mRNA_D-mesarthrocarpus_Contig10751.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10751.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10751.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A6H5KR71_9PHAE (AAA_28 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KR71_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.340e-35
Identity = 59/90 (65.56%), Postives = 73/90 (81.11%), Query Frame = 1 
Query:    1 MNATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLPGGP 270
            M+  SLRD RYDG+ HLVTAA GAEEHY+LENN ARSE  E+A+DVD RT+  W+GHPRH++FDNSTDF  K+ R+ +A+SR+VGLP  P
Sbjct:   75 MDERSLRDGRYDGILHLVTAACGAEEHYSLENNEARSESVEMARDVDGRTEGVWLGHPRHLVFDNSTDFEAKMSRITSAASRLVGLPCRP 164
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A7S2UL73_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL73_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.480e-29
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:    4 NATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            N  +LR+ RY+ VFHLVTAA GAE +YTLENN  RSE PELA+ VD +TQ AWVGHP+  +FDNSTDF  K++RV+ A++++VGLP
Sbjct:  163 NPCNLREGRYNAVFHLVTAAEGAERYYTLENNAVRSETPELARVVDQKTQAAWVGHPKLCVFDNSTDFEGKLQRVVNATAKLVGLP 248
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A7S4W2Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W2Y7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.870e-28
Identity = 48/86 (55.81%), Postives = 68/86 (79.07%), Query Frame = 1 
Query:    4 NATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            N   LR+ RY+ VFH+VTAA GA ++YTLENN AR+E PELA+++D +T+ AWVGHP   +FDNST+F  K+ R++ A++++VGLP
Sbjct:   47 NVCELREGRYNAVFHVVTAAEGAAQYYTLENNEARTETPELARELDEKTRKAWVGHPNLRVFDNSTNFEGKLRRLVEATAKLVGLP 132
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A7S2R796_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R796_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.910e-28
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1 
Query:    4 NATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            N   +R+ RY+ VFHLVTAA GAE+ YTL NN ARSEPPE A++VD +TQ AW GHP H++FDNS+ F  K++RV+   +RIVGLP
Sbjct:  141 NDIMIREGRYNAVFHLVTAANGAEKFYTLANNNARSEPPEEAREVDVKTQRAWTGHPNHLIFDNSSGFEGKMQRVVDQMARIVGLP 226
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: B5YNE1_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE1_THAPS)

HSP 1 Score: 110 bits (276), Expect = 3.680e-27
Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 1 
Query:   10 TSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            + LR+ RY+ VFHLVTAA GAE+ YTL+NN  R+E PELA+++D  T+NAWVGHP   +FDNSTDF  K++RV+   +R+VGLP
Sbjct:  146 SELREGRYNAVFHLVTAAEGAEKFYTLDNNEVRTETPELARELDHMTRNAWVGHPNLKIFDNSTDFETKMQRVVEEMARLVGLP 229
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A7S1YQ31_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQ31_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.060e-26
Identity = 48/86 (55.81%), Postives = 68/86 (79.07%), Query Frame = 1 
Query:    4 NATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            N   LR+ RY+ VFH+VTAA GA ++YTLENN AR+E PELA+++D +T+ AWVGHP   +FDNST+F  K+ R++ A++++VGLP
Sbjct:   29 NVCELREGRYNAVFHVVTAAEGAAQYYTLENNEARTETPELARELDEKTRKAWVGHPNLRVFDNSTNFEGKLRRLVEATAKLVGLP 114
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A1Z5JYV0_FISSO (AAA_28 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYV0_FISSO)

HSP 1 Score: 109 bits (272), Expect = 2.660e-26
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:   16 LRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLPGGPLESAPEFFM 297
            +RD+RYD +FHL+TAA GAE  YTLENN  R+E  E A++VD +TQNAWVGHP     DNSTDF  K+ R++   S+IVGLP      + +F +
Sbjct:  137 IRDNRYDAIFHLITAADGAEPFYTLENNKVRTETKEEAREVDQKTQNAWVGHPHFYFIDNSTDFEGKMSRLVDTLSKIVGLPSNLKRRSAKFLL 230
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BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A0L0FJH1_9EUKA (AAA_28 domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJH1_9EUKA)

HSP 1 Score: 106 bits (265), Expect = 9.450e-26
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 1 
Query:    4 NATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLP 261
            N   LRD+RYD +F+LVTAA GAE HYTLENNM R+E    AK++D + Q+AW+GHP   +FDNSTDF  K+ R+I A+S  +GLP
Sbjct:   39 NNVMLRDERYDLIFYLVTAADGAEAHYTLENNMTRTEGLVAAKELDTKLQHAWIGHPHLHIFDNSTDFEGKMRRIINAASLALGLP 124
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: I2CP47_NANGC (AAA_28 domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP47_NANGC)

