACTTGAGCGCCACCTCGCCCCCTTC TTCACTTCCCCTGCAACATGGCAGTCTCGTTTGCCCAACATCCAGGAGTT CCTTCCCCCTCCAACAAAATATGTCTCGGGCCCTCCCCGTAAACCAGCAG AACAAGAGGTAGCCCCCCCACGGTTCTCAGGTTTGCAGCCACCAAACATA TCCGTATTCCCCCCACCCTCCCCTCTTCCCCCCCCTACCTCTCCTCTTTT CCCGCCCCCGCCCCCATGGCTGGTAGCTGGAAGAGGAGGCCCACCTCATG GGAGGGGTGTGGTATCCACTTCTCCAGGACGAAAAGACTACCATTGCAGC GGACAAATACTCCACCAACGAGTTCTACTGCTGGCTGTGTGTCGACCCCC ACACCGCCAAGTCCCCCCGCCCCGCAGATATTGAGGAGTTCATAGAGATC GAGGCAGGTGTCTCCCTGCAGGAGGCCCTTGGGATGATCGCCCGGGGGGA GGTGTCCATCATCTCTGGCTTCACCATCATGCTCGCCGCTGAGAAGCTGC GCAGCCTTGGGCTCGTGGCATAAACCCAGGCCTGACCCAAACACTAGCCC CAAACCTAACCCTAAGGCCGGACTTTGAAGAATTCGGGCTTTTCAACACT TGACAGCCCATAGCCAAAAAGTGATTCCTGGGTCAATGACAGGCCAGCAC GGAGACAGACTATTTGAGTCCCATGAACTAGTTGAGTCCGATAAAGTTCA AAAAGCCTTTCTAAATACAAGGCCTAACCCTGTCCCCCTTCCCAGGCGTG TTTAAAGTTTTGATCATTGATGTACTGTGCATTCTTGGGAGCAACACAGC CTAGTGTTTTAAGCTTAGCAGGAGGCGTAGTAGCTAATCCCAAGGGGTGT TGGTAAAGATGTTAGGGCACGTTGACGTGGTCATCTGTGTCAGAGGGAAA AGTTCCCGTTGGAGGGGTACAGGAGAGGGTGTCATCTGGCAGTGAAGCAG CCCCCCCCCCCCCCCTCCTCCGATAGTTAGTTTCCCACAACGAATATTAT TGATTAAGTGTAAGGAGTTGTTTCACAGGTTATTAGCCGGATAGTAGCGG TCAACAGCAAGAACACAGGCAGATAGATCATGGGTAAGCCTCAGGCGTGC CCTTCGAAACTGGAATGAGGGCAGGGTTGTGGCAGGTTACCTGCACTGCA AATGGGCAGGATGGGGCAACTATCATGCCTGCTTAATTATCGCCCCTGAA ATTGATTCCAGTGGGAGCTGGGGGTCTTTTTTTTTTATTGCCTCGCTGCT GCTGCAGATGCTGATGCTGCTGCAGAGTGAGCAATTCATGCACGGCATGA GAATGTGACCTTTGACCTGCTCATTGATGGCCGACTGGCATGCTCCTGGA GTATTTTTGTGTGGATACGCAACCGATTGGTCGCCAAACAGTGAGCCAAT CACAAGAGAAAGGTCCAAAAGACATGCACTGAGAAGGGGAAACCCATGGC CATATGAGTCTCGGGCTGGCTTCCTTCACCTCAGCTGCCGATTGACATGC TTCGTTGGGTTGGTTGCCACCGACTACATTTATTTGTCTTGCAACCTTGA CATGATCACCAAATTATGTATTTTTC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1078:18229..21304-

>mRNA_D-mesarthrocarpus_Contig1078.13.1 ID=mRNA_D-mesarthrocarpus_Contig1078.13.1|Name=mRNA_D-mesarthrocarpus_Contig1078.13.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=777bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1078:18229..21304- (Discosporangium mesarthrocarpum MT17_79)
ATGGCCGTGGTGCGGAGGACGATGCTCACCCTACTAGCTGCCTCTAGGTG
TATCGCGTCAAGGCAACGCCCGCAAGTCTTCTCCGCGTGGGCAAACAGCG
GGGGTCACATTGCCTTTCGCGGCCACGGCGGCGGAGGCGGGGCCGGCAAG
GGCCGCCCGCCGTCGAAGATTGAGAGCTCATTGGCCCAAGACGCCAGCTC
TGGAAACGGGTTTGAGGTGCTGAGCAGGGATCTCGCGTACTCGGGCTGGA
GGAAGATCGTCAGGAATGAGGTTCGCATGCCAACCGGGCATGTTGCCAAC
TTCGACGTCCTGTCTCAGGATGACCCCTCCGTTGCAGTTTTTGTGTGGCA
TACGGAGTCCAAGACGCTGACCCTTATTAAGGAGTATGCCCCTGGAAGGG
AAGTTATCTCTCACGGGGTGGTAGCTGGCTTATACGAGACCAGCAAGCAC
TCAGGGCCATTGCAAGCAGCACAATACGAGCTGGAAGAGGAGGCCCACCT
CATGGGAGGGGTGTGGTATCCACTTCTCCAGGACGAAAAGACTACCATTG
CAGCGGACAAATACTCCACCAACGAGTTCTACTGCTGGCTGTGTGTCGAC
CCCCACACCGCCAAGTCCCCCCGCCCCGCAGATATTGAGGAGTTCATAGA
GATCGAGGCAGGTGTCTCCCTGCAGGAGGCCCTTGGGATGATCGCCCGGG
GGGAGGTGTCCATCATCTCTGGCTTCACCATCATGCTCGCCGCTGAGAAG
CTGCGCAGCCTTGGGCTCGTGGCATAA
back to top