mRNA_D-mesarthrocarpus_Contig1073.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1073.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1073.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1073.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1073contigD-mesarthrocarpus_Contig1073:5082..7392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2311
Hectar predicted targeting categoryother localisation
Exons1
Cds size2070
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789206.6529915-UTR-D-mesarthrocarpus_Contig1073:5081..53221680789206.6529915-UTR-D-mesarthrocarpus_Contig1073:5081..5322Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1073 5082..5322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789206.6631832-CDS-D-mesarthrocarpus_Contig1073:5322..73921680789206.6631832-CDS-D-mesarthrocarpus_Contig1073:5322..7392Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1073 5323..7392 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1073.2.1prot_D-mesarthrocarpus_Contig1073.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1073 5323..7392 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1073.2.1

>prot_D-mesarthrocarpus_Contig1073.2.1 ID=prot_D-mesarthrocarpus_Contig1073.2.1|Name=mRNA_D-mesarthrocarpus_Contig1073.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=690bp
MRTARSEVDQYEKLDDQDGVEDSVEASGAEISGQNEEQERFSALEVNIRF
GSLELSGPPDKPLESTTEVAAIQGNELSQSSSCLGESRPCDPHGEIFATQ
HASVHEASYFHSLEPLDGETTYNGRNEISQRSTERLSERYDDSDAGILPF
SDGVERDNPPQVMKGDGLGVGAMDDASSSPAHYRHSSESGARRVTPNISA
GVGTRVVHDREVNSPLEADAEADLAGYERALDLAAVAAKFAPRGEVSAGR
EEGGNEPNISESDGGLGRRVDSSVTHQDLGPPGKDSASNGTGGVVEDVPE
QTSTRVPDTTSSTSEPISNPGMTLSTPVLGPSLRDVPDNGRPDMSQTTAG
TREDSPDGRHAGPAAEALEGIFPQGPSGIANLQGEGCGEGDGPGGGAIGC
GIPSVDEGWEEQVAGQGQGLGPGLEILTTGGFVSSGPSSGAGSGGAGGQF
HQQPIGLPPPDNPGGVFGSSASSGGLYTLHLVVTFAVLALVALTKPGPGS
DSVGDGSGRSGYSWPTTRPPRGYGSTSGEGARGGGAGVGERWQHQQPRRR
RKRRHNHSTTHRDSKSGGWGWGWGRALLSAVGEIGPRLRGLTRRLLRVLS
KSWHQIEDTLGARWRLAGNALRLLREAWATLSLRSLPSPHPEANLLATAI
VTPGPFSRRKDIAPGPGGTDEKVSVGESEAVAGRAGGNGG
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mRNA from alignment at D-mesarthrocarpus_Contig1073:5082..7392+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1073.2.1 ID=mRNA_D-mesarthrocarpus_Contig1073.2.1|Name=mRNA_D-mesarthrocarpus_Contig1073.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2311bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1073:5082..7392+ (Discosporangium mesarthrocarpum MT17_79)