HSP 1 Score: 108 bits (269), Expect = 1.560e-25
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 1 
Query:   13 SLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLPGGPLESAPEFFM 297
            S+R+ RYD +FHLVTAA+GAE  Y+L NN+ R+E PE A++VD +TQ  W GHPRH + DNSTDF  K+ RV   ++R+VGLP  P   A  +F+
Sbjct:  218 SIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLP-RGADRWFL 311
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Match: A0A4D9CZL1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZL1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.900e-25
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 1 
Query:   13 SLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDARTQNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLPGGPLESAPEFFM 297
            S+R+ RYD +FHLVTAA+GAE  Y+L NN+ R+E PE A++VD +TQ  W GHPRH + DNSTDF  K+ RV   ++R+VGLP  P   A  +F+
Sbjct:  243 SIREGRYDAIFHLVTAAMGAEPFYSLLNNVTRTESPEFAREVDMKTQGVWNGHPRHYVIDNSTDFEGKLARVQDEAARLVGLPQLP-RGADRWFL 336
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10751.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR71_9PHAE8.340e-3565.56AAA_28 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2UL73_9STRA9.480e-2962.79Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4W2Y7_9STRA1.870e-2855.81Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2R796_9STRA5.910e-2860.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B5YNE1_THAPS3.680e-2759.52Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S1YQ31_9STRA1.060e-2655.81Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5JYV0_FISSO2.660e-2653.19AAA_28 domain-containing protein n=2 Tax=Fistulife... [more]
A0A0L0FJH1_9EUKA9.450e-2658.14AAA_28 domain-containing protein (Fragment) n=1 Ta... [more]
I2CP47_NANGC1.560e-2553.68AAA_28 domain-containing protein (Fragment) n=2 Ta... [more]
A0A4D9CZL1_9STRA1.900e-2553.68Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10751contigD-mesarthrocarpus_Contig10751:842..1594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6Y3
Preferred nameunc-132
PFAMsAAA_28
Model size297
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0001894,GO:0001895,GO:0003674,GO:0005488,GO:0005525,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008289,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0017076,GO:0019001,GO:0032386,GO:0032388,GO:0032501,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0033157,GO:0035091,GO:0035639,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045494,GO:0048518,GO:0048871,GO:0050789,GO:0050896,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051716,GO:0060249,GO:0060341,GO:0065007,GO:0065008,GO:0070201,GO:0070300,GO:0071214,GO:0071478,GO:0071482,GO:0090087,GO:0090316,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1903827,GO:1903829,GO:1904951
Exons2
Evalue4.55e-36
EggNOG OGs28P3U@1|root,2QVQD@2759|Eukaryota
DescriptionAAA domain
Cds size297
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789208.7325842-CDS-D-mesarthrocarpus_Contig10751:841..10031680789208.7325842-CDS-D-mesarthrocarpus_Contig10751:841..1003Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10751 842..1003 -
1680789208.7464325-CDS-D-mesarthrocarpus_Contig10751:1459..15941680789208.7464325-CDS-D-mesarthrocarpus_Contig10751:1459..1594Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10751 1460..1594 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10751.1.1prot_D-mesarthrocarpus_Contig10751.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10751 842..1594 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10751.1.1

>prot_D-mesarthrocarpus_Contig10751.1.1 ID=prot_D-mesarthrocarpus_Contig10751.1.1|Name=mRNA_D-mesarthrocarpus_Contig10751.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=99bp
MNATSLRDDRYDGVFHLVTAAIGAEEHYTLENNMARSEPPELAKDVDART
QNAWVGHPRHMLFDNSTDFPRKIERVIAASSRIVGLPGGPLESAPEFFM
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mRNA from alignment at D-mesarthrocarpus_Contig10751:842..1594-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10751.1.1 ID=mRNA_D-mesarthrocarpus_Contig10751.1.1|Name=mRNA_D-mesarthrocarpus_Contig10751.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=753bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10751:842..1594- (Discosporangium mesarthrocarpum MT17_79)
ATGAACGCGACCAGCCTGAGAGACGACCGGTATGATGGGGTGTTTCATCT
CGTCACGGCCGCCATTGGTGCAGAGGAGCACTACACCTTGGAGAACAACA
TGGCCCGCAGTGAGCCCCCTGAGCTGGCCAAGGATGTGAGAGGGGTGCAG
AGCAAAGGGAAAGGAGGAAAGAAAAAGAGAAGACAAAACTCTTCGAAGCG
GAAGAAAAACCGTGAAGTGGAAAAAAGAAAAAGACTGTGAAGTACTTAAG
AAGTAGAAGAAAAACTGTGAAGTAGGAAAAAGGAAAAACTGTGAAGTGGG
AAAAGAAAAGACTGTGAAGTACAGTACGGTACAGTACTTCAAACCACTTC
GTGGGTAACCCTAACCCTAGAAAATGAATACCCAGATGGCGAGGCCGGCC
TGGGGCAGCCATGTAGTCGGGTACTTCAAGGAGTAGGCCTAAGTCGGGGG
GTAACGAGGAACATGAGAGAGGTTGCTGATCCCCTTATGAGCTCCGCGGT
AGAGCTCTGCGCAGCGCATGCCGCGTGTTACAGGGCGTGGAGAAGAAGAT
CCTGGCCGCTCTAACGACGACCCGCCCCGCCTCCCGGAAAGGTGGACGCA
CGAACACAGAACGCCTGGGTCGGGCATCCAAGGCACATGCTCTTTGACAA
CTCTACTGACTTCCCCAGGAAGATAGAGAGGGTGATTGCGGCCTCGTCAA
GGATTGTTGGGCTGCCCGGGGGGCCGCTCGAGTCGGCCCCAGAGTTCTTC
ATG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10751:842..1594-

>mRNA_D-mesarthrocarpus_Contig10751.1.1 ID=mRNA_D-mesarthrocarpus_Contig10751.1.1|Name=mRNA_D-mesarthrocarpus_Contig10751.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=297bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10751:842..1594- (Discosporangium mesarthrocarpum MT17_79)
ATGAACGCGACCAGCCTGAGAGACGACCGGTATGATGGGGTGTTTCATCT
CGTCACGGCCGCCATTGGTGCAGAGGAGCACTACACCTTGGAGAACAACA
TGGCCCGCAGTGAGCCCCCTGAGCTGGCCAAGGATGTGGACGCACGAACA
CAGAACGCCTGGGTCGGGCATCCAAGGCACATGCTCTTTGACAACTCTAC
TGACTTCCCCAGGAAGATAGAGAGGGTGATTGCGGCCTCGTCAAGGATTG
TTGGGCTGCCCGGGGGGCCGCTCGAGTCGGCCCCAGAGTTCTTCATG
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