mRNA_D-mesarthrocarpus_Contig10746.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10746.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10746.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 2.250e-72
Identity = 133/183 (72.68%), Postives = 151/183 (82.51%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDED--------QRVSALARRVEQINSTNRQRLQ 525
            R VR CSYFHVPYHHR+APF+DMRLVPCG CGRKWVAE VL+T EAPE L++RGEGCLVEARVCRV RRQG+ E++AIRVSE LPFMEYELQRQLMLKLK LGVNAAF+L+S++QLGP LMVGSI+ATAVYVESLP PP+L V R      +D        +RV ALA RVE+I + NRQRLQ
Sbjct:   89 RTVRPCSYFHVPYHHRKAPFADMRLVPCGMCGRKWVAETVLSTVEAPENLISRGEGCLVEARVCRVHRRQGTSELEAIRVSEALPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPRLMVGSISATAVYVESLPTPPQLVVARPPRSLHQDGGXXXDARRRVLALASRVERIGAVNRQRLQ 271          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4AET6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AET6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.080e-53
Identity = 101/175 (57.71%), Postives = 134/175 (76.57%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
            R  + CSY HVPYHHR APF++M+LVPC  CG+KWV E+VLAT E P  L  RG G  ++ARVCR R+ + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY  ++P P  L ++R +AV+DE D+++  L R++EQI++ NRQRL
Sbjct:   59 RDAKPCSYCHVPYHHRVAPFTNMKLVPCMLCGKKWVPEVVLATCEPPARLPIRGPGVFIQARVCRTRQPERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDEKLVKLQRQIEQISAKNRQRL 233          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.440e-52
Identity = 101/175 (57.71%), Postives = 133/175 (76.00%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
            R  + CSY HVPYHHR APF++M+LVPC  CG+KWV E+VLAT E P  L  RG G  ++ARVCR R  + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY  ++P P  L ++R +AV+DE DQ++  L R++E+I++ NRQRL
Sbjct:  617 RDAKPCSYCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVVLATCEPPSRLPIRGPGVFIQARVCRSRPAERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGKSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDQKLVNLQRQIEKISAKNRQRL 791          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA)

HSP 1 Score: 199 bits (506), Expect = 7.570e-52
Identity = 100/172 (58.14%), Postives = 130/172 (75.58%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNR 513
            RP R CSY HVPYHHR APF++M+LVPC  CG+KWV E++LAT E PE L  RG G  ++ARVCR R +  +GE DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LKSEV +G  L++ + TATA+Y +++P P  L ++R +AV+DE D ++  L R++E I+S NR
Sbjct:  399 RPARPCSYCHVPYHHRLAPFANMKLVPCLLCGKKWVPEVILATVEPPERLPVRGSGVFIQARVCRSRPKS-TGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALYCDAMPAPRALEISRTIAVQDEEDHQLVRLQRQIENISSKNR 569          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4VGH9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VGH9_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.570e-50
Identity = 97/175 (55.43%), Postives = 131/175 (74.86%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
            RP R CSY HVPYHHR APF++M+LVPC  CG+KWV E++LAT E P  L  RG+G  ++ARV R R +  + E DA+ VSE LPF+EYEL RQLM+KLK+LG NAAF+LKSEV +G  L++G+ TATA+Y +++PPP  L ++R +AV+DE D ++  L  ++E+I+  NR RL
Sbjct:  354 RPARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEVILATVEPPARLPVRGQGVFIQARVMRSRPK-ATNETDALAVSESLPFLEYELARQLMVKLKILGRNAAFSLKSEVDVGSQLIIGTATATALYCDAMPPPRVLEISRTIAVQDEEDHQLVKLQHQIEKISERNRHRL 527          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 5.690e-50
Identity = 97/175 (55.43%), Postives = 132/175 (75.43%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
            R  + CS+ HVPYHHR APF++M+LVPC  CG+KWV E++LAT E P  L  RG G  ++ARVCR R  + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY  ++P P  L ++R +AV+DE D ++  L +++E+I++ NRQRL
Sbjct:  597 RDAKPCSFCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVLLATCEPPARLPIRGPGVFIQARVCRSRPPEKNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDHQLVKLQKQIEKISAKNRQRL 771          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS)

HSP 1 Score: 192 bits (489), Expect = 7.750e-50
Identity = 98/172 (56.98%), Postives = 128/172 (74.42%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNR 513
            R  R CSY HVPYHHR APF++M+LVPC  CG+KWV E++LAT E P  L  RG G  V+ARVCR R R  +GE DA+ VSE LPF+E++L RQLMLKLK+LG NAAF+L+SE+ +G  L+V + TATAVY E++PPP  L ++R +AV+DE DQ++  L R +E  ++ NR
Sbjct:  600 RLARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEIILATVEPPSRLPIRGTGVFVQARVCRTRPR-ATGESDALAVSEALPFLEFDLARQLMLKLKILGRNAAFSLRSEIDVGSQLIVATATATAVYCEAMPPPRVLEISRTIAVQDEEDQQLVKLQRLIETFSARNR 770          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S2RRS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRS9_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.170e-49
Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVT 432
            R  R CSY HVPYHHR APFS+M+LVPC  CG+KWV E++LAT E P  L  RG G  ++ARVCR R +  +GE DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LKSEV +G  L++ + TATA++ +++PPP  L ++
Sbjct:   61 RSARPCSYCHVPYHHRLAPFSNMKLVPCLLCGKKWVPEVILATIEPPARLPVRGPGAFIQARVCRSRPKS-TGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALFCDAMPPPRVLQIS 203          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC)

HSP 1 Score: 188 bits (478), Expect = 3.610e-48
Identity = 97/175 (55.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query:    1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
            R  + CSY HVPYHHR+APF +M+LVPC  CG+KWV E +LAT E P  L  RG G  ++ARVCR R +  SGE DA+ VSE LPF+E++L RQLMLKLK+LG NAAF LKSEV +G  L++ + TATAVY E++PPP  L + R +A  DE D ++  L R +E I++ NR  L
Sbjct:  368 RLAKPCSYCHVPYHHRQAPFQNMKLVPCQMCGKKWVPETILATCEPPSRLPIRGHGTFIQARVCRTRPK-ASGENDALAVSEALPFLEFDLARQLMLKLKILGRNAAFGLKSEVDVGGQLIIATATATAVYCEAMPPPRVLEIDRTIACLDEEDDQLVRLQRLIETISARNRHYL 541          
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.760e-48
Identity = 110/243 (45.27%), Postives = 137/243 (56.38%), Query Frame = 1
Query:    7 VRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLK-----------------------------------------------VLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVR--------DEDQRVSALARR----------------VEQINSTNRQRL 522
            VR CSY HVPY HR APF  MRL PC  C RKWVA+ VLAT EAP  + TRGEGCL+EARVCRV RR G  E DAIRVSE LPF+EYELQRQL LKLK                                               V+G+NA F+L++++ +GPSL++G+IT TAVYVE+LP PP L +   +A R        D +QR+ A+ ++                +EQ+++TNRQRL