CGCAGACGCCTTTCTGGGTCTTGAGGAGTATTGTGTCATTGAAGAAGGGG
GGGCTTGACGGGCGAATTGCCATCTGCGAAGACCAGGGGTGCCAAGGCAC
CCCAGACGGAGTGGGTTAAAGGTCAAGACAAAGCTAGTCGGATTGACATA
CAAAGCCCCGGCGGGGTTTCGGCGGGTTCAGGTCAAGCTTGCACTTCTTC
ACAGCAGTGACCTCTCTCAGCGCAGAAAGAGTAAGCCGAAAATGCGCACT
GCACGATCGGAAGTAGACCAGTATGAGAAACTCGATGATCAAGATGGTGT
TGAAGATTCAGTAGAAGCCAGTGGGGCTGAGATATCTGGCCAGAATGAGG
AGCAAGAGCGATTTTCGGCGTTGGAGGTGAACATTAGATTCGGCTCCTTG
GAGCTTTCTGGGCCTCCTGACAAGCCCCTGGAGTCCACCACCGAGGTGGC
AGCGATCCAGGGTAACGAATTGAGCCAATCAAGTTCTTGCCTAGGAGAAT
CACGGCCGTGCGATCCCCATGGCGAGATCTTCGCCACCCAACATGCCTCG
GTTCATGAAGCTAGTTATTTCCACTCTTTGGAGCCCCTCGACGGCGAAAC
GACCTATAACGGGAGAAACGAGATATCCCAACGCTCTACTGAGAGGTTAT
CTGAAAGGTATGATGATTCAGATGCGGGGATATTGCCTTTCTCTGATGGG
GTGGAGCGGGACAACCCCCCCCAGGTCATGAAGGGAGACGGATTGGGGGT
TGGCGCCATGGATGACGCCTCTAGTAGCCCCGCCCACTACCGCCATAGTT
CGGAGTCAGGCGCTCGAAGGGTCACCCCGAACATATCAGCTGGTGTGGGG
ACACGCGTTGTGCATGATAGGGAGGTCAACTCACCCCTGGAAGCAGATGC
TGAGGCAGACCTGGCAGGTTACGAGAGGGCCCTCGACCTGGCAGCAGTCG
CTGCTAAATTTGCCCCCAGAGGTGAAGTTTCCGCCGGCAGAGAAGAAGGT
GGGAATGAACCCAACATAAGCGAGAGCGACGGGGGGCTTGGGAGGAGAGT
CGACTCATCTGTGACGCACCAGGATTTGGGGCCTCCGGGCAAAGATAGCG
CGTCCAACGGTACGGGCGGCGTGGTGGAGGATGTCCCGGAACAAACCTCT
ACACGCGTGCCCGACACCACCTCTTCAACTTCTGAGCCAATCTCTAACCC
TGGTATGACGTTGTCGACTCCGGTCCTGGGTCCCTCGTTGCGGGATGTGC
CGGACAACGGCCGGCCGGACATGAGTCAAACCACGGCTGGAACCAGAGAA
GATTCACCAGACGGAAGGCATGCTGGGCCGGCCGCGGAGGCTTTAGAGGG
AATTTTCCCTCAAGGTCCTAGTGGCATTGCGAACCTACAAGGGGAAGGCT
GTGGCGAGGGAGATGGGCCAGGGGGTGGGGCTATTGGCTGCGGGATCCCA
TCGGTGGATGAGGGTTGGGAAGAGCAAGTGGCGGGGCAAGGGCAGGGGCT
CGGACCGGGGCTGGAGATCTTAACCACCGGCGGTTTTGTCAGCAGCGGGC
CCTCTAGCGGTGCAGGGAGCGGTGGTGCGGGTGGGCAATTTCACCAGCAG
CCCATTGGACTCCCACCACCTGACAACCCGGGAGGGGTGTTTGGGAGTAG
TGCTAGCTCTGGCGGGCTGTACACGCTCCATCTGGTGGTGACATTTGCTG
TACTGGCCCTCGTTGCGCTCACCAAGCCCGGGCCAGGCAGCGACTCAGTA
GGCGATGGTTCTGGACGCTCCGGCTACAGCTGGCCTACCACAAGGCCACC
TCGCGGCTATGGTTCTACCTCAGGGGAGGGGGCCCGGGGGGGGGGCGCTG
GTGTGGGGGAGCGGTGGCAGCATCAGCAGCCACGGCGGCGGCGGAAGCGG
CGCCACAATCACAGCACCACTCACAGGGACTCGAAATCTGGGGGCTGGGG
CTGGGGTTGGGGGAGGGCCCTGCTCTCTGCAGTGGGTGAGATCGGCCCAC
GGTTGCGGGGGCTGACCCGTCGGTTGTTGCGAGTGCTCTCCAAGTCATGG
CACCAGATCGAAGACACTCTGGGCGCCCGGTGGCGGCTGGCAGGGAATGC
