mRNA_D-mesarthrocarpus_Contig10773.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10773.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10773.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.160e-65
Identity = 133/270 (49.26%), Postives = 181/270 (67.04%), Query Frame = 2
Query:  779 RLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            +++ +  RLP++KLKILVVVWQILS FPSI+AV FPP YA+FLS I++++ DLG ++SASC+F  +DFY  LL+ TL PL + M++V  Y + K+R      +  S  R RAA+SRH A GLLL+FLVF + ST+ FKTF+CD  A   K YLR DYSI C T +++ Y+ YA +M++VYPVGIPLLY +ILW+NR  LNP++ +     G  VNP     T R   K              + +L+ K+  R+++PDL PS+FLWKDFG
Sbjct: 1098 KIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAG--AGSAGSLMR-RAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKT-----GAVVNPRADGSTDRITYK------------ANSEDLEEKLEKRRRNPDLIPSMFLWKDFG 1347          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 8.610e-64
Identity = 132/279 (47.31%), Postives = 178/279 (63.80%), Query Frame = 2
Query:  767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEIL-----YNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            GL  R++ +V  LP++KLKILVVVWQIL+ FPSI+ V FPP Y++FLS I+++NLD+G + +ASC+   V FY RLL+ TLTP+ L  ++V  + M K+R         S    +AA+SRH A GLLLTFLVF+S ST+ FKTF CD  A   + YLR DYS+SC T ++  YR YA IM++VYP+GIPLLY +ILW NR  LNP++ S                        PQPT   ++++      Y   LQ ++  R+++PDL PS+FLWKDFG
Sbjct:  780 GLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKERAGIGS---ASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAI---------------------PQPTGAVEKKVSLVPANYGDGLQERLDQRRRNPDLVPSMFLWKDFG 1034          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.510e-63
Identity = 131/279 (46.95%), Postives = 177/279 (63.44%), Query Frame = 2
Query:  767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEIL-----YNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            GL  R++ +V  LP++KLKILVVVWQIL+ FPSI+ V FPP Y++FLS ++++NLD+G + +ASC+   V FY RLL+ TLTP+ L  ++V  + M K+R         S    RAA+SRH A GLLLTFLVF+S ST+ FKTF CD  A   + YLR DYS+SC T ++  +R YA IM+LVYP+GIPLLY +ILW NR  LNP++ S                        PQPT   + ++      Y  +L+ ++  R+ +PDL PS+FLWKDFG
Sbjct: 1122 GLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQRAGIGS---ASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEAT---------------------PQPTGGVEMDVALVPANYGDDLEERLEQRRNNPDLVPSMFLWKDFG 1376          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 231 bits (589), Expect = 2.620e-62
Identity = 132/290 (45.52%), Postives = 180/290 (62.07%), Query Frame = 2
Query:  767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKL------DSTIHTPGHTVNPNPSHWT-----------GRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDF 1585
            G+  +++ +  RLP++KLKILVVVWQIL+ FPSI+   FPP YA+FLS I+ INLD+GSI S +C+   V FY RLLV T+TP+ L  +++  Y M K R         S    +AA+SRH A GLLLTFLVF+S STV+FKTF+CD  A   + YLR DYS+SC+T  +  Y+ YA +M++VYP+GIPLLY +ILW NR  LNP+       D    T     + + S W+           G +  K+     TP+E       L+ ++  R+++PDL PS+FLWKDF
Sbjct:  606 GIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKSRAGIGS---ASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPRPRPKATDDDVDETTVPAQDADASGWSVASRKAGGXXXGEYVSKE-----TPEE-------LEERLQKRRQNPDLVPSMFLWKDF 880          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 5.570e-62
