mRNA_D-mesarthrocarpus_Contig10738.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: D7FNE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE0_ECTSI) HSP 1 Score: 194 bits (493), Expect = 5.880e-52 Identity = 123/309 (39.81%), Postives = 158/309 (51.13%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYL---------------------PQASRGSLGHSPGPRSADARES--RGGAGEELEER-----RVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLRPHRLDRPNQSPMQPSSPTAAGEQGCLGGVVAGEGSSEDDGGVFEASARESGERWLRLASPHHYREGVGAGARMKGI---LPNGSVFAVTAVDPRER 834
RGPR+ V+ KHC LQD+TF+RPLELRGP +L L +TDPLD C G VE THLYR FPLGC+APV +LW+P D + P+A G R+ + RE GG + LEER RVWVWVHPAA E L EIR+AC G+PW G + GPV GGL RLR+RGAR+HE + +VL Q ++ TAA G +E +ARE+ W L + +G G G+ +P+GSV A+TA+DPR++
Sbjct: 73 RGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEAHTHLYRTNEFPLGCVAPVTVLWAPSDSAATANDEDARTNDRDTDGKNGTSAPEAG-GDXXXXXXXRATEGREEGGTGGTPDGLEERQEDVRRVWVWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGARSHETVQRVL-------------QTAAATAALAPAA--------------GDDYEGAARENAGHWRALGASPAKSDGRGNNNNNNGVPREIPSGSVLAITALDPRQQ 353
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A6H5J7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y8_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.670e-51 Identity = 128/316 (40.51%), Postives = 163/316 (51.58%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDH--SYLPQASRGSLGHSPGPRSADARESR---------------GGAGEELEE-----RRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLRPHRLDRPNQSPMQPSSPTAAGEQGCLGGVVAGEGSSEDDGGVFEASARESGERWLRL-ASPHHYREGVGAGARMKGI---LPNGSVFAVTAVDPRERHPLKQSAVQGRG 870
RGPR+ V+ KHC LQD+TF+RPLELRGP +L L +TDPLD C G VE THLYR FPLGC+APV +LW+P D S + +R + + G A E GGA + LEE RRVW WVHPAA E L EIR+AC G+PW G + GPV GGL RLR+RG R+HE + +VLR N +P AAG +E +ARE+ W L ASP + G G+ +P+GSV A+TA+DPR++ K +V+ RG
Sbjct: 73 RGPRAAVEAALKHCTLQDLTFMRPLELRGPRWCILGALSAVTDPLDSRPKQQSCVDGFVEARTHLYRANEFPLGCVAPVTVLWAPSDSAASANNEDARKNDHDADGNNGTSAPEXXXXXXXXXXXXXXXXXGGAPDGLEEQEEDVRRVWAWVHPAAAKEALREIRKACDLEGSPWQGCVQAGPVPGGLCRLRVRGTRSHETVQRVLRTAAATAANVAPA-----AAAGVD-------------------YEGAARENAGHWRALGASPA--KSGXXXXXXXXGVPREIPSGSVLAITALDPRQQR--KNGSVRSRG 360
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: UPI0018D7E063 (ribonucleases P/MRP protein subunit POP1-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7E063) HSP 1 Score: 87.0 bits (214), Expect = 4.390e-15 Identity = 61/193 (31.61%), Postives = 86/193 (44.56%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSY--LPQASRGSLGHSPGPRSADARESRGGAGEELEE---RRVWVWVHPAAYVECLDEIREACA--RLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLR 555
+ R+ + KHC+LQDV+++R +E+ GP G L L LT P G C+ G YR FP G + PVN LW S P+ RG GP + + S GE+ EE R++W+W HP+ L E+ A + GR V + R RL+G AH +L L+
Sbjct: 162 KSVRATYRAMAKHCLLQDVSYLRVIEIVGPQGLTLRALSHLTSPTTGLTCAAASFLTGQRHGEAMFYRMDRFPEGAIGPVNFLWRAHATSADSAPKVGRG------GPTRVEDKASSTSPGEKFEEGAMRQLWLWAHPSCAALLLQEVTAATVAENRNSEANGRVTVRQLDDSPLRFRLQGPLAHPVLLHALK 348
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A8B7Y7J8_ACAPL (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y7J8_ACAPL) HSP 1 Score: 79.3 bits (194), Expect = 1.590e-12 Identity = 57/186 (30.65%), Postives = 84/186 (45.16%), Query Frame = 1
Query: 10 RSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSP-GPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREA--CARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQVLR 555
R+ + +HC+LQDV+++R +E+ GP G L L LT P G C+ G YR FP G + PV LW + + L + + G S G + S GG EE R++W+W HP+ E L E++ A T R V + R RL+G +H +L L+
Sbjct: 164 RATYRAMARHCLLQDVSYLRVVEMSGPQGLTLRALSRLTSPSTGLTCAAAAFLSGQRHGEAVFYRKDQFPQGAIGPVQFLWKAE--ATLADSVPKAKGESQEGCEAGMPAASPGGKFEEKGVRKLWLWAHPSCASELLKELKAASEAENANTDSNSRVTVTQLKDSPLRFRLQGPLSHPVLLHALK 347
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A8K1C644_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C644_PYTOL) HSP 1 Score: 77.8 bits (190), Expect = 4.930e-12 Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 1
Query: 13 SVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAG--RAEVGPVSGGLGRLRLRGARAHEILSQVLRP 558
+ + L K V+ D+++ LEL G ++E L++++DP + G E + LY FP+G +APV +W P + + +L S + +R++W+W+HPAA++E I EAC + E+ G + R++LRG ++++L+Q+L+P
