mRNA_D-mesarthrocarpus_Contig10738.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10738.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10738.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: D7FNE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE0_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 5.880e-52
Identity = 123/309 (39.81%), Postives = 158/309 (51.13%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYL---------------------PQASRGSLGHSPGPRSADARES--RGGAGEELEER-----RVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLRPHRLDRPNQSPMQPSSPTAAGEQGCLGGVVAGEGSSEDDGGVFEASARESGERWLRLASPHHYREGVGAGARMKGI---LPNGSVFAVTAVDPRER 834
            RGPR+ V+   KHC LQD+TF+RPLELRGP   +L  L  +TDPLD       C  G VE  THLYR   FPLGC+APV +LW+P D +                       P+A  G        R+ + RE    GG  + LEER     RVWVWVHPAA  E L EIR+AC   G+PW G  + GPV GGL RLR+RGAR+HE + +VL             Q ++ TAA                   G  +E +ARE+   W  L +     +G G      G+   +P+GSV A+TA+DPR++
Sbjct:   73 RGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEAHTHLYRTNEFPLGCVAPVTVLWAPSDSAATANDEDARTNDRDTDGKNGTSAPEAG-GDXXXXXXXRATEGREEGGTGGTPDGLEERQEDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVL-------------QTAAATAALAPAA--------------GDDYEGAARENAGHWRALGASPAKSDGRGNNNNNNGVPREIPSGSVLAITALDPRQQ 353          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A6H5J7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y8_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.670e-51
Identity = 128/316 (40.51%), Postives = 163/316 (51.58%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDH--SYLPQASRGSLGHSPGPRSADARESR---------------GGAGEELEE-----RRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLRPHRLDRPNQSPMQPSSPTAAGEQGCLGGVVAGEGSSEDDGGVFEASARESGERWLRL-ASPHHYREGVGAGARMKGI---LPNGSVFAVTAVDPRERHPLKQSAVQGRG 870
            RGPR+ V+   KHC LQD+TF+RPLELRGP   +L  L  +TDPLD       C  G VE  THLYR   FPLGC+APV +LW+P D   S   + +R +   + G     A E                 GGA + LEE     RRVW WVHPAA  E L EIR+AC   G+PW G  + GPV GGL RLR+RG R+HE + +VLR       N +P       AAG                     +E +ARE+   W  L ASP   + G        G+   +P+GSV A+TA+DPR++   K  +V+ RG
Sbjct:   73 RGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRANEFPLGCVAPVTVLWAPSDSAASANNEDARKNDHDADGNNGTSAPEXXXXXXXXXXXXXXXXXGGAPDGLEEQEEDVRRVWAWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGTRSHETVQRVLRTAAATAANVAPA-----AAAGVD-------------------YEGAARENAGHWRALGASPA--KSGXXXXXXXXGVPREIPSGSVLAITALDPRQQR--KNGSVRSRG 360          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: UPI0018D7E063 (ribonucleases P/MRP protein subunit POP1-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7E063)

HSP 1 Score: 87.0 bits (214), Expect = 4.390e-15
Identity = 61/193 (31.61%), Postives = 86/193 (44.56%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSY--LPQASRGSLGHSPGPRSADARESRGGAGEELEE---RRVWVWVHPAAYVECLDEIREACA--RLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLR 555