Identity = 128/276 (46.38%), Postives = 171/276 (61.96%), Query Frame = 2
Query:  767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNP--SHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            G+  +++ +  RLP++KLKILVVVWQIL+ FP+I+   FPP YA+FLS I+ INLD+GSI S +C+   V FY RLLV T+TP+ L  +++  Y M K R         S    +AA+SRH A GLLLTFLVF+S STV+FKTF+CD  A     YLR DYS+SC+T  +  Y+ YA IM++VYP+GIPLLY +ILW NR  LNP+                  S W+   R+                 EL+ ++  R+++PDL PS+FLWKDFG
Sbjct: 1111 GIGEKIKRWAARLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKGRAGIGS---ASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDQAVEGDSYLRADYSLSCNTDTHTWYKVYAGIMIVVYPIGIPLLYAFILWINRDSLNPRXXXXXXXXXXXXXXXXXXSGWSVASRKAXXXXXXXEHVSKETPEELEERLQKRRQNPDLVPSMFLWKDFG 1383          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 7.300e-60
Identity = 127/274 (46.35%), Postives = 173/274 (63.14%), Query Frame = 2
Query:  767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            GL  +++ +  R+PL+KLKILVVVWQIL+ FPSI+ V +PP Y++FLS I+++N D+G I SASC    + FY+RLL+ TL P+ L  ++V  Y M K   R            RAA+SRH A GLLLTFLVF+S ST++FKTF+CD  A   + +LR DY ISC T ++  Y  YA +M+ VYP+GIPLLY +ILWRNR  LNP+     ++ G  ++   S          P+ T           ELQ ++  R+++PDL PS+FLWKDFG
Sbjct: 1177 GLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAK---RTAGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPR---AYYSTGLELDGEMSEG--------PRET---------EEELQDRLEKRRQNPDLVPSMFLWKDFG 1427          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.080e-47
Identity = 114/270 (42.22%), Postives = 157/270 (58.15%), Query Frame = 2
Query:  779 RLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
            +++ +  RLP++K+KILVVVWQILS FPSI+AV FPP YA+FLS IN+++ DL  ++SASC+F  +DFY RLLV TL PL + M++V  Y M K+R     +        RAA+SRH A GLLL+FLVF + ST+ FKTF+CD  A   + YL  DY I C T ++  Y+ YA IM+L                    LNP  +++            S    R   K  +P          + +L+ K+  R+++PDL PS+FLWKDFG
Sbjct: 1105 KIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRA---GSGSAGALGRRAAWSRHVAAGLLLSFLVFIATSTMAFKTFACDDEAVEGESYLGADYGIQCHTDKHTWYKVYAGIMIL-------------------SLNPPAEASTLVD--------SSADERKTNKAYKPK-------FMSEDLEEKLEKRRRNPDLVPSMFLWKDFG 1337          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.750e-42
Identity = 90/196 (45.92%), Postives = 133/196 (67.86%), Query Frame = 2
Query:  803 LPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLM---VKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNP 1381
            +P  KLKILVVVWQIL++F  ++ +P+PP Y +FL+ ++I N D+   ++A+C+   + FY RL+ VTL PLAL+  +   Y++   V +R  Y  +   +  R RA   RHA+  LL+ FLVFSSVST +F TFSCD + D +   LR DYSISCD  ++  Y+AYA++M+L+YP+G+P+L+  +L + R KLNP
Sbjct: 1210 VPFQKLKILVVVWQILTQFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVV-RHASAALLILFLVFSSVSTTVFSTFSCDYVEDLDVSLLRADYSISCDHPDHTFYKAYAALMILLYPIGVPMLFAVLLLKRRDKLNP 1404          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 2.000e-41
Identity = 88/191 (46.07%), Postives = 131/191 (68.59%), Query Frame = 2
Query:  803 LPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKL 1375
