mRNA_D-mesarthrocarpus_Contig1076.8.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1076.8.1
Unique NamemRNA_D-mesarthrocarpus_Contig1076.8.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1076.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1076contigD-mesarthrocarpus_Contig1076:14517..16338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size384
Hectar predicted targeting categoryother localisation
Exons2
Cds size384
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789209.1638985-CDS-D-mesarthrocarpus_Contig1076:14516..146451680789209.1638985-CDS-D-mesarthrocarpus_Contig1076:14516..14645Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1076 14517..14645 +
1680789209.1775296-CDS-D-mesarthrocarpus_Contig1076:16083..163381680789209.1775296-CDS-D-mesarthrocarpus_Contig1076:16083..16338Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1076 16084..16338 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1076.8.1prot_D-mesarthrocarpus_Contig1076.8.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1076 14517..16338 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1076.8.1

>prot_D-mesarthrocarpus_Contig1076.8.1 ID=prot_D-mesarthrocarpus_Contig1076.8.1|Name=mRNA_D-mesarthrocarpus_Contig1076.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=128bp
KPLYNVFGYVEQGPAPACDTGDLGRDIRCGGGVGGSGAGGRWEHLEEIDA
ESCNTVSSSSPPPPPPQSWEEEKEGKGVRVRVRCRGAGEGRDSKSRIKRP
VSPTASDGAPTAAPEPVMASGSRGDCQG
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mRNA from alignment at D-mesarthrocarpus_Contig1076:14517..16338+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1076.8.1 ID=mRNA_D-mesarthrocarpus_Contig1076.8.1|Name=mRNA_D-mesarthrocarpus_Contig1076.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1822bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1076:14517..16338+ (Discosporangium mesarthrocarpum MT17_79)
AAGCCCCTGTACAACGTCTTCGGGTATGTCGAGCAGGGCCCGGCACCTGC
CTGTGACACTGGGGATCTGGGCAGGGATATTCGCTGTGGGGGCGGGGTTG
GTGGCTCTGGAGCAGGGGGCAGGTGGGAGGTGAGGACTGAGAACCACTGG
TGTGATGCGTGGCACCTGTCTTGATGTCGTTGACCTGATTTACCGTGACA
CACTACCGTACCGTATTGTGAGCTGTACGGTGCGGCATTCTGCCCTGTCC
TGTCCTATCCTACCCTGTCCTGTCCTGCCATCTGTACAGTATGCTTAAGA
GCCCCTGCGCCTCAAACTGTGCTTCAAACCGTGGCGGCAAGTGGTGGCTT
TTTAAGCGTGCGAGCGCATGCAATGCCCTCTTGTGCTTTTTTTTTTTTTT
GGGATCTTTTCCATTCGCTTTGTCGCGGCCAACATAAGAAAAAATTGCCT
GGACGCGTGCCGGGACTTGGGGTTGGCATGCTGCCAAAGCGAATGCGGTC
CAGGCCTCTCCCCTGCAGTAGTGTGCTGAGGTGGGTAGGTGCAACACGCA
CCTAGAGCCTTTGCCGCCGATTCTGGAGCAGCCTCAGGGACTGCGGGAGG
TAGGGTCGCTGCTTGCTGAGCACTGATGAGCTGTTCTCATGTTTTGTGTT
TCACTCTGCAAGGATGGATAGGGGGGTTTCCATGATTCATATCAGTATTG
CAGCCTTACCCTGTCCTTAGTCAACCCTGATCATTCACACTTATGGGCAA
TGACCAGAAAGGGGTGTTAACCTATCTGAAATGGGCATTTAGGGGCATAT
GCTCAATTTGATAGGGCATAATGTGTAGAGGGCGCCACCCAGGGACCAAA
TACCCCCCAGTTGCCGCATCATGTGGGAGTATACTCCTGCATCCCTACCC
CTTAAACTATATCCCATTCTTGTCAATTCTGGGTGTCGGCTGTAACCCCT
GGTTGACCACTCTGATGGAGGTGAACACACTTATATATTGGGTACGTCCA
TTCTGATATGTCAGCCTCTTTTTTTTTTAATGAGAGGCCATTGCTTCCTC
CCCATGAGACTTCTTCCTCAAAATAAACCAAAAAATCATCAAAGGGGGAG
GCAAGCGGTGCCCAGCCTCTGCAGCTGGTTGTGTTGATGACGGAGACGGA
TACAAGGTAGAAGTCCACATATTGCCCTGTATTAGGTCCAGAGGCTGGAC
AACCCTGCCTCCCTTTTTACTGCCAAAACCCAGTGGTACTTCATACTAAA
AAAAAAAAGCTGACGTGTTTCACTGCACACTCAACCAAACCTTGGGAGAG
TCCCTCAGGCTTGGCCGACCCCAGAACACAGACCATGTCACCATCTGACT
GATGCCCCTGAAATGGCCTTGTGGATAGGGGTATACCCCTTTCTGTCTGT
TGCCCCCTACATACTTGCCGGATGGTTGGTTTAAACAATGAGACACCTGC
CCTCTCAGTTAGTCCATCAGAAGCCACCCCCAAGAAAACAGCAAATAGAT
ACCGGCACCCCACCCTGATGAATTCCTGGAACCCCCCCCCCCCAAACCCT
CTCGAACAAAACCTCAGCACCTGGAGGAAATTGATGCAGAGAGTTGCAAC
ACTGTTTCCTCCTCCTCACCACCGCCACCACCACCCCAGTCTTGGGAAGA
AGAAAAAGAAGGCAAAGGGGTCAGGGTTAGGGTTAGGTGTAGAGGGGCGG
GGGAGGGGAGAGACAGCAAGAGTAGGATTAAGAGACCTGTCTCTCCCACT
GCCAGTGATGGTGCCCCCACGGCAGCCCCTGAGCCTGTGATGGCCTCCGG
GAGCAGGGGGGACTGCCAAGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1076:14517..16338+

>mRNA_D-mesarthrocarpus_Contig1076.8.1 ID=mRNA_D-mesarthrocarpus_Contig1076.8.1|Name=mRNA_D-mesarthrocarpus_Contig1076.8.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=384bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1076:14517..16338+ (Discosporangium mesarthrocarpum MT17_79)
AAGCCCCTGTACAACGTCTTCGGGTATGTCGAGCAGGGCCCGGCACCTGC
CTGTGACACTGGGGATCTGGGCAGGGATATTCGCTGTGGGGGCGGGGTTG
GTGGCTCTGGAGCAGGGGGCAGGTGGGAGCACCTGGAGGAAATTGATGCA
GAGAGTTGCAACACTGTTTCCTCCTCCTCACCACCGCCACCACCACCCCA
GTCTTGGGAAGAAGAAAAAGAAGGCAAAGGGGTCAGGGTTAGGGTTAGGT
GTAGAGGGGCGGGGGAGGGGAGAGACAGCAAGAGTAGGATTAAGAGACCT
GTCTCTCCCACTGCCAGTGATGGTGCCCCCACGGCAGCCCCTGAGCCTGT
GATGGCCTCCGGGAGCAGGGGGGACTGCCAAGGG
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