Sbjct: 176 AALTALRKTAVVHDMSYYGVLELYGRSELIMEALQLVSDPSGSAFEQEDLLSGREEGESVLYNVEQFPMGAIAPVTFMWRPLKSDFDGSTGKFTLSSS----------------WQSTKRQLWLWIHPAAFMEAASAISEACQNVMAERGADETIEILDRRGHVSRIKLRGKTSNDLLTQILKP 343
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A329S154_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S154_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.180e-10 Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
+ + + + K L D ++ +EL G +LE L++++DP G E + LY G FP G +APV +W P Y D+ E + + +R++W+WVHPAAY+E I AC + E+ G L RL+LRG A E+++ +
Sbjct: 130 KSASAALQAVRKMATLHDSSYYGVIELYGLPQVILEALQLVSDPNGSDFHGLRFLAGSEEGTSMLYHEGQFPQGAIAPVTFMWRPLKRDY------------------DSGEFKLHEDWQNTKRQLWIWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELVASL 294
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: D0NEH1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NEH1_PHYIT) HSP 1 Score: 71.6 bits (174), Expect = 5.190e-10 Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 1
Query: 1 RGPRSV---VDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
R +SV + + K L D ++ +EL G +LE L++++DP G E + LYR G FP G +APV +W P Y + E + + +R++W+WVHPAAY+E I AC + E+ G L RL+LRG A E+++ +
Sbjct: 127 RADKSVSAALQAMRKMATLHDSSYYGVIELFGLPQVILEALQLVSDPNGSDFHGLRFLAGTEEGASMLYREGRFPQGAIAPVTFMWRPLKKDY------------------EGGEFKLHEDWQSTKRQLWLWVHPAAYMEAATAIAAACQEVVAEDEEGIEMHDRRGQLCRLKLRGRLADELVASL 294
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: UPI0014550F01 (ribonucleases P/MRP protein subunit POP1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550F01) HSP 1 Score: 71.6 bits (174), Expect = 5.380e-10 Identity = 44/154 (28.57%), Postives = 68/154 (44.16%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPC-TQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAG-------EELEERRVWVWVHPAAYVECLDEIREAC 438
+ R+ L KHC++QD+++++ +E+ G G L+ L LT P G C+ G T LY++ FP G + PVN LW + G S P + G E+ R++WVW HPA + E++ AC
Sbjct: 159 KSVRATYRALVKHCLIQDISYMKVIEVSGQQGHTLKALSHLTSPSTGLTCAAASYLSGQRHGDTVLYKYDQFPEGALGPVNFLWR----------AEGGFKSSSKPEETTTVDQEGMLSVRKANKLEDSSVRQLWVWAHPACTEVLVKELQTAC 302
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A3M6VHJ7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHJ7_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 7.010e-10 Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 1
Query: 13 SVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREACARLGTPWAGRAEVGPVSGGLGRLRLRGARAHEILSQV 549
+ ++ L L D ++ +EL G +LE L++++DP G E + LY G FP G +APV +W P Y + + +L D + ++ R++W+WVHPAAY+E I AC +G E+ G L RL+LRG A E+++ +
Sbjct: 137 AALEALRTKATLHDASYYGIIELYGLPQVILEALQLISDPEGSDFHGRRFLAGAEEGRSMLYHKGQFPQGAIAPVTFMWRPLRQDY--EGGQFTL-------HKDWQNTK---------RQLWLWVHPAAYMEAATAIATACLDVGHDDEESIEMLDRRGQLCRLKLRGRLADELVASI 297
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Match: A0A553Q063_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q063_9TELE) HSP 1 Score: 70.9 bits (172), Expect = 9.670e-10 Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 1
Query: 1 RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDP-LDGSACSPPCTQGLVEVVTHLYRFGSFPLGCMAPVNLLWSPQDHSYLPQASRGSLGHSPGPRSADARESRGGAGEELEERRVWVWVHPAAYVECLDEIREAC 438
R +DT H VLQDV+++ LELRGP +L LR LT GS SP G LY+ +P G + PV +LW P+ Q + G+ G +A EER++W+W+HPA + L E+ + C
Sbjct: 184 RASYRAMDT---HAVLQDVSYLCCLELRGPEDQILGALRPLTSKHTGGSLLSPRTLSGGFMGSGVLYKADQYPAGALGPVEILWRPRTSK---QTTEGTDGEQATKHAA-------------EERQLWIWLHPALKQDVLGELLKMC 311 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10738.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10738.2.1 >prot_D-mesarthrocarpus_Contig10738.2.1 ID=prot_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=336bp RGPRSVVDTLCKHCVLQDVTFVRPLELRGPFGALLEVLRVLTDPLDGSACback to top mRNA from alignment at D-mesarthrocarpus_Contig10738:512..4058- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10738.2.1 ID=mRNA_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3547bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10738:512..4058- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10738:512..4058- >mRNA_D-mesarthrocarpus_Contig10738.2.1 ID=mRNA_D-mesarthrocarpus_Contig10738.2.1|Name=mRNA_D-mesarthrocarpus_Contig10738.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1008bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10738:512..4058- (Discosporangium mesarthrocarpum MT17_79)back to top |