CCTTCGACTGCTCCGGGAGGCATGGGCCACGCTTTCCCTGCGCTCCCTAC
CCAGCCCCCACCCCGAGGCAAACCTACTGGCTACGGCGATCGTCACCCCT
GGGCCGTTCTCACGGCGGAAGGACATTGCTCCAGGGCCTGGGGGCACCGA
CGAGAAAGTGTCAGTGGGGGAGAGCGAGGCTGTGGCGGGGCGGGCTGGGG
GGAATGGAGGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1073:5082..7392+

>mRNA_D-mesarthrocarpus_Contig1073.2.1 ID=mRNA_D-mesarthrocarpus_Contig1073.2.1|Name=mRNA_D-mesarthrocarpus_Contig1073.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2070bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1073:5082..7392+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGCACTGCACGATCGGAAGTAGACCAGTATGAGAAACTCGATGATCA
AGATGGTGTTGAAGATTCAGTAGAAGCCAGTGGGGCTGAGATATCTGGCC
AGAATGAGGAGCAAGAGCGATTTTCGGCGTTGGAGGTGAACATTAGATTC
GGCTCCTTGGAGCTTTCTGGGCCTCCTGACAAGCCCCTGGAGTCCACCAC
CGAGGTGGCAGCGATCCAGGGTAACGAATTGAGCCAATCAAGTTCTTGCC
TAGGAGAATCACGGCCGTGCGATCCCCATGGCGAGATCTTCGCCACCCAA
CATGCCTCGGTTCATGAAGCTAGTTATTTCCACTCTTTGGAGCCCCTCGA
CGGCGAAACGACCTATAACGGGAGAAACGAGATATCCCAACGCTCTACTG
AGAGGTTATCTGAAAGGTATGATGATTCAGATGCGGGGATATTGCCTTTC
TCTGATGGGGTGGAGCGGGACAACCCCCCCCAGGTCATGAAGGGAGACGG
ATTGGGGGTTGGCGCCATGGATGACGCCTCTAGTAGCCCCGCCCACTACC
GCCATAGTTCGGAGTCAGGCGCTCGAAGGGTCACCCCGAACATATCAGCT
GGTGTGGGGACACGCGTTGTGCATGATAGGGAGGTCAACTCACCCCTGGA
AGCAGATGCTGAGGCAGACCTGGCAGGTTACGAGAGGGCCCTCGACCTGG
CAGCAGTCGCTGCTAAATTTGCCCCCAGAGGTGAAGTTTCCGCCGGCAGA
GAAGAAGGTGGGAATGAACCCAACATAAGCGAGAGCGACGGGGGGCTTGG
GAGGAGAGTCGACTCATCTGTGACGCACCAGGATTTGGGGCCTCCGGGCA
AAGATAGCGCGTCCAACGGTACGGGCGGCGTGGTGGAGGATGTCCCGGAA
CAAACCTCTACACGCGTGCCCGACACCACCTCTTCAACTTCTGAGCCAAT
CTCTAACCCTGGTATGACGTTGTCGACTCCGGTCCTGGGTCCCTCGTTGC
GGGATGTGCCGGACAACGGCCGGCCGGACATGAGTCAAACCACGGCTGGA
ACCAGAGAAGATTCACCAGACGGAAGGCATGCTGGGCCGGCCGCGGAGGC
TTTAGAGGGAATTTTCCCTCAAGGTCCTAGTGGCATTGCGAACCTACAAG
GGGAAGGCTGTGGCGAGGGAGATGGGCCAGGGGGTGGGGCTATTGGCTGC
GGGATCCCATCGGTGGATGAGGGTTGGGAAGAGCAAGTGGCGGGGCAAGG
GCAGGGGCTCGGACCGGGGCTGGAGATCTTAACCACCGGCGGTTTTGTCA
GCAGCGGGCCCTCTAGCGGTGCAGGGAGCGGTGGTGCGGGTGGGCAATTT
CACCAGCAGCCCATTGGACTCCCACCACCTGACAACCCGGGAGGGGTGTT
TGGGAGTAGTGCTAGCTCTGGCGGGCTGTACACGCTCCATCTGGTGGTGA
CATTTGCTGTACTGGCCCTCGTTGCGCTCACCAAGCCCGGGCCAGGCAGC
GACTCAGTAGGCGATGGTTCTGGACGCTCCGGCTACAGCTGGCCTACCAC
AAGGCCACCTCGCGGCTATGGTTCTACCTCAGGGGAGGGGGCCCGGGGGG
GGGGCGCTGGTGTGGGGGAGCGGTGGCAGCATCAGCAGCCACGGCGGCGG
CGGAAGCGGCGCCACAATCACAGCACCACTCACAGGGