mRNA_D-mesarthrocarpus_Contig10746.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI) HSP 1 Score: 259 bits (661), Expect = 2.250e-72 Identity = 133/183 (72.68%), Postives = 151/183 (82.51%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDED--------QRVSALARRVEQINSTNRQRLQ 525
R VR CSYFHVPYHHR+APF+DMRLVPCG CGRKWVAE VL+T EAPE L++RGEGCLVEARVCRV RRQG+ E++AIRVSE LPFMEYELQRQLMLKLK LGVNAAF+L+S++QLGP LMVGSI+ATAVYVESLP PP+L V R +D +RV ALA RVE+I + NRQRLQ
Sbjct: 89 RTVRPCSYFHVPYHHRKAPFADMRLVPCGMCGRKWVAETVLSTVEAPENLISRGEGCLVEARVCRVHRRQGTSELEAIRVSEALPFMEYELQRQLMLKLKCLGVNAAFSLRSDIQLGPRLMVGSISATAVYVESLPTPPQLVVARPPRSLHQDGGXXXDARRRVLALASRVERIGAVNRQRLQ 271
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4AET6_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AET6_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.080e-53 Identity = 101/175 (57.71%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
R + CSY HVPYHHR APF++M+LVPC CG+KWV E+VLAT E P L RG G ++ARVCR R+ + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY ++P P L ++R +AV+DE D+++ L R++EQI++ NRQRL
Sbjct: 59 RDAKPCSYCHVPYHHRVAPFTNMKLVPCMLCGKKWVPEVVLATCEPPARLPIRGPGVFIQARVCRTRQPERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDEKLVKLQRQIEQISAKNRQRL 233
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.440e-52 Identity = 101/175 (57.71%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
R + CSY HVPYHHR APF++M+LVPC CG+KWV E+VLAT E P L RG G ++ARVCR R + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY ++P P L ++R +AV+DE DQ++ L R++E+I++ NRQRL
Sbjct: 617 RDAKPCSYCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVVLATCEPPSRLPIRGPGVFIQARVCRSRPAERNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGKSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDQKLVNLQRQIEKISAKNRQRL 791
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.570e-52 Identity = 100/172 (58.14%), Postives = 130/172 (75.58%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNR 513
RP R CSY HVPYHHR APF++M+LVPC CG+KWV E++LAT E PE L RG G ++ARVCR R + +GE DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LKSEV +G L++ + TATA+Y +++P P L ++R +AV+DE D ++ L R++E I+S NR
Sbjct: 399 RPARPCSYCHVPYHHRLAPFANMKLVPCLLCGKKWVPEVILATVEPPERLPVRGSGVFIQARVCRSRPKS-TGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALYCDAMPAPRALEISRTIAVQDEEDHQLVRLQRQIENISSKNR 569
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S4VGH9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VGH9_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.570e-50 Identity = 97/175 (55.43%), Postives = 131/175 (74.86%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
RP R CSY HVPYHHR APF++M+LVPC CG+KWV E++LAT E P L RG+G ++ARV R R + + E DA+ VSE LPF+EYEL RQLM+KLK+LG NAAF+LKSEV +G L++G+ TATA+Y +++PPP L ++R +AV+DE D ++ L ++E+I+ NR RL
Sbjct: 354 RPARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEVILATVEPPARLPVRGQGVFIQARVMRSRPK-ATNETDALAVSESLPFLEYELARQLMVKLKILGRNAAFSLKSEVDVGSQLIIGTATATALYCDAMPPPRVLEISRTIAVQDEEDHQLVKLQHQIEKISERNRHRL 527
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA) HSP 1 Score: 194 bits (492), Expect = 5.690e-50 Identity = 97/175 (55.43%), Postives = 132/175 (75.43%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
R + CS+ HVPYHHR APF++M+LVPC CG+KWV E++LAT E P L RG G ++ARVCR R + + E DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LK+EV +G SL++ ++TATAVY ++P P L ++R +AV+DE D ++ L +++E+I++ NRQRL
Sbjct: 597 RDAKPCSFCHVPYHHRLAPFTNMKLVPCMLCGKKWVPEVLLATCEPPARLPIRGPGVFIQARVCRSRPPEKNSESDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKNEVDVGRSLIISTVTATAVYCTAMPSPRILEISRTIAVQDEEDHQLVKLQKQIEKISAKNRQRL 771