            +PL   KI++VVWQIL++F + + V +P VY  FLSAI++IN+DLGS++SA C++ G+DF+DRLLV T+ PL  + ++ S YL+  +R     N       +     +H  V L +TFLV+SSVS+++F+TF+CD++ D N  YLR DY I C T ++   + YA +MV+VYPVGIPLLY  +L+++R  L
Sbjct:  693 IPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRR-----NATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNN-YLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDIL 877          
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.580e-41
Identity = 105/331 (31.72%), Postives = 163/331 (49.24%), Query Frame = 2
Query:  776 SRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLA-LMMLIVSMYL--------------------------------------------------------MVKKRLRYR--ENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTI--HTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDF 1585
            +R+   +  LPL+KLKI++VVWQI S F  I+  PFPP+Y KFLS I I + DLG I+SA+C+  G+DFYD+LL+VT+ PL  L  L ++ ++                                                         V+  LR +  +   P  ERL   F+RH  + L++ +LV++ +STV+F+TF+C+ + +  KRYLR D+ I CDT+ +  Y+AYA +M+ +YP+GIP ++ + L R RS++NP  D  +     G  V                               ++ K++ R KD  +AP+ FLW  +
Sbjct: 1250 TRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHV-------------------------------VERKMTVRDKDQSIAPTSFLWNAY 1549          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRH4_ECTSI1.160e-6549.26Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH1_ECTSI8.610e-6447.31Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JS31_9PHAE1.510e-6346.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK8_9PHAE2.620e-6245.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI5.570e-6246.38Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH0_ECTSI7.300e-6046.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRH3_ECTSI1.080e-4742.22Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JUJ2_9PHAE1.750e-4245.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI2.000e-4146.07Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5K4A5_9PHAE2.580e-4131.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10773contigD-mesarthrocarpus_Contig10773:101..3733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FTT9
PFAMsBeta_helix,Chlam_PMP
Model size1588
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.46e-41
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size945
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10773.1.2prot_D-mesarthrocarpus_Contig10773.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10773 101..3090 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.2935321-CDS-D-mesarthrocarpus_Contig10773:100..3761680789210.2935321-CDS-D-mesarthrocarpus_Contig10773:100..376Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10773 101..376 -
1680789210.3064148-CDS-D-mesarthrocarpus_Contig10773:647..8001680789210.3064148-CDS-D-mesarthrocarpus_Contig10773:647..800Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10773 648..800 -
1680789210.317769-CDS-D-mesarthrocarpus_Contig10773:1577..18801680789210.317769-CDS-D-mesarthrocarpus_Contig10773:1577..1880Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10773 1578..1880 -
