mRNA_D-mesarthrocarpus_Contig10739.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: D7FYI0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI0_ECTSI) HSP 1 Score: 263 bits (671), Expect = 1.280e-79 Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 1 RVAVVPMFTLLPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
R V M LP +LP P+ T + FI P FGTTV+GNSHGFD +GSTSGYVLW+NGRG+MIDPPPYAS+ILQASNIRP+LIAGVI+THCH+DHDAGTFQKVL DG+VNIISTR TIY+SFIRKY ALSG+ ++R SHKF PV IG++LRL+GA FDFFYTLHSIPCVGFEV
Sbjct: 563 RTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNGSTSGYVLWINGRGYMIDPPPYASMILQASNIRPSLIAGVIVTHCHADHDAGTFQKVLLDGQVNIISTR---TIYESFIRKYTALSGMSGDLIRYSHKFIPVKIGQTLRLNGACFDFFYTLHSIPCVGFEV 735
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.870e-75 Identity = 122/176 (69.32%), Postives = 143/176 (81.25%), Query Frame = 1
Query: 1 RVAVVPMFTLLPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
R A+V F LP+ LPFHP+PT F PP FG TV+GNSHGFD SGSTSGYVLW+N RG+MIDPPPYA VIL+ NIRP+LI GVI+THCH+DHDAGTFQK+L +G+V +I+TR TIY SFIRKY ALSGL +LRQ+H+F PVTIGE+LRL GA +FFYTLHSIPC+G EV
Sbjct: 245 RRAIVSQFIDLPDVLPFHPEPTNTVFEPPAFGVTVLGNSHGFDPSGSTSGYVLWINRRGYMIDPPPYACVILRNFNIRPSLIDGVIVTHCHADHDAGTFQKILFEGQVTVITTR---TIYGSFIRKYAALSGLPPPLLRQTHRFLPVTIGETLRLRGASLNFFYTLHSIPCIGLEV 417
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A6H5KVN3_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN3_9PHAE) HSP 1 Score: 233 bits (595), Expect = 2.400e-68 Identity = 123/212 (58.02%), Postives = 143/212 (67.45%), Query Frame = 1
Query: 31 LPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISG----------------------------------------------STSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
LP LP P+ + FI P FGTTV+GNSHGFD +G STSGYVLW+NGRG+MIDPPPYAS+ILQASNIRP+LIAGVI+THCH+DHDAGTFQKVL DG++NI+STR TIY+SFIRKY ALSG+ ++R SHKF PV IG++LRL+GA FDFFYTLHSIPCVGFEV
Sbjct: 573 LPTTLPSQPKQREDEFIAPTFGTTVLGNSHGFDPNGRGGVRLFKVLQASKQISALHSTLLSEPKSKSSPALCERCLIILKIRSTSGYVLWINGRGYMIDPPPYASMILQASNIRPSLIAGVIVTHCHADHDAGTFQKVLLDGQINIVSTR---TIYESFIRKYTALSGMSGDLIRFSHKFIPVKIGQTLRLNGASFDFFYTLHSIPCVGFEV 781
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A7S0C4K8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C4K8_9STRA) HSP 1 Score: 199 bits (506), Expect = 3.170e-58 Identity = 96/151 (63.58%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 76 FIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
F PP FG TV+GNSHGFD SGSTSGYVLW+NGRG MIDPPPY+S L+ IR I G+ILTHCH+DHDAG FQKVL V +I+T TIY SFIRKY ALS +++L+ SH++ P IG+ LR GA F+F YTLHSIPCVGF V
Sbjct: 172 FHPPSFGVTVLGNSHGFDKSGSTSGYVLWINGRGVMIDPPPYSSATLEREGIRQRTIVGIILTHCHADHDAGAFQKVLTGSPVVVITTP---TIYKSFIRKYAALSEFNTALLKHSHRYKPAIIGQPLRFQGATFEFTYTLHSIPCVGFRV 319
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A7S4MP62_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MP62_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.520e-58 Identity = 98/151 (64.90%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 76 FIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
F PP FG TV+GNSHGFD GSTSGYVLW+NGRG MIDPPPY++ L+ IRP I G+ILTHCH+DHDAG FQK+L D +V +I+T TIY+SFIRKY ALS L S+LR SH+ TP IG LR GA F F YTLH+IPCVGF V
Sbjct: 651 FHPPSFGVTVLGNSHGFDKQGSTSGYVLWINGRGVMIDPPPYSTATLEREGIRPGTIVGIILTHCHADHDAGAFQKILTDSRVAVITTP---TIYNSFIRKYAALSALSPSLLRHSHRHTPAVIGAPLRFQGATFHFTYTLHTIPCVGFRV 798
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A7S2PTG5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PTG5_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.480e-58 Identity = 99/151 (65.56%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 76 FIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
F PP FG TV+GNSHGFD SGSTSGYVLW+NGRG MIDPPPY+S L+ IRP I G+ILTHCH+DHDAG FQKVL V +I+T TIY+SFIRKY ALS L ++L+ SH++ P IGE LR GA F F YTLHSIPCVGF V
Sbjct: 56 FHPPSFGVTVLGNSHGFDKSGSTSGYVLWINGRGVMIDPPPYSSATLEREGIRPRTIVGIILTHCHADHDAGAFQKVLTGSPVVVITTP---TIYNSFIRKYAALSSLSPALLKHSHRYKPAVIGEPLRFQGATFHFTYTLHSIPCVGFRV 203
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: K0SUD6_THAOC (Lactamase_B domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUD6_THAOC) HSP 1 Score: 205 bits (521), Expect = 5.380e-58 Identity = 99/151 (65.56%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 76 FIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
F PP FG TV+GNSHGFD SGSTSGYVLW+NGRG MIDPPPY+S L+ IRP I G+ILTHCH+DHDAG FQKVL V +I+T TIY SFIRKY ALS L ++LR SH++ P IGE LR GA F+F YTLH+IPCVGF V
Sbjct: 171 FCPPSFGVTVLGNSHGFDKSGSTSGYVLWINGRGVMIDPPPYSSATLEREGIRPRTIVGIILTHCHADHDAGAFQKVLTGSPVVVITTP---TIYKSFIRKYAALSSLSPALLRHSHRYKPAIIGEPLRFQGATFNFTYTLHAIPCVGFRV 318
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: B8C045_THAPS (Lactamase_B domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C045_THAPS) HSP 1 Score: 204 bits (520), Expect = 6.100e-58 Identity = 100/151 (66.23%), Postives = 112/151 (74.17%), Query Frame = 1
Query: 76 FIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
F PP FG TV+GNSHGFD SGSTSGYVLW+NGRG MIDPPPY+S L+ IRP I G+ILTHCH+DHDAG FQKVL V +I+T TIY SFIRKY ALS L ++LR SH++ P IGE LR GA F F YTLHSIPCVGF V
Sbjct: 550 FHPPSFGVTVLGNSHGFDKSGSTSGYVLWINGRGVMIDPPPYSSATLEREGIRPRTIVGIILTHCHADHDAGAFQKVLTGSPVVVITTP---TIYKSFIRKYAALSSLSPALLRHSHRYKPAIIGEPLRFQGATFHFTYTLHSIPCVGFRV 697
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: W4GLH8_9STRA (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLH8_9STRA) HSP 1 Score: 200 bits (509), Expect = 5.500e-57 Identity = 104/174 (59.77%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 7 AVVPMFTLLPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFEV 528
A+V F LP P Q EAF PP FG TV+GNSHGFD SG TSGYVLW+N RG MIDPPP++S IL A+NI P +I GVI+THCH+DHDAGTFQK+L +G+V++I+T TIY SF+RKY ALSG S L++ F V I + + GA F FFY+LHSIPCVGFEV
Sbjct: 197 AIVEDFVRLPAAPPA--QILDEAFYPPVFGVTVLGNSHGFDPSGRTSGYVLWINRRGIMIDPPPFSSSILIANNIPPLMIDGVIVTHCHADHDAGTFQKILQEGRVSLITTS---TIYHSFLRKYSALSGFDESFLKRVLTFRRVRINDPTNIRGATFRFFYSLHSIPCVGFEV 365
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Match: A0A7S3PKR7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PKR7_9STRA) HSP 1 Score: 199 bits (505), Expect = 7.650e-57 Identity = 97/175 (55.43%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 1 RVAVVPMFTLLPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISGSTSGYVLWVNGRGFMIDPPPYASVILQASNIRPALIAGVILTHCHSDHDAGTFQKVLHDGKVNIISTRQERTIYDSFIRKYLALSGLRSSILRQSHKFTPVTIGESLRLHGAVFDFFYTLHSIPCVGFE 525
++A VP +P P P F PP FG T++G+SHGFD GSTSGYVLW+NGRG M+DPPP ++ +LQ ++I P+LI GVI+THCH+DHDAGTFQK+L +G+V +++T TI F+RKY ALSGL+ LR +F PV IGES++ G + FFYTLHSIPCVGFE
Sbjct: 90 KIACVPAEVKIPSPKPMPRVP--RVFHPPAFGVTILGSSHGFDPKGSTSGYVLWLNGRGLMVDPPPNSTYLLQQNSIPPSLIDGVIVTHCHADHDAGTFQKILQEGRVTLMTTE---TIKGCFLRKYSALSGLQQDFLRGCFQFRPVRIGESIKCRGGILRFFYTLHSIPCVGFE 259 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10739.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10739.1.1 >prot_D-mesarthrocarpus_Contig10739.1.1 ID=prot_D-mesarthrocarpus_Contig10739.1.1|Name=mRNA_D-mesarthrocarpus_Contig10739.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=170bp MFTLLPERLPFHPQPTTEAFIPPRFGTTVIGNSHGFDISGSTSGYVLWVNback to top mRNA from alignment at D-mesarthrocarpus_Contig10739:432..2948+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10739.1.1 ID=mRNA_D-mesarthrocarpus_Contig10739.1.1|Name=mRNA_D-mesarthrocarpus_Contig10739.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2517bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10739:432..2948+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10739:432..2948+ >mRNA_D-mesarthrocarpus_Contig10739.1.1 ID=mRNA_D-mesarthrocarpus_Contig10739.1.1|Name=mRNA_D-mesarthrocarpus_Contig10739.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=510bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10739:432..2948+ (Discosporangium mesarthrocarpum MT17_79)back to top |