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS) HSP 1 Score: 192 bits (489), Expect = 7.750e-50 Identity = 98/172 (56.98%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNR 513
R R CSY HVPYHHR APF++M+LVPC CG+KWV E++LAT E P L RG G V+ARVCR R R +GE DA+ VSE LPF+E++L RQLMLKLK+LG NAAF+L+SE+ +G L+V + TATAVY E++PPP L ++R +AV+DE DQ++ L R +E ++ NR
Sbjct: 600 RLARPCSYCHVPYHHRLAPFTNMKLVPCLLCGKKWVPEIILATVEPPSRLPIRGTGVFVQARVCRTRPR-ATGESDALAVSEALPFLEFDLARQLMLKLKILGRNAAFSLRSEIDVGSQLIVATATATAVYCEAMPPPRVLEISRTIAVQDEEDQQLVKLQRLIETFSARNR 770
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A7S2RRS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RRS9_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.170e-49 Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVT 432
R R CSY HVPYHHR APFS+M+LVPC CG+KWV E++LAT E P L RG G ++ARVCR R + +GE DA+ VSE LPF+EYEL RQLMLKLKVLG NAAF+LKSEV +G L++ + TATA++ +++PPP L ++
Sbjct: 61 RSARPCSYCHVPYHHRLAPFSNMKLVPCLLCGKKWVPEVILATIEPPARLPVRGPGAFIQARVCRSRPKS-TGETDALAVSEALPFLEYELARQLMLKLKVLGRNAAFSLKSEVDVGSQLIIATATATALFCDAMPPPRVLQIS 203
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC) HSP 1 Score: 188 bits (478), Expect = 3.610e-48 Identity = 97/175 (55.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 1 RPVRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLKVLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVRDE-DQRVSALARRVEQINSTNRQRL 522
R + CSY HVPYHHR+APF +M+LVPC CG+KWV E +LAT E P L RG G ++ARVCR R + SGE DA+ VSE LPF+E++L RQLMLKLK+LG NAAF LKSEV +G L++ + TATAVY E++PPP L + R +A DE D ++ L R +E I++ NR L
Sbjct: 368 RLAKPCSYCHVPYHHRQAPFQNMKLVPCQMCGKKWVPETILATCEPPSRLPIRGHGTFIQARVCRTRPK-ASGENDALAVSEALPFLEFDLARQLMLKLKILGRNAAFGLKSEVDVGGQLIIATATATAVYCEAMPPPRVLEIDRTIACLDEEDDQLVRLQRLIETISARNRHYL 541
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA) HSP 1 Score: 188 bits (477), Expect = 5.760e-48 Identity = 110/243 (45.27%), Postives = 137/243 (56.38%), Query Frame = 1
Query: 7 VRQCSYFHVPYHHRRAPFSDMRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSGEVDAIRVSEGLPFMEYELQRQLMLKLK-----------------------------------------------VLGVNAAFALKSEVQLGPSLMVGSITATAVYVESLPPPPKLSVTRALAVR--------DEDQRVSALARR----------------VEQINSTNRQRL 522
VR CSY HVPY HR APF MRL PC C RKWVA+ VLAT EAP + TRGEGCL+EARVCRV RR G E DAIRVSE LPF+EYELQRQL LKLK V+G+NA F+L++++ +GPSL++G+IT TAVYVE+LP PP L + +A R D +QR+ A+ ++ +EQ+++TNRQRL
Sbjct: 633 VRPCSYCHVPYQHRLAPFGSMRLTPCCVCRRKWVAQTVLATIEAPPAMTTRGEGCLIEARVCRVIRRTGVAETDAIRVSESLPFIEYELQRQLSLKLKALAQPILFVSHNSPATAGSVGTTSVLRQRNPHHLLLALCGLYACHVQVMGMNAVFSLETQLAVGPSLLIGTITGTAVYVEALPSPPILRIAPPVAARGMTAGGEQDSEQRLLAMQKKPAMNALLLPAVAWSSQIEQLSATNRQRL 875 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10746.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10746.1.1 >prot_D-mesarthrocarpus_Contig10746.1.1 ID=prot_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=173bp MRLVPCGTCGRKWVAEMVLATTEAPEGLLTRGEGCLVEARVCRVRRRQGSback to top mRNA from alignment at D-mesarthrocarpus_Contig10746:177..3314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10746.1.1 ID=mRNA_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10746:177..3314+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10746:177..3314+ >mRNA_D-mesarthrocarpus_Contig10746.1.1 ID=mRNA_D-mesarthrocarpus_Contig10746.1.1|Name=mRNA_D-mesarthrocarpus_Contig10746.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=519bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10746:177..3314+ (Discosporangium mesarthrocarpum MT17_79)back to top |