mRNA_D-mesarthrocarpus_Contig10773.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 241 bits (616), Expect = 1.160e-65 Identity = 133/270 (49.26%), Postives = 181/270 (67.04%), Query Frame = 2
Query: 779 RLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
+++ + RLP++KLKILVVVWQILS FPSI+AV FPP YA+FLS I++++ DLG ++SASC+F +DFY LL+ TL PL + M++V Y + K+R + S R RAA+SRH A GLLL+FLVF + ST+ FKTF+CD A K YLR DYSI C T +++ Y+ YA +M++VYPVGIPLLY +ILW+NR LNP++ + G VNP T R K + +L+ K+ R+++PDL PS+FLWKDFG
Sbjct: 1098 KIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAG--AGSAGSLMR-RAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKT-----GAVVNPRADGSTDRITYK------------ANSEDLEEKLEKRRRNPDLIPSMFLWKDFG 1347
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 236 bits (601), Expect = 8.610e-64 Identity = 132/279 (47.31%), Postives = 178/279 (63.80%), Query Frame = 2
Query: 767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEIL-----YNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
GL R++ +V LP++KLKILVVVWQIL+ FPSI+ V FPP Y++FLS I+++NLD+G + +ASC+ V FY RLL+ TLTP+ L ++V + M K+R S +AA+SRH A GLLLTFLVF+S ST+ FKTF CD A + YLR DYS+SC T ++ YR YA IM++VYP+GIPLLY +ILW NR LNP++ S PQPT ++++ Y LQ ++ R+++PDL PS+FLWKDFG
Sbjct: 780 GLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKERAGIGS---ASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAI---------------------PQPTGAVEKKVSLVPANYGDGLQERLDQRRRNPDLVPSMFLWKDFG 1034
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 235 bits (600), Expect = 1.510e-63 Identity = 131/279 (46.95%), Postives = 177/279 (63.44%), Query Frame = 2
Query: 767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEIL-----YNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
GL R++ +V LP++KLKILVVVWQIL+ FPSI+ V FPP Y++FLS ++++NLD+G + +ASC+ V FY RLL+ TLTP+ L ++V + M K+R S RAA+SRH A GLLLTFLVF+S ST+ FKTF CD A + YLR DYS+SC T ++ +R YA IM+LVYP+GIPLLY +ILW NR LNP++ S PQPT + ++ Y +L+ ++ R+ +PDL PS+FLWKDFG
Sbjct: 1122 GLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQRAGIGS---ASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEAT---------------------PQPTGGVEMDVALVPANYGDDLEERLEQRRNNPDLVPSMFLWKDFG 1376
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 231 bits (589), Expect = 2.620e-62 Identity = 132/290 (45.52%), Postives = 180/290 (62.07%), Query Frame = 2
Query: 767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKL------DSTIHTPGHTVNPNPSHWT-----------GRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDF 1585
G+ +++ + RLP++KLKILVVVWQIL+ FPSI+ FPP YA+FLS I+ INLD+GSI S +C+ V FY RLLV T+TP+ L +++ Y M K R S +AA+SRH A GLLLTFLVF+S STV+FKTF+CD A + YLR DYS+SC+T + Y+ YA +M++VYP+GIPLLY +ILW NR LNP+ D T + + S W+ G + K+ TP+E L+ ++ R+++PDL PS+FLWKDF
Sbjct: 606 GIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKSRAGIGS---ASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPRPRPKATDDDVDETTVPAQDADASGWSVASRKAGGXXXGEYVSKE-----TPEE-------LEERLQKRRQNPDLVPSMFLWKDF 880
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI) HSP 1 Score: 231 bits (588), Expect = 5.570e-62 Identity = 128/276 (46.38%), Postives = 171/276 (61.96%), Query Frame = 2
Query: 767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNP--SHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
G+ +++ + RLP++KLKILVVVWQIL+ FP+I+ FPP YA+FLS I+ INLD+GSI S +C+ V FY RLLV T+TP+ L +++ Y M K R S +AA+SRH A GLLLTFLVF+S STV+FKTF+CD A YLR DYS+SC+T + Y+ YA IM++VYP+GIPLLY +ILW NR LNP+ S W+ R+ EL+ ++ R+++PDL PS+FLWKDFG
Sbjct: 1111 GIGEKIKRWAARLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKGRAGIGS---ASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDQAVEGDSYLRADYSLSCNTDTHTWYKVYAGIMIVVYPIGIPLLYAFILWINRDSLNPRXXXXXXXXXXXXXXXXXXSGWSVASRKAXXXXXXXEHVSKETPEELEERLQKRRQNPDLVPSMFLWKDFG 1383
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 224 bits (572), Expect = 7.300e-60 Identity = 127/274 (46.35%), Postives = 173/274 (63.14%), Query Frame = 2
Query: 767 GLLSRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
GL +++ + R+PL+KLKILVVVWQIL+ FPSI+ V +PP Y++FLS I+++N D+G I SASC + FY+RLL+ TL P+ L ++V Y M K R RAA+SRH A GLLLTFLVF+S ST++FKTF+CD A + +LR DY ISC T ++ Y YA +M+ VYP+GIPLLY +ILWRNR LNP+ ++ G ++ S P+ T ELQ ++ R+++PDL PS+FLWKDFG