Sbjct:  633 VRPCSYCHVPYQHRLAPFGSMRLTPCCVCRRKWVAQTVLATIEAPPAMTTRGEGCLIEARVCRVIRRTGVAETDAIRVSESLPFIEYELQRQLSLKLKALAQPILFVSHNSPATAGSVGTTSVLRQRNPHHLLLALCGLYACHVQVMGMNAVFSLETQLAVGPSLLIGTITGTAVYVEALPSPPILRIAPPVAARGMTAGGEQDSEQRLLAMQKKPAMNALLLPAVAWSSQIEQLSATNRQRL 875          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIM0_ECTSI2.250e-7272.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4AET6_9STRA4.080e-5357.71Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A448YU60_9STRA2.440e-5257.71C2 domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]
A0A7S4N180_9STRA7.570e-5258.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4VGH9_9STRA1.570e-5055.43Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A1E7F3B6_9STRA5.690e-5055.43C2 domain-containing protein n=1 Tax=Fragilariopsi... [more]
B8BXV2_THAPS7.750e-5056.98C2 domain-containing protein (Fragment) n=1 Tax=Th... [more]
A0A7S2RRS9_9STRA4.170e-4959.72Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
K0T113_THAOC3.610e-4855.43Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A836CKY6_9STRA5.760e-4845.27C2 domain-containing protein n=1 Tax=Tribonema min... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10746contigD-mesarthrocarpus_Contig10746:177..3314 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIM0
Preferred nameC2CD5
PFAMsC2
Model size1421
Max annot lvl2759|Eukaryota
KEGG koko:K20051
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0001505,GO:0001726,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005543,GO:0005544,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006906,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007268,GO:0007269,GO:0008104,GO:0008150,GO:0008286,GO:0008289,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010638,GO:0010827,GO:0010828,GO:0012506,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019905,GO:0023052,GO:0023061,GO:0030276,GO:0030659,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0032386,GO:0032388,GO:0032587,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033043,GO:0033157,GO:0034613,GO:0034762,GO:0034764,GO:0038028,GO:0042221,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043434,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0046324,GO:0046326,GO:0046872,GO:0046903,GO:0046907,GO:0048284,GO:0048489,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048791,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0055085,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0065002,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090087,GO:0090174,GO:0090313,GO:0090314,GO:0090316,GO:0097479,GO:0097480,GO:0097708,GO:0098590,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0120025,GO:0120038,GO:1900076,GO:1900078,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903305,GO:1903530,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1990778,GO:2001273,GO:2001275
Exons4
Evalue2.21e-62
EggNOG OGsKOG1031@1|root,KOG1031@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-27_000260.1
Descriptioninsulin receptor signaling pathway via phosphatidylinositol 3-kinase
Cds size519
COG categoryS
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10746.1.1prot_D-mesarthrocarpus_Contig10746.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10746 243..2478 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789207.9892678-UTR-D-mesarthrocarpus_Contig10746:176..2421680789207.9892678-UTR-D-mesarthrocarpus_Contig10746:176..242Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10746 177..242 +
1680789208.0524588-UTR-D-mesarthrocarpus_Contig10746:2478..33141680789208.0524588-UTR-D-mesarthrocarpus_Contig10746:2478..3314Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10746 2479..3314 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789208.0056925-CDS-D-mesarthrocarpus_Contig10746:242..3201680789208.0056925-CDS-D-mesarthrocarpus_Contig10746:242..320Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10746 243..320 +
1680789208.0188484-CDS-D-mesarthrocarpus_Contig10746:994..11111680789208.0188484-CDS-D-mesarthrocarpus_Contig10746:994..1111Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10746 995..1111 +
1680789208.0308692-CDS-D-mesarthrocarpus_Contig10746:1874..19521680789208.0308692-CDS-D-mesarthrocarpus_Contig10746:1874..1952Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10746 1875..1952 +
1680789208.0405347-CDS-D-mesarthrocarpus_Contig10746:2232..24781680789208.0405347-CDS-D-mesarthrocarpus_Contig10746:2232..2478Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10746 2233..2478 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10746.1.1

>prot_D-mesarthrocarpus_Contig10746.1.1 ID=prot_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=173bp
MRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGS
GEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMV
GSITATAVYVESLPPPPKLSVTRALAVRDEDQRVSALARRVEQINSTNRQ
RLQVRHGMCGFDILGAFLFMMP*
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mRNA from alignment at D-mesarthrocarpus_Contig10746:177..3314+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10746.1.1 ID=mRNA_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10746:177..3314+ (Discosporangium mesarthrocarpum MT17_79)
CGCCCAGTCCGGCAGTGCTCCTACTTCCATGTGCCCTACCACCACCGCCG AGCTCCCTTCTCCGATATGCGGCTGGTGCCATGTGGGACCTGCGGCCGCA AGTGGGTTGCGGAGATGGTCCTTGCCACCACTGAGGCCCCGGAGGTGAGT GTTGGGGAGAGTTTGGTGGAAGGCATTTTTGTTGTTGTCGTTGCCATCAT CATCACTTTTGTTGCCGTCCTTGTTGTTCATTGTTGTTTGTAAGGCAACT ATTGTTGTTGTGGTGGTGGTGGTGGTGATGGCAGTGCTGCTGTGCCAGTA GCAGTGGTATACTACTATTGTCCATGAGGCAGAATCGCTGCTTTGATTGG CCTGGTATTGGATTGGCATGGGGGGGTGGCTCAGGTGCAATGAAGAGTTG TATGTTGTGGGGCTGGTGGACATGTCCAGGTTTGTGATGCAAGATGCTCC CTCTGATGATATACCTAGTACAGAACAGAGTTTAATATGTATGCAGGGGG GTGGGGGTGGGGGTGATTTGTTTGTGTGCCTTTCTGCTTTCCCTGCCTCC CGCCCCAATCCTGTAGCATGCTGGTCTGCACATAAATAACATTGATGGAC CACAGGGCAAGAAGGCCTCAGACTGGCGGAGCAGATAGTCTCTGGAGCAA TTTGCCCTGTAATAGTGCACGTGATTCATTGGCCCATTTGAACCAAGAAG AAACCACCAAAAACTGGTGCCCCTGCCTCTTGATGGTGAGACTACGTGCG ACAGACACCCAGCCCACAGGCTGTACATATATATTTTATTACCTCTGTTC ATGGAATGGCTGAGGCAGGGGTTGCTGACGAGGGGAGAAGGTTGCCTCGT GGAGGCCAGGGTCTGCAGGGTGCGCCGCCGACAGGGGTCAGGGGAGGTGG ATGCCATCAGGGTTTCTGAAGGCCTGCCTTTCATGGTGAGTTTTTCTTGT