mRNA_D-mesarthrocarpus_Contig1076.10.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1076.10.1
Unique NamemRNA_D-mesarthrocarpus_Contig1076.10.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1076.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1076contigD-mesarthrocarpus_Contig1076:20621..21378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size760
Hectar predicted targeting categoryother localisation
Exons1
Cds size756
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789209.3277364-CDS-D-mesarthrocarpus_Contig1076:20620..213761680789209.3277364-CDS-D-mesarthrocarpus_Contig1076:20620..21376Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1076 20621..21376 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1076.10.1prot_D-mesarthrocarpus_Contig1076.10.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1076 20621..21376 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1076.10.1

>prot_D-mesarthrocarpus_Contig1076.10.1 ID=prot_D-mesarthrocarpus_Contig1076.10.1|Name=mRNA_D-mesarthrocarpus_Contig1076.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=252bp
LWLGDCTAWIQVLITSSPVSKGAGAGGTGVCGGVDVVDIWDANHVPVVAA
GEMAHGTAPSRGKSPDSQQEVPPPSPHCFKDGVVGAGPGPWGHSQAGVCR
ATAARGGRLAMVRRFSILTEIVARQVEGVGTATGAEAGAMVDRGLTNRGE
AEGGCPGTGLGESRGGLQDCGSTEAFETFEVGGAKGTARHCLVVEEGDLV
LWAEVCGTGESGGGNKKGRHQGLGNRDKSSSGTVKFPPDQGRGDEAQSMV
GD
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mRNA from alignment at D-mesarthrocarpus_Contig1076:20621..21378+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1076.10.1 ID=mRNA_D-mesarthrocarpus_Contig1076.10.1|Name=mRNA_D-mesarthrocarpus_Contig1076.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=758bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1076:20621..21378+ (Discosporangium mesarthrocarpum MT17_79)
CTGTGGCTTGGAGACTGCACGGCATGGATCCAAGTGCTGATCACTTCTTC
CCCCGTTAGTAAGGGGGCAGGGGCTGGGGGGACTGGAGTGTGCGGTGGGG
TGGACGTTGTGGACATTTGGGATGCCAATCATGTCCCCGTAGTTGCTGCT
GGAGAGATGGCCCATGGCACAGCTCCATCCAGAGGAAAAAGCCCAGATTC
ACAACAAGAAGTCCCTCCTCCTTCTCCTCACTGTTTTAAGGATGGGGTTG
TAGGGGCAGGCCCAGGACCTTGGGGGCACTCGCAAGCAGGAGTTTGCAGG
GCGACCGCTGCTCGGGGTGGGCGGTTGGCAATGGTCCGGCGATTCTCCAT
TTTGACGGAGATAGTGGCACGGCAGGTGGAAGGTGTAGGGACAGCGACAG
GGGCAGAGGCAGGGGCTATGGTTGACAGGGGCTTGACGAACAGAGGTGAG
GCGGAGGGCGGCTGTCCTGGCACTGGCCTGGGTGAATCGCGGGGGGGGCT
GCAGGACTGTGGGTCTACTGAGGCTTTCGAGACTTTTGAGGTGGGCGGGG
CAAAGGGGACGGCCCGGCACTGCCTGGTCGTGGAGGAGGGGGACCTAGTG
TTGTGGGCCGAGGTTTGCGGGACTGGAGAAAGTGGAGGTGGCAACAAAAA
AGGACGCCACCAAGGGCTCGGGAACAGGGACAAGAGCAGCAGCGGCACTG
TTAAGTTTCCGCCAGATCAGGGCCGGGGTGATGAAGCGCAGTCAATGGTG
GGTGACCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1076:20621..21378+

>mRNA_D-mesarthrocarpus_Contig1076.10.1 ID=mRNA_D-mesarthrocarpus_Contig1076.10.1|Name=mRNA_D-mesarthrocarpus_Contig1076.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=756bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1076:20621..21378+ (Discosporangium mesarthrocarpum MT17_79)
CTGTGGCTTGGAGACTGCACGGCATGGATCCAAGTGCTGATCACTTCTTC
CCCCGTTAGTAAGGGGGCAGGGGCTGGGGGGACTGGAGTGTGCGGTGGGG
TGGACGTTGTGGACATTTGGGATGCCAATCATGTCCCCGTAGTTGCTGCT
GGAGAGATGGCCCATGGCACAGCTCCATCCAGAGGAAAAAGCCCAGATTC
ACAACAAGAAGTCCCTCCTCCTTCTCCTCACTGTTTTAAGGATGGGGTTG
TAGGGGCAGGCCCAGGACCTTGGGGGCACTCGCAAGCAGGAGTTTGCAGG
GCGACCGCTGCTCGGGGTGGGCGGTTGGCAATGGTCCGGCGATTCTCCAT
TTTGACGGAGATAGTGGCACGGCAGGTGGAAGGTGTAGGGACAGCGACAG
GGGCAGAGGCAGGGGCTATGGTTGACAGGGGCTTGACGAACAGAGGTGAG
GCGGAGGGCGGCTGTCCTGGCACTGGCCTGGGTGAATCGCGGGGGGGGCT
GCAGGACTGTGGGTCTACTGAGGCTTTCGAGACTTTTGAGGTGGGCGGGG
CAAAGGGGACGGCCCGGCACTGCCTGGTCGTGGAGGAGGGGGACCTAGTG
TTGTGGGCCGAGGTTTGCGGGACTGGAGAAAGTGGAGGTGGCAACAAAAA
AGGACGCCACCAAGGGCTCGGGAACAGGGACAAGAGCAGCAGCGGCACTG
TTAAGTTTCCGCCAGATCAGGGCCGGGGTGATGAAGCGCAGTCAATGGTG
GGTGAC
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