mRNA_D-mesarthrocarpus_Contig10775.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10775.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10775.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10775.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10775contigD-mesarthrocarpus_Contig10775:944..2145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size272
Hectar predicted targeting categoryother localisation
Exons3
Cds size258
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.5286946-UTR-D-mesarthrocarpus_Contig10775:943..9561680789210.5286946-UTR-D-mesarthrocarpus_Contig10775:943..956Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10775 944..956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.5450742-CDS-D-mesarthrocarpus_Contig10775:956..10371680789210.5450742-CDS-D-mesarthrocarpus_Contig10775:956..1037Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10775 957..1037 +
1680789210.5546474-CDS-D-mesarthrocarpus_Contig10775:1747..18401680789210.5546474-CDS-D-mesarthrocarpus_Contig10775:1747..1840Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10775 1748..1840 +
1680789210.563838-CDS-D-mesarthrocarpus_Contig10775:2061..21451680789210.563838-CDS-D-mesarthrocarpus_Contig10775:2061..2145Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10775 2062..2145 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10775.1.1prot_D-mesarthrocarpus_Contig10775.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10775 957..2145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10775.1.1

>prot_D-mesarthrocarpus_Contig10775.1.1 ID=prot_D-mesarthrocarpus_Contig10775.1.1|Name=mRNA_D-mesarthrocarpus_Contig10775.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=86bp
MGGAGVEVVGVGRLEAMLGRPLVNLIHMHGEEELKVAREVGTVWSPQVIG
LLTHPTPMPNSSDQAPNAGAGAMALSNQVHGVVEQG
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mRNA from alignment at D-mesarthrocarpus_Contig10775:944..2145+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10775.1.1 ID=mRNA_D-mesarthrocarpus_Contig10775.1.1|Name=mRNA_D-mesarthrocarpus_Contig10775.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1202bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10775:944..2145+ (Discosporangium mesarthrocarpum MT17_79)
AGGGTCTTTGGGGATGGGGGGGGCGGGGGTGGAGGTGGTGGGGGTGGGGA
GGCTTGAGGCGATGCTGGGTCGACCTCTGGTGAATCTGATCCATGTAAGA
GTGGTTTTGTCGGGGACAGGGTCGGGGTCAGGGCCAGGGTTGGGGTTAGG
GTGGGGCCATAGGTGTTGGGTTTGTCATGCTCACTCCTCCTGGTGGATGC
CACACACGATCGCCTCTACTGTTGAACTCCCAAACCCTAACCCTAAGTAC
CCCACTGAAGAAGCAGTGGCCTCCATGAGTTGTGTTGATGTCATCTCACA
CAGCCTTTGTGTCAATCTCAACCTTTATCTTTGGCTTCGAACCTCGAGTC
TCAATCTTTGACCTTCAACCCTAACCCTAACCTTTGACTGTCAACCTCAA
TCTCAAGCTTTGACCTACACCCCTAACCCTAACCCTCTTGTCGAGTGGCA
GGAAACTGTGGCTCAAATTTTGCTTAGATACAAGTATCAACATTGACCCT
AACTGTAACCCTTTCTTGTTTTTTGCTACTTGTTTGTTGTGAAGTGGTGT
TGCATGACTTTTTTTGTAGCTGTAACTGCAGCTGTAGCTGTAGCTGTAAC
TGTAAATGAGCTGATTGCTGTAATGTTGCAAACGGTCTGTGGTCATTGGT
GTATTCTGACAAGGGAGGGTTTTTTGTGGTGTTGCTGTCTGTTGTAGCTG
TAGTAAGTTGCCAATATAGCCGTTTTTGTAGCTGTCTGTTGTAACTGTAG
TAAATTGCCAATATAACCGTTTTTTTGTCTGTTGGTGTGTGTTTGCGACC
ACAGATGCATGGAGAGGAGGAGCTCAAGGTGGCAAGAGAGGTGGGGACCG
TGTGGTCTCCTCAAGTGATAGGGCTCCTGACTCACCCCACTCCCATGGTG
TGTATATCCTGGTGGGGGGGGGGGCGAGGGGCGGGATAGATAAAATGAAG
AATGAGTTGTGTATAGCTCTAGAGCTGTGATGTGTTGATTTTGTGCTGTT
TTCCTGTCCCTAACCCTAACCCCAGGTTCAAAGCTAATCCTATCCTTATC
CCTAACCTTAACCCTAACCCCCCGTCCATTCTCCACTCCTGCCCTGCCCC
TGCCCCCTGAATGTTCAGCCTAATTCCTCAGACCAAGCGCCAAATGCAGG
GGCTGGGGCTATGGCCTTATCCAACCAGGTCCATGGGGTGGTCGAGCAGG
GT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10775:944..2145+

>mRNA_D-mesarthrocarpus_Contig10775.1.1 ID=mRNA_D-mesarthrocarpus_Contig10775.1.1|Name=mRNA_D-mesarthrocarpus_Contig10775.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=258bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10775:944..2145+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGGGGGGCGGGGGTGGAGGTGGTGGGGGTGGGGAGGCTTGAGGCGAT
GCTGGGTCGACCTCTGGTGAATCTGATCCATATGCATGGAGAGGAGGAGC
TCAAGGTGGCAAGAGAGGTGGGGACCGTGTGGTCTCCTCAAGTGATAGGG
CTCCTGACTCACCCCACTCCCATGCCTAATTCCTCAGACCAAGCGCCAAA
TGCAGGGGCTGGGGCTATGGCCTTATCCAACCAGGTCCATGGGGTGGTCG
AGCAGGGT
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