Sbjct: 1177 GLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAK---RTAGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPR---AYYSTGLELDGEMSEG--------PRET---------EEELQDRLEKRRQNPDLVPSMFLWKDFG 1427
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 189 bits (479), Expect = 1.080e-47 Identity = 114/270 (42.22%), Postives = 157/270 (58.15%), Query Frame = 2
Query: 779 RLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTIHTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDFG 1588
+++ + RLP++K+KILVVVWQILS FPSI+AV FPP YA+FLS IN+++ DL ++SASC+F +DFY RLLV TL PL + M++V Y M K+R + RAA+SRH A GLLL+FLVF + ST+ FKTF+CD A + YL DY I C T ++ Y+ YA IM+L LNP +++ S R K +P + +L+ K+ R+++PDL PS+FLWKDFG
Sbjct: 1105 KIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRA---GSGSAGALGRRAAWSRHVAAGLLLSFLVFIATSTMAFKTFACDDEAVEGESYLGADYGIQCHTDKHTWYKVYAGIMIL-------------------SLNPPAEASTLVD--------SSADERKTNKAYKPK-------FMSEDLEEKLEKRRRNPDLVPSMFLWKDFG 1337
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.750e-42 Identity = 90/196 (45.92%), Postives = 133/196 (67.86%), Query Frame = 2
Query: 803 LPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLM---VKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNP 1381
+P KLKILVVVWQIL++F ++ +P+PP Y +FL+ ++I N D+ ++A+C+ + FY RL+ VTL PLAL+ + Y++ V +R Y + + R RA RHA+ LL+ FLVFSSVST +F TFSCD + D + LR DYSISCD ++ Y+AYA++M+L+YP+G+P+L+ +L + R KLNP
Sbjct: 1210 VPFQKLKILVVVWQILTQFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVV-RHASAALLILFLVFSSVSTTVFSTFSCDYVEDLDVSLLRADYSISCDHPDHTFYKAYAALMILLYPIGVPMLFAVLLLKRRDKLNP 1404
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.000e-41 Identity = 88/191 (46.07%), Postives = 131/191 (68.59%), Query Frame = 2
Query: 803 LPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLALMMLIVSMYLMVKKRLRYRENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKL 1375
+PL KI++VVWQIL++F + + V +P VY FLSAI++IN+DLGS++SA C++ G+DF+DRLLV T+ PL + ++ S YL+ +R N + +H V L +TFLV+SSVS+++F+TF+CD++ D N YLR DY I C T ++ + YA +MV+VYPVGIPLLY +L+++R L
Sbjct: 693 IPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRR-----NATAGHAIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNN-YLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDIL 877
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.580e-41 Identity = 105/331 (31.72%), Postives = 163/331 (49.24%), Query Frame = 2
Query: 776 SRLRAYVFRLPLNKLKILVVVWQILSEFPSISAVPFPPVYAKFLSAINIINLDLGSIVSASCMFRGVDFYDRLLVVTLTPLA-LMMLIVSMYL--------------------------------------------------------MVKKRLRYR--ENTPPSPERLRAAFSRHAAVGLLLTFLVFSSVSTVIFKTFSCDTIADTNKRYLREDYSISCDTKEYQGYRAYASIMVLVYPVGIPLLYFWILWRNRSKLNPKLDSTI--HTPGHTVNPNPSHWTGRWRRKQPQPTMTPQEEILYNRELQAKVSSRKKDPDLAPSLFLWKDF 1585
+R+ + LPL+KLKI++VVWQI S F I+ PFPP+Y KFLS I I + DLG I+SA+C+ G+DFYD+LL+VT+ PL L L ++ ++ V+ LR + + P ERL F+RH + L++ +LV++ +STV+F+TF+C+ + + KRYLR D+ I CDT+ + Y+AYA +M+ +YP+GIP ++ + L R RS++NP D + G V ++ K++ R KD +AP+ FLW +
Sbjct: 1250 TRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHV-------------------------------VERKMTVRDKDQSIAPTSFLWNAY 1549 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10773.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10773.1.2 >prot_D-mesarthrocarpus_Contig10773.1.2 ID=prot_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=315bp MSQKQSPSQHYMCGSNDMGGEESDSVVTESDKRDSDGRRRVGLLSRLRAYback to top mRNA from alignment at D-mesarthrocarpus_Contig10773:101..3733- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10773.1.2 ID=mRNA_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3633bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10773:101..3733- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10773:101..3733- >mRNA_D-mesarthrocarpus_Contig10773.1.2 ID=mRNA_D-mesarthrocarpus_Contig10773.1.2|Name=mRNA_D-mesarthrocarpus_Contig10773.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=945bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10773:101..3733- (Discosporangium mesarthrocarpum MT17_79)back to top |