1680789210.3353162-CDS-D-mesarthrocarpus_Contig10773:2592..26151680789210.3353162-CDS-D-mesarthrocarpus_Contig10773:2592..2615Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10773 2593..2615 -
1680789210.3501837-CDS-D-mesarthrocarpus_Contig10773:2900..30901680789210.3501837-CDS-D-mesarthrocarpus_Contig10773:2900..3090Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10773 2901..3090 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789210.36325-UTR-D-mesarthrocarpus_Contig10773:3090..37331680789210.36325-UTR-D-mesarthrocarpus_Contig10773:3090..3733Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10773 3091..3733 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10773.1.2

>prot_D-mesarthrocarpus_Contig10773.1.2 ID=prot_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=315bp
MSQKQSPSQHYMCGSNDMGGEESDSVVTESDKRDSDGRRRVGLLSRLRAY
VFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGS
IVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPP
SPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLRE
DYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDS
TIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKK
DPDLAPSLFLWKDFG
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mRNA from alignment at D-mesarthrocarpus_Contig10773:101..3733-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10773.1.2 ID=mRNA_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3633bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10773:101..3733- (Discosporangium mesarthrocarpum MT17_79)
ATTGCGCCGTCTGTGATGCTGGCTACAGCATGTCATCAGGTCGGACATGC AACAAATGTGATGGAAACATAACCACCTTCCTCTTGGTCCTCACCGTCCT TTTCTTTTTGAGCTGTCTCCTCCTCTTTGCTGTGGTTGCGGTCTTCCTTG TTGGAGGGCTGGAGGCTGTCCAGATGATCCAAAGGGCAGTTTCTAGTAAA CACCTCTCTTCATCTTCTAGATCCTCCAAGCGAGGACAAGGATCAGGGAA GAGGGTCTGGCCGGTTTCACAAGTTAGTCGGAACTTCATGGGCACATCTG CAACCCCCCAGAGAAACAACTATGGCAACGCTGTACCTGCTGATACACCC AGTGCCATAACTGCTGGGATTTATTCCATCAGCTCTAGCTGGCCCAGAAA AAGTGTCAGCTTTCATTACAAGCAACAAGGGGTAGGGGGGCATGAGAGGT CTGTGGGGTATGTGGAGGAAGACAGCAAAGATGGGGACTCTTGTGAGTCA ATGCAGGGTCACAGGTTTGGTCCTGTTCAATGTGACAGGGGAGGGAATGA TGATCCACTGAGGACAAATTCAAGCTCGTTGGCAGCAGTGGAGGGGCTCG GTCATTTGCACAGCGAAAGAATACAGATGATTGGCAGCAGAGTATGTCAC AGAAGCAGAGCCCGTCACAGCATTACATGTGTGGTTCCAATGACATGGGA GGGGAGGAAAGTGATTCTGTGGTTACAGAGAGTGATAAAAGAGACAGTGA TGGGAGGAGGAGGGTGGGGCTACTGTCGAGGCTGAGGGCCTACGTGTTCC GACTTCCGCTAAACAAACTCAAGATCCTTGTCGGTGAGCTTTGAGGGGGA AAGTGTTGCGGTAGAGTAGCATCGGTGCACAACACTGTGAAGACATTTTT GTGTTGGGCATAAACTGGGCAGGGTGGAATATTTTCGCTCCAGATTACAT TGTCTGGCAGGCGTTTTTTTTAATTAACTATTTGGTGTATCCAGCTTGAA ACCTGGAGCTTCTGGTAATTTGAACCATGCAGTGACTTCCTCAATTTCAT ACACTCATGCCATGTTCCTCCTCACTCTCTGTGTTGCTTGGCCTGTGCTG GGAATCCATGGTCTCCAGTGGTCTGGCAAATCCTGTCGGAGGTGAGATGT TAAAGTTTTGCCTTAGCTGCACTTTTTTTTGGTTAGGGTTATGATTGTGG TTCGTGGTCTGACAGACCCGCTTTGAGTTGCCAAGTTTACTCCTGCACTG AAGGTGAAGTTTTTGCTGAAGTCGTTTCACTTCTTCACATATAAACTCCC CAATGCAGTGTGAATAGATTTGTTAAAGAATTTTACGCCTGTAGCTGACA ATGCAATCTATGCCAACCCAACATAAAATGTACAGAAGTAATTTGAAGAT CAGATTTTTCTATGAGCTCTGTGACATAGCATGCAGAGCTCGAGTCTCTG CGTGTTCTCACTGTGCTTTGAATTGCGTTTCTGTCAAGTATATGTACTGC CACAGTTGAAGTGCATCACAGTACAGCTATACATTTCTCCTTCTTTTCCC TTTGTCCTTTTTCAATGGAAGTAGAGCTATAGAGTAAGGGTGCATAATGT GTCACATCGATGTTGCTGAGAGGTTTTGAGCTGTATAGCCAAGGCAAAAT CATGCCTTTGTACCAACGATGGGGTTAGGATGGACTCCGCCATGTACAGT GCATAATCCTCAGTGAAACCTTGCTTAATATTAACCCTGTTTCTGTTACC