            +  R+    + KHC+LQDV+++R +E+ GP G  L  L  LT P  G  C+      G        YR   FP G + PVN LW     S    P+  RG      GP   + + S    GE+ EE   R++W+W HP+     L E+  A       +   GR  V  +     R RL+G  AH +L   L+
Sbjct:  162 KSVRATYRAMAKHCLLQDVSYLRVIEIVGPQGLTLRALSHLTSPTTGLTCAAASFLTGQRHGEAMFYRMDRFPEGAIGPVNFLWRAHATSADSAPKVGRG------GPTRVEDKASSTSPGEKFEEGAMRQLWLWAHPSCAALLLQEVTAATVAENRNSEANGRVTVRQLDDSPLRFRLQGPLAHPVLLHALK 348          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A8B7Y7J8_ACAPL (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y7J8_ACAPL)

HSP 1 Score: 79.3 bits (194), Expect = 1.590e-12
Identity = 57/186 (30.65%), Postives = 84/186 (45.16%), Query Frame = 1
Query:   10 RSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSP-GPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREA--CARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLR 555
            R+    + +HC+LQDV+++R +E+ GP G  L  L  LT P  G  C+      G        YR   FP G + PV  LW  +  + L  +   + G S  G  +     S GG  EE   R++W+W HP+   E L E++ A       T    R  V  +     R RL+G  +H +L   L+
Sbjct:  164 RATYRAMARHCLLQDVSYLRVVEMSGPQGLTLRALSRLTSPSTGLTCAAAAFLSGQRHGEAVFYRKDQFPQGAIGPVQFLWKAE--ATLADSVPKAKGESQEGCEAGMPAASPGGKFEEKGVRKLWLWAHPSCASELLKELKAASEAENANTDSNSRVTVTQLKDSPLRFRLQGPLSHPVLLHALK 347          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A8K1C644_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C644_PYTOL)

HSP 1 Score: 77.8 bits (190), Expect = 4.930e-12
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 1
Query:   13 SVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAG--RAEVGPVSGGLGRLRLRGARAHEILSQVLRP 558
            + +  L K  V+ D+++   LEL G    ++E L++++DP   +        G  E  + LY    FP+G +APV  +W P    +     + +L  S                 +  +R++W+W+HPAA++E    I EAC  +          E+    G + R++LRG  ++++L+Q+L+P
Sbjct:  176 AALTALRKTAVVHDMSYYGVLELYGRSELIMEALQLVSDPSGSAFEQEDLLSGREEGESVLYNVEQFPMGAIAPVTFMWRPLKSDFDGSTGKFTLSSS----------------WQSTKRQLWLWIHPAAFMEAASAISEACQNVMAERGADETIEILDRRGHVSRIKLRGKTSNDLLTQILKP 343          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A329S154_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S154_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.180e-10
Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
            +   + +  + K   L D ++   +EL G    +LE L++++DP            G  E  + LY  G FP G +APV  +W P    Y                  D+ E +     +  +R++W+WVHPAAY+E    I  AC  +        E+    G L RL+LRG  A E+++ +
Sbjct:  130 KSASAALQAVRKMATLHDSSYYGVIELYGLPQVILEALQLVSDPNGSDFHGLRFLAGSEEGTSMLYHEGQFPQGAIAPVTFMWRPLKRDY------------------DSGEFKLHEDWQNTKRQLWIWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELVASL 294          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: D0NEH1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NEH1_PHYIT)