CCTGGCATACGTGGGGGAGTACGTTCGAGCAATCTGTGGGTTTCAGAGCT AGAAGCTACGTCAAGGGCACAGAGGTTTGCAGCTGTGGGGAATGAATGCA GAGTCAGGGCTAGTAGAGTTCTAAAGATTGAGGTCTACTGGCGAGCCGCA TAGGTTGGGCATTCAAAAAGATTTGTCGCCCAGCTGTGAGCTTGCTTTGG CTCTACAGTATAGGTCCAAGACTCATTGCATACAATGAGTGGGGAGAGGT CACCAGAGCTGCATGTGTGTAGCCACTGATCAAGCCCTGTTGAGCCTTGG TACACTACTTTTTTTGTGTGTGCTCCTGGGGACAGATATCAAACATATAG GATCTGATGACATTCCCTGCCATTTTGGGTTGAACCTTTCCCTTGCACAG TGGGAAGACAATCAGCATGCATGCCTCAGGAGAGTAATTGCACTACAGCA GTAGTGCAATTGCACGCCTACACAAAGTATGAAGGGAGACCGGAGTATTT CTGAGCAGGTCTTGCTGGGGACAAGCCGGGCTCCTTCCTTGCCCCGACTG GTTGTCCCCAGCAAGACCTGTTGAGAAATGCTCTGGTCTCCCTCCATACT TTTGTGTGGGCACGTGCTTGCACTGCGGTAGGAATTGCTCGGGCTGCAGC TTCTTCCTTGGTCGACTTACAAAAGACTCTTCCCTCCCCGTGCTTCAGTT GAAAATCGTAAGTTGATCAATCTGGTTGCTGAACCACCCTCTCTGCAGGA GTATGAGCTGCAGCGCCAACTCATGCTGAAGCTGAAGGTCCTTGGAGTCA ATGCCGCCTTTGCCTTGAAATCAGAGGTGTGTGTGTGTGTGTTGCTACTT GCTTGCACAGACATCCCACGTTGGCCTGTTGATAGTCAGCTTCAGCTTAT GCCCCTCTCCTGCCTCAGACCACCTTGCACAACCTTCACTGGCCCCAAGG TAACTAACCCCATTCTCCCTTCCCACAGGTTTACGACTGACCTGATCTGG CGTGATTCATCTCCCTTCAAATCAGCTCCCAATGCTTTCCCCCAGCACCC TCTGTGCTCTGTTTCAGCTGATCTTTTTTGACCCCTTTCCCACTCCATGA GAATAGGTGCAGCTTGGGCCTTCCTTGATGGTGGGCTCAATAACAGCGAC AGCAGTCTATGTGGAGTCCTTGCCCCCGCCTCCAAAGCTGAGTGTCACCC GCGCATTGGCTGTGAGGGATGAGGACCAGAGGGTTTCCGCATTGGCAAGG CGTGTGGAGCAGATCAATTCCACCAACCGCCAGCGGTTGCAGGTACGGCA TGGTATGTGTGGTTTTGATATTTTGGGTGCCTTTTTGTTCATGATGCCAT GAAAAATACATGTCTCAAATGCAGCTTGTCAACCGCTTCATATGGCCTCA AAGCAAGGAGAGGGGCAAGGCTGAGGGAGGGGGAGGGGCTGCTTTGTCCA CAGGTTCCCCCCCAACCTCTGCCTTGGAAGAACCGGGCAACACAATTTCA TTCTGGGATACGGTCAGGGTTTCTGGCTCAGGGGTCCTTACAGCACTTCC AACCACTATGCTTCCCTGTCTCCCCCTTGTACATTGGTATGCCCTGACCC TGAAGTCCTTGGCCCCAGTGGCTCATGGTGGAGGCAGTGGCTCTGCAAGG CCTGCCACCACTGACCACAGAGAGAGTTGGGCTCGGGACAAAGAGGAAAA CAAACACCAGGAACAGATCCAGCGCAGGCAGCAAGTGTCCCTCAGGGAGC AACATCAGCGGCACCAGCAGCATTGGCAGCATTGGCAGAGGTGGCGGAGG TGGGTACAGCGGGGAAGCACAGGCAGGGCCCCGGCCACACCCCACACTTC CCCATCCCCCTGGGAGGAGGACAGAGGAGGCTTGGGGGTGGCCGATAAAG GGACAGAGGTTGACAGGGTAGGGGAGGCAGGGGCTGCAGCCTTGGGGGCG GCAGTCACTCCTGCTTCAGGACAGACAATGTTGGATGCCACAGAGCCCAC AGCAGCTATGCTCCTAGGTACAATACCTGAGCAAGGGAAGTTGGGGTTAT CATCGCTGCCCAGAGGCACCACAGAGCCTGAGGCTGGCTTGGGTTTGGGG CTGGGGCAGGAGAAGGAGATAATGGGAGATGGGGAGGAGAAGGAGAAAGA AGGACAGCCTTCCCGTGCACCAGGAAGTGTTTCACGTA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10746:177..3314+

>mRNA_D-mesarthrocarpus_Contig10746.1.1 ID=mRNA_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=519bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10746:177..3314+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGGCTGGTGCCATGTGGGACCTGCGGCCGCAAGTGGGTTGCGGAGAT
GGTCCTTGCCACCACTGAGGCCCCGGAGGGGTTGCTGACGAGGGGAGAAG
GTTGCCTCGTGGAGGCCAGGGTCTGCAGGGTGCGCCGCCGACAGGGGTCA
GGGGAGGTGGATGCCATCAGGGTTTCTGAAGGCCTGCCTTTCATGGAGTA
TGAGCTGCAGCGCCAACTCATGCTGAAGCTGAAGGTCCTTGGAGTCAATG
CCGCCTTTGCCTTGAAATCAGAGGTGCAGCTTGGGCCTTCCTTGATGGTG
GGCTCAATAACAGCGACAGCAGTCTATGTGGAGTCCTTGCCCCCGCCTCC
AAAGCTGAGTGTCACCCGCGCATTGGCTGTGAGGGATGAGGACCAGAGGG
TTTCCGCATTGGCAAGGCGTGTGGAGCAGATCAATTCCACCAACCGCCAG
CGGTTGCAGGTACGGCATGGTATGTGTGGTTTTGATATTTTGGGTGCCTT
TTTGTTCATGATGCCATGA
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