TGTGCTTCCTTTTTCTTTTCCCCAATTGCGCTATCTGCAACTTGGACTGG ATGGCTGACATCCGATTGCTGGTCGCTGGTCTCTTCATGTCTGGTGGTCA CAGTTCCCGTCAATCAGTGCTGTTCCCTTCCCTCCGGTCTATGCTAAGTT TCTATCAGCCATCAACATCATCAACCTCGACCTTGGCTCCATTGTGTCTG CCTCATGCATGTTCCGGGGTGTGGACTTCTATGACAGACTGCTTGTGGTG ACCCTCACCCCTCTAGCACTCATGATGCTCATAGTCAGCATGTACCTCAT GGTGAAGAAAAGGTTGAGATACAGGGAAAACACCCCCCCATCCCCAGAGA GGCTACGGGCAGCCTTCTCCAGGCATGCCGCTGTTGGCCTGCTCCTCACT TTCCTGGTGAGTTAACTAACACTGCTTACAGTGGGAATATTTTTTTTCTC TTTTTGAGCCTGCCCTAACCCTAACCCTTGTTCTACCTTCGGAGTGTGGC AGAGGACATTGGCTCTGTGGTGTACCGGTGCAGTGTTTTAGAGGGAAGAA AGCACCCTAAAGTACTTTGTTTTACCCCAGTGCCTGCCAAGGGGTTCGAG GAGAGGCCTACAAAATTTATGAGGGTGAATCCGCAGGAATTGGGCTGGGC TACCTACAGGGCTACTTTTAGGGTGATAGTCCCGTTTGAGATGCAACTCT CAACATTAACCTTGGGCATTGCAGGTTAGCTACCCTGTGGGATATTTTCT GTGCAGGTTCATCTGGCATTGTCATAATCCATGCAGTGACAGGGTTATGG TCATGCTTTAAAGTAGCTTAGAATCCCTAACCCTGTAACCCTCTTGGTCA AGACATGACATCAGTAACTGATTGGTTGATGCTGCGTGCAAATAATAGTC ATTAACCCTTTCCCCATTTAGCTCTAGCATGAGTCACACGCTTATACTTG ACACTCCTTCCCCCTCCCATTCTCTTACGCTGTTTTTGCTTTTTGCTCTC ATTGAGAGATATAGTGTTGAGTGTAAATATTAGTACTACTGTCTTATCCT GACTGACTTATTCACTGCTTATGTTGTGGTATTTTACTTCAATACTACGT ATCATGTGTTTTAGCCTGTTCAGTTCTGAAACTAATCCTTAGTCTGCCTG TCTCCCTCTCCAAATGGATGAACGCATGGACAGGTGTTCAGCTCTGTATC AACTGTAATATTCAAGACTTTCTCCTGTGACACCATTGCTGACACTAACA AGCGATATCTGCGGGAGGACTACAGCATCAGTTGTGACACTAAAGAGTAC CAGGGGTACAGGGCATATGCATCAATCATGGTCTTGGTGAGGTGTAGGGT GACCCACGTCTGTTGCTTTGTTGGAGCTGCCAGGGAACCCTTAATTAAAC AGAATCGCATCTGCCTCGGGGACTCCCCTTCTTGACATTGCTGACATTCC AGCGCCCTTAGCAAGGGACACGATATCAGCCCCAAAGCCAGGGGTTGGAG CTGACCACTCAGCAAGTCCCATATTCTGATTGTAGAGTACACAAATATAT ATATTTGACACTGCAAATGCACCACATGGACCCTGGACTGTGTCTTTCCC TTGCCAGGTGTACCCCGTGGGGATACCCCTACTCTACTTCTGGATATTAT GGAGAAACAGGAGCAAACTCAATCCCAAGCTGGATAGTACCATCCACACT CCCGGCCATACCGTTAACCCCAACCCTAGTCACTGGACTGGTCGCTGGAG AAGGAAGCAACCGCAACCCACAATGACACCACAAGAAGAGATCCTGTACA ACAGAGAGTTGCAGGCGAAAGTCAGTTCGAGGAAGAAGGATCCAGACCTC GCACCAAGCCTTTTCCTCTGGAAGGATTTTGGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10773:101..3733-

>mRNA_D-mesarthrocarpus_Contig10773.1.2 ID=mRNA_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=945bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10773:101..3733- (Discosporangium mesarthrocarpum MT17_79)
ATGTCACAGAAGCAGAGCCCGTCACAGCATTACATGTGTGGTTCCAATGA
CATGGGAGGGGAGGAAAGTGATTCTGTGGTTACAGAGAGTGATAAAAGAG
ACAGTGATGGGAGGAGGAGGGTGGGGCTACTGTCGAGGCTGAGGGCCTAC
GTGTTCCGACTTCCGCTAAACAAACTCAAGATCCTTGTCGTGGTCTGGCA
AATCCTGTCGGAGTTCCCGTCAATCAGTGCTGTTCCCTTCCCTCCGGTCT
ATGCTAAGTTTCTATCAGCCATCAACATCATCAACCTCGACCTTGGCTCC
ATTGTGTCTGCCTCATGCATGTTCCGGGGTGTGGACTTCTATGACAGACT
GCTTGTGGTGACCCTCACCCCTCTAGCACTCATGATGCTCATAGTCAGCA
TGTACCTCATGGTGAAGAAAAGGTTGAGATACAGGGAAAACACCCCCCCA
TCCCCAGAGAGGCTACGGGCAGCCTTCTCCAGGCATGCCGCTGTTGGCCT
GCTCCTCACTTTCCTGGTGTTCAGCTCTGTATCAACTGTAATATTCAAGA
CTTTCTCCTGTGACACCATTGCTGACACTAACAAGCGATATCTGCGGGAG
GACTACAGCATCAGTTGTGACACTAAAGAGTACCAGGGGTACAGGGCATA
TGCATCAATCATGGTCTTGGTGTACCCCGTGGGGATACCCCTACTCTACT
TCTGGATATTATGGAGAAACAGGAGCAAACTCAATCCCAAGCTGGATAGT
ACCATCCACACTCCCGGCCATACCGTTAACCCCAACCCTAGTCACTGGAC
TGGTCGCTGGAGAAGGAAGCAACCGCAACCCACAATGACACCACAAGAAG
AGATCCTGTACAACAGAGAGTTGCAGGCGAAAGTCAGTTCGAGGAAGAAG
GATCCAGACCTCGCACCAAGCCTTTTCCTCTGGAAGGATTTTGGT
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