HSP 1 Score: 71.6 bits (174), Expect = 5.190e-10
Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1
Query:    1 RGPRSV---VDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
            R  +SV   +  + K   L D ++   +EL G    +LE L++++DP            G  E  + LYR G FP G +APV  +W P    Y                  +  E +     +  +R++W+WVHPAAY+E    I  AC  +        E+    G L RL+LRG  A E+++ +
Sbjct:  127 RADKSVSAALQAMRKMATLHDSSYYGVIELFGLPQVILEALQLVSDPNGSDFHGLRFLAGTEEGASMLYREGRFPQGAIAPVTFMWRPLKKDY------------------EGGEFKLHEDWQSTKRQLWLWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELVASL 294          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: UPI0014550F01 (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550F01)

HSP 1 Score: 71.6 bits (174), Expect = 5.380e-10
Identity = 44/154 (28.57%), Postives = 68/154 (44.16%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAG-------EELEERRVWVWVHPAAYVECLDEIREAC 438
            +  R+    L KHC++QD+++++ +E+ G  G  L+ L  LT P  G  C+      G     T LY++  FP G + PVN LW           + G    S  P      +  G          E+   R++WVW HPA     + E++ AC
Sbjct:  159 KSVRATYRALVKHCLIQDISYMKVIEVSGQQGHTLKALSHLTSPSTGLTCAAASYLSGQRHGDTVLYKYDQFPEGALGPVNFLWR----------AEGGFKSSSKPEETTTVDQEGMLSVRKANKLEDSSVRQLWVWAHPACTEVLVKELQTAC 302          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A3M6VHJ7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHJ7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.010e-10
Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 1
Query:   13 SVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
            + ++ L     L D ++   +EL G    +LE L++++DP            G  E  + LY  G FP G +APV  +W P    Y  +  + +L         D + ++         R++W+WVHPAAY+E    I  AC  +G       E+    G L RL+LRG  A E+++ +
Sbjct:  137 AALEALRTKATLHDASYYGIIELYGLPQVILEALQLISDPEGSDFHGRRFLAGAEEGRSMLYHKGQFPQGAIAPVTFMWRPLRQDY--EGGQFTL-------HKDWQNTK---------RQLWLWVHPAAYMEAATAIATACLDVGHDDEESIEMLDRRGQLCRLKLRGRLADELVASI 297          
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A553Q063_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q063_9TELE)

HSP 1 Score: 70.9 bits (172), Expect = 9.670e-10
Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 1
Query:    1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDP-LDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREAC 438
            R     +DT   H VLQDV+++  LELRGP   +L  LR LT     GS  SP    G       LY+   +P G + PV +LW P+      Q + G+ G      +A             EER++W+W+HPA   + L E+ + C
Sbjct:  184 RASYRAMDT---HAVLQDVSYLCCLELRGPEDQILGALRPLTSKHTGGSLLSPRTLSGGFMGSGVLYKADQYPAGALGPVEILWRPRTSK---QTTEGTDGEQATKHAA-------------EERQLWIWLHPALKQDVLGELLKMC 311          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE0_ECTSI5.880e-5239.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7Y8_9PHAE2.670e-5140.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0018D7E0634.390e-1531.61ribonucleases P/MRP protein subunit POP1-like isof... [more]
A0A8B7Y7J8_ACAPL1.590e-1230.65ribonucleases P/MRP protein subunit POP1-like n=1 ... [more]
A0A8K1C644_PYTOL4.930e-1226.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329S154_9STRA2.180e-1027.32Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0NEH1_PHYIT5.190e-1028.49Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
UPI0014550F015.380e-1028.57ribonucleases P/MRP protein subunit POP1-like n=1 ... [more]
A0A3M6VHJ7_9STRA7.010e-1028.49Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A553Q063_9TELE9.670e-1033.33Uncharacterized protein n=1 Tax=Danionella translu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10738contigD-mesarthrocarpus_Contig10738:512..4058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FNE0
Preferred namePOP1
PFAMsPOP1,POPLD
Model size1011
Max annot lvl2759|Eukaryota
KEGG rclassRC00037,RC00094
KEGG koko:K01164,ko:K16794
KEGG ReactionR04452
KEGG Pathwayko00565,ko01100,ko03008,ko03013,map00565,map01100,map03008,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000171,GO:0000172,GO:0000294,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0000956,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005655,GO:0005697,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006379,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016078,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0019439,GO:0022613,GO:0030490,GO:0030677,GO:0030681,GO:0031070,GO:0031974,GO:0031981,GO:0032991,GO:0033967,GO:0034470,GO:0034471,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0034963,GO:0034965,GO:0042254,GO:0042274,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904
Exons3
Evalue9.65e-53
EggNOG OGsKOG3322@1|root,KOG3322@2759|Eukaryota
Ec32 ortholog descriptionRibonuclease P/MRP, subunit POP1
Ec32 orthologEc-22_001370.1
EC3.1.26.5
Descriptionribonuclease MRP activity
Cds size1008
COG categoryD
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789207.3319323-CDS-D-mesarthrocarpus_Contig10738:513..10471680789207.3319323-CDS-D-mesarthrocarpus_Contig10738:513..1047Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10738 514..1047 -
1680789207.3506324-CDS-D-mesarthrocarpus_Contig10738:2233..25071680789207.3506324-CDS-D-mesarthrocarpus_Contig10738:2233..2507Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10738 2234..2507 -
1680789207.3651814-CDS-D-mesarthrocarpus_Contig10738:3858..40581680789207.3651814-CDS-D-mesarthrocarpus_Contig10738:3858..4058Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10738 3859..4058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10738.2.1prot_D-mesarthrocarpus_Contig10738.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10738 514..4058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10738.2.1

>prot_D-mesarthrocarpus_Contig10738.2.1 ID=prot_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=336bp
RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSAC
SPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLG
HSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLG
TPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLRPHRLDRPNQSPMQPS
SPTAAGEQGCLGGVVAGEGSSEDDGGVFEASARESGERWLRLASPHHYRE
GVGAGARMKGILPNGSVFAVTAVDPRERHPLKQSAVQGRGGGNDPSTPSL
GRVAEAGALGEGAPTKDMQGSTGDDGVKATVMMEIT
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mRNA from alignment at D-mesarthrocarpus_Contig10738:512..4058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10738.2.1 ID=mRNA_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3547bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10738:512..4058- (Discosporangium mesarthrocarpum MT17_79)
AGAGGCCCCCGTTCTGTGGTGGACACGCTTTGCAAGCACTGCGTCCTGCA GGATGTCACGTTTGTGAGGCCCCTGGAGCTCCGGGGTCCCTTTGGGGCAC TCCTCGAGGTGCTCCGGGTACTCACAGACCCCCTGGATGGCTCCGCTTGC TCACCGCCCTGCACACAGGGGCTGGTGGAGGTGGTGACTCACCTTTACCG GTGCGGTGGGTGACGGTTGTCAGAGGGTCTCAACTGAACTGGTTTGGGGG GTGGGGGGGGGGCAAGAGCAAGGGAAGGATAGGCAGCACCAGTAAGTGGC CTGGGCCAGGGCGGGGGGTTTGCGCGGGGTAGGGGCGGGGGCGGGAGTTG TGGTTACAATCTAGGAGGTAACTCATCGTCACGCTGGTAGTGTGGTGCAC AGTTCAGTTTATGTTGGCATCACAGTACTACACAAGTAGGACAGTGTCTT GTAATACTGTATTCCAGTACTACAGTGCTGTGTAGTATTTCATTGCGACA GTAAAGTACAGCAATCCAGTAATACAGTGAAATTATAGCATTTCAGTACT GCATGGAAGTATAGTATTTCAATGCTACAGTGAAGTATAGTATTTCAGTA CTGCAGTGCTGTATAGTACTCCAGTACTACAACAAAGTATAGTATTCCAG TACTACAATGAATTATTGTATTTCAGTACTACAGTGAAGGGAAGTATTTC AGTACTGCAGTGCTGTATAATATTTCAGTGCTACAGTGAATTATAATATT TCAGTACTGCAATGAAGTATAGCATTCCAGTACTGCAGACTAGTATTTCA GCACTACAGTGAAGTGAAGTACTTCAGTACTGCAGTGAAGTATAGTATTT CAGCACTGCAGTGCTGTATAGTATTTCAGTACTACAGTGAATTATAGTAT TCCAGTACTGCAATGAAGTATAGTATTCCAGTACAGCAGTCCTGTATTGT ATTTTAGTAGAAGTATTTCAGTACTATGGTAAAGTATAGTAGTCCCAAAA TACAGGGAAAGTATAGCACTTCAGTACTGCAGTGCTGTATAGTATTTCAG TAGAAGTATTTCAGTTCTATAGTAAAGTATCGTAGTCCCGTAATACAGGG AAAGTATAGCATTTCAATACTGCATTGAAGTATAGTATTTCAGTACTGCA GTGCTGTATAGTATTTTAGTACTACAGTGCTGTGTAGTATTTCAGTACTA CTGCAGTGAATTATCGAGGTTCAGTACTGCAGTTCTGTATAGTATTTTAG TACTACAGTGCTCTATGGTACTTCAATACTGTAGCAAGTGTAGCATTGCA GTACTTGGTCATACAAATTACTGCATGGCATTACAGGGCTGTATAGTTAA GGTTAGGGTTAGGGTTGTGGGAAGTGGAAGGAGAAGGGGAAGGTGTGGGC CTCTCCCCATGATGCCATGACTGAATGTGCCTCTGCGTCAATAGTTGCCT TTGTCTGCCACATGCCTACATCCTCCACAAGCACCCTCCCTAATGCACCC CCCCCCCAAACCTAACCACCCCCTACCCCCCTATAATAATGTCTCCCTCA GGTTTGGTTCTTTCCCTCTTGGCTGCATGGCACCTGTCAACCTGCTCTGG AGCCCCCAGGATCATTCTTATCTGCCACAGGCAAGTAGAGGGAGTCTGGG CCACTCCCCTGGCCCCCGTTCTGCAGATGCCAGGGAGTCCAGGGGAGGGG CTGGAGAGGAGCTGGAGGAGAGGAGGGTATGGGTGTGGGTCCACCCGGCT GCATATGTGGAGTGCCTGGACGAGATCAGGGAGGCCTGCGCACGCTTGGG TACGCCATGGGCAGGTCGAGCGGAGGTGGGGGCTGATCATTCCATGAATG GCATGCACAGAATTATGCCCGGGCATTGTGTGAGTGTGTGTGTGGGGGGG GGGGCTATACTACAATCTGTGCGCATATTCCCACAGTACATGGTGAAGTA CATACACAAAGTGTGCAGTGCTGCATGCCCCAAAGAGATTTTGCCCCCGG CAGGACCTTGGTTGGTTGGTAATTTGGTCCTTGTTGGGGGCGGGTGGGTG