mRNA_D-mesarthrocarpus_Contig10751.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10751.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10751.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A7S3XK30_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK30_HETAK)

HSP 1 Score: 89.0 bits (219), Expect = 1.100e-20
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLLS 207
            VYKFVMTGGPCAGKTT +  +S   +  GF V+TVPEAAT+LF+NGI + +L +++  F+FQW+LLS
Sbjct:   96 VYKFVMTGGPCAGKTTGLSKLSESLRNFGFSVYTVPEAATILFSNGIPFSDLTSEYNTFAFQWTLLS 162
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A6U4GPQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GPQ9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.230e-20
Identity = 39/66 (59.09%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLL 204
            ++KFV+TGGPCAGKTT++  +S+  +++GF V+ VPEAATLLF NG+S+ +LE++ FRF FQWSL+
Sbjct:   51 IFKFVLTGGPCAGKTTSLMRLSTFLRDRGFLVYVVPEAATLLFTNGVSFKDLEDEPFRFGFQWSLM 116
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A7R9U9S5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.310e-20
Identity = 39/66 (59.09%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLL 204
            ++KFV+TGGPCAGKTT++  +S+  +++GF V+ VPEAATLLF NG+S+ +LE++ FRF FQWSL+
Sbjct:   51 IFKFVLTGGPCAGKTTSLMRLSTFLRDRGFLVYVVPEAATLLFTNGVSFKDLESETFRFGFQWSLM 116
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A7S1G550_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G550_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 9.820e-18
Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLL 204
            +YK V+TGGPCAGKTTA+  +SS  + + FRV+TVPEAATLLF NG ++L+LE D  + +FQ +L+
Sbjct:   67 IYKIVLTGGPCAGKTTALARLSSFLRARAFRVYTVPEAATLLFGNGATFLDLETDDKQINFQTNLM 132
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A485K6X1_9STRA (Aste57867_105 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K6X1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.860e-17
Identity = 37/67 (55.22%), Postives = 55/67 (82.09%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLLS 207
            +YKFV+TGGPCAGKTT+++ +SS+F+E+GFRV+ VPEA+TLL   G  +++L+ +H   +FQW +LS
Sbjct:   39 IYKFVLTGGPCAGKTTSLDRLSSYFRERGFRVYMVPEASTLLQTGGAWFVDLQ-EHQIMNFQWQILS 104
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: T0RT95_SAPDV (AAA_28 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RT95_SAPDV)

HSP 1 Score: 82.8 bits (203), Expect = 5.620e-17
Identity = 37/67 (55.22%), Postives = 55/67 (82.09%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLLS 207
            +YKFV+TGGPCAGKTT++E +S++F+E+GFRV+ VPEA+TLL + G  +L+L+      +FQW++LS
Sbjct:   39 IYKFVLTGGPCAGKTTSLERLSTYFRERGFRVYMVPEASTLLQSGGAHFLDLKPTDI-INFQWAILS 104
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A7S2R796_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R796_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.330e-17
Identity = 37/65 (56.92%), Postives = 52/65 (80.00%), Query Frame = 1 
Query:   10 YKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLL 204
            YK V+TGGPCAGKTTA+E +SS  +E+GFRV+TVPEAAT+LF NG+ + +L+ +    +FQ +L+
Sbjct:   25 YKIVLTGGPCAGKTTALERLSSFLRERGFRVYTVPEAATMLFMNGVRFSDLDGEDRVVAFQTALM 89
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A2D4C0X5_PYTIN (AAA_28 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0X5_PYTIN)

HSP 1 Score: 80.1 bits (196), Expect = 1.430e-16
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLEL-ENDHFRFSFQWSLL 204
            +YKFV+TGGPCAGKTT+++ +S+ F+++GFRV+ VPEA+TLL   G  +L++ E DH   +FQW +L
Sbjct:   42 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDMQEKDHL--NFQWQIL 106
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A484EE22_BRELC (AAA_28 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE22_BRELC)

HSP 1 Score: 80.5 bits (197), Expect = 3.800e-16
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLELENDHFRFSFQWSLLS 207
            +YKFV+TGGPCAGKTT+++ +S+ F+E+GFRV+ VPEA+TLL   G  +L+L+      +FQW +LS
Sbjct:   36 IYKFVLTGGPCAGKTTSLDRLSTFFRERGFRVYVVPEASTLLQTGGAFFLDLQEKDV-LNFQWQILS 101
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Match: A0A2D4BIP4_PYTIN (AAA_28 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIP4_PYTIN)

HSP 1 Score: 80.1 bits (196), Expect = 4.950e-16
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:    7 VYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISYLEL-ENDHFRFSFQWSLL 204
            +YKFV+TGGPCAGKTT+++ +S+ F+++GFRV+ VPEA+TLL   G  +L++ E DH   +FQW +L
Sbjct:   36 IYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDMQEKDHL--NFQWQIL 100
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10751.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XK30_HETAK1.100e-2059.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6U4GPQ9_9STRA1.230e-2059.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U9S5_9STRA1.310e-2059.09Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1G550_9STRA9.820e-1857.58Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A485K6X1_9STRA2.860e-1755.22Aste57867_105 protein n=1 Tax=Aphanomyces stellatu... [more]
T0RT95_SAPDV5.620e-1755.22AAA_28 domain-containing protein n=3 Tax=Saprolegn... [more]
A0A7S2R796_9STRA8.330e-1756.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4C0X5_PYTIN1.430e-1653.73AAA_28 domain-containing protein (Fragment) n=1 Ta... [more]
A0A484EE22_BRELC3.800e-1653.73AAA_28 domain-containing protein n=1 Tax=Bremia la... [more]
A0A2D4BIP4_PYTIN4.950e-1653.73AAA_28 domain-containing protein (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10751contigD-mesarthrocarpus_Contig10751:2680..3028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008613127.1
Preferred nameunc-132
PFAMsAAA_28
Model size210
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0001894,GO:0001895,GO:0003674,GO:0005488,GO:0005525,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008289,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0017076,GO:0019001,GO:0032386,GO:0032388,GO:0032501,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0033157,GO:0035091,GO:0035639,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045494,GO:0048518,GO:0048871,GO:0050789,GO:0050896,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051716,GO:0060249,GO:0060341,GO:0065007,GO:0065008,GO:0070201,GO:0070300,GO:0071214,GO:0071478,GO:0071482,GO:0090087,GO:0090316,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1903827,GO:1903829,GO:1904951
Exons2
Evalue1.22e-17
EggNOG OGs28P3U@1|root,2QVQD@2759|Eukaryota
DescriptionAAA domain
Cds size207
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789208.775019-CDS-D-mesarthrocarpus_Contig10751:2679..27971680789208.775019-CDS-D-mesarthrocarpus_Contig10751:2679..2797Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10751 2680..2797 -
1680789208.7896447-CDS-D-mesarthrocarpus_Contig10751:2936..30251680789208.7896447-CDS-D-mesarthrocarpus_Contig10751:2936..3025Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10751 2937..3025 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789208.798813-UTR-D-mesarthrocarpus_Contig10751:3025..30281680789208.798813-UTR-D-mesarthrocarpus_Contig10751:3025..3028Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10751 3026..3028 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10751.2.1prot_D-mesarthrocarpus_Contig10751.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10751 2680..3025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10751.2.1

>prot_D-mesarthrocarpus_Contig10751.2.1 ID=prot_D-mesarthrocarpus_Contig10751.2.1|Name=mRNA_D-mesarthrocarpus_Contig10751.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=69bp
MVYKFVMTGGPCAGKTTAMEAVSSHFKEKGFRVFTVPEAATLLFNNGISY
LELENDHFRFSFQWSLLS*
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mRNA from alignment at D-mesarthrocarpus_Contig10751:2680..3028-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10751.2.1 ID=mRNA_D-mesarthrocarpus_Contig10751.2.1|Name=mRNA_D-mesarthrocarpus_Contig10751.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=349bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10751:2680..3028- (Discosporangium mesarthrocarpum MT17_79)
AAAATGGTGTACAAGTTCGTAATGACAGGCGGCCCCTGTGCTGGGAAGAC
AACTGCAATGGAGGCTGTAAGCTCGCATTTCAAGGAGAAGGGGTGCGTAC
CTCGTTGTGTATTCGTGATGAACTTGTTTTGCAATAACTGCTGTATTTGC
TCTTGCTGAACCAAAAAGCATATGAAACTTGGACAGATCGAGTTTTTGAT
ATTTGCATCCTCACTATTCCATGTCACGCAGGTTTCGCGTATTCACCGTT
CCCGAGGCAGCGACACTCCTATTCAACAATGGTATCAGCTATTTGGAACT
TGAAAACGACCACTTCAGGTTTTCTTTTCAATGGAGTCTACTATCGTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10751:2680..3028-

>mRNA_D-mesarthrocarpus_Contig10751.2.1 ID=mRNA_D-mesarthrocarpus_Contig10751.2.1|Name=mRNA_D-mesarthrocarpus_Contig10751.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=207bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10751:2680..3028- (Discosporangium mesarthrocarpum MT17_79)
ATGGTGTACAAGTTCGTAATGACAGGCGGCCCCTGTGCTGGGAAGACAAC
TGCAATGGAGGCTGTAAGCTCGCATTTCAAGGAGAAGGGGTTTCGCGTAT
TCACCGTTCCCGAGGCAGCGACACTCCTATTCAACAATGGTATCAGCTAT
TTGGAACTTGAAAACGACCACTTCAGGTTTTCTTTTCAATGGAGTCTACT
ATCGTAA
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