GGCGGGTGAGGTGGCAAGGGTGACGTGGGTTGGGCGGACGCCTGGGTGCA CAGGAGAGGGTGCTATGATACAGGGAGTCTCTTTTGAGAGATACTTTTTT CTAAGTATATACCGTAGTACTTACTACATTTTTTGGGACACAGACTGATG ATTTTATCACCGGGGTGGGGGTCTCGACCCCCTCTCGCCCCCCTTTTCGT TTTCTTTTCTCTCTCTGTTCCTATGCCTCTATGGACCTACTGTTCTGATA TTAGGGTTAGGGTTAGTTTTCTGCTCGTCACTTGTCGATCGTTTCCACTG CACTGCAAGCGGTGCTGTATGTGTTGTTGTAGTGCGCTGAAAGAAAAGGG CAGAGAAAAGGACATCAAGATTAGACGCCCGAGCCCTAGCGCCCATAACC GTAGCTCTAGAGCCTGTGCAAAACATTCAGCCAAAGAGGGCGCCCACCCC CTTTTTTTTTCTCTCCAAGGCGTGGAGGAGTAGGTAGAATTTGCCACCCT GTTTTTCTCTATTAAATGTTTTTGTCCTCCCCCCCCCCCACCCCCCTTCC CAAGCAGTTGGCTGTGGGCAGGGTCTCTTACATTCGTTCTGTTAATTTGG CCTTGCCAACCTTGTTTTTGGGAAGTAGCATTGGGTTGCCAGCTGTATAC CCTCCCCCCCCTTTAGGCGTATCCCCAACCCCAGGGCTTCTTCGAGCCAC CCTGGAGCACAAAGCACTAGGTGGCAACACACTTTCTGGTGAGAACTGCC ATGAAGAGTACCTCCGAGAGTCTGCCTGATTGGCCTGAATAGAAAGAAAG GACAGGAATAGTGCCTTTGTGCAGGGCCTCCGGCTTACATGACCCCCCAA GAGAGTCACCATGAAGTTTTTGTAAAGTGCTTGTTGAAAAACAGACCCCC CTTCTACCGGCCCCCTCCCCCCCCCCTTCCCCCCCCCCTGCCCTCCTCCC TCGGCCACAAGGTTGGCCCGGTTTCAGGTGGCCTTGGCCGCCTGCGCCTG AGGGGTGCCCGGGCCCACGAGATCCTGTCCCAGGTCCTGCGGCCACACCG ATTGGATCGACCAAACCAATCCCCCATGCAACCCTCCTCTCCCACAGCAG CAGGGGAGCAGGGTTGTCTTGGGGGTGTTGTCGCAGGGGAAGGCTCCTCA GAGGACGATGGGGGGGTATTTGAAGCCTCCGCGAGAGAGAGTGGGGAGCG CTGGCTACGCCTGGCGTCCCCCCACCACTACAGGGAAGGGGTGGGTGCAG GGGCACGGATGAAGGGGATCTTACCCAATGGTTCTGTCTTTGCAGTCACT GCTGTCGATCCGAGGGAAAGGCACCCTCTAAAGCAAAGTGCTGTTCAGGG CAGGGGGGGGGGCAACGACCCGTCAACACCTTCATTGGGGAGAGTAGCCG AGGCAGGCGCCCTGGGGGAGGGGGCTCCAACAAAGGACATGCAGGGAAGC ACAGGTGATGATGGTGTCAAGGCGACAGTTATGATGGAGATAACTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10738:512..4058-

>mRNA_D-mesarthrocarpus_Contig10738.2.1 ID=mRNA_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1008bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10738:512..4058- (Discosporangium mesarthrocarpum MT17_79)
AGAGGCCCCCGTTCTGTGGTGGACACGCTTTGCAAGCACTGCGTCCTGCA
GGATGTCACGTTTGTGAGGCCCCTGGAGCTCCGGGGTCCCTTTGGGGCAC
TCCTCGAGGTGCTCCGGGTACTCACAGACCCCCTGGATGGCTCCGCTTGC
TCACCGCCCTGCACACAGGGGCTGGTGGAGGTGGTGACTCACCTTTACCG
GTTTGGTTCTTTCCCTCTTGGCTGCATGGCACCTGTCAACCTGCTCTGGA
GCCCCCAGGATCATTCTTATCTGCCACAGGCAAGTAGAGGGAGTCTGGGC
CACTCCCCTGGCCCCCGTTCTGCAGATGCCAGGGAGTCCAGGGGAGGGGC
TGGAGAGGAGCTGGAGGAGAGGAGGGTATGGGTGTGGGTCCACCCGGCTG
CATATGTGGAGTGCCTGGACGAGATCAGGGAGGCCTGCGCACGCTTGGGT
ACGCCATGGGCAGGTCGAGCGGAGGTTGGCCCGGTTTCAGGTGGCCTTGG
CCGCCTGCGCCTGAGGGGTGCCCGGGCCCACGAGATCCTGTCCCAGGTCC
TGCGGCCACACCGATTGGATCGACCAAACCAATCCCCCATGCAACCCTCC
TCTCCCACAGCAGCAGGGGAGCAGGGTTGTCTTGGGGGTGTTGTCGCAGG
GGAAGGCTCCTCAGAGGACGATGGGGGGGTATTTGAAGCCTCCGCGAGAG
AGAGTGGGGAGCGCTGGCTACGCCTGGCGTCCCCCCACCACTACAGGGAA
GGGGTGGGTGCAGGGGCACGGATGAAGGGGATCTTACCCAATGGTTCTGT
CTTTGCAGTCACTGCTGTCGATCCGAGGGAAAGGCACCCTCTAAAGCAAA
GTGCTGTTCAGGGCAGGGGGGGGGGCAACGACCCGTCAACACCTTCATTG
GGGAGAGTAGCCGAGGCAGGCGCCCTGGGGGAGGGGGCTCCAACAAAGGA
CATGCAGGGAAGCACAGGTGATGATGGTGTCAAGGCGACAGTTATGATGG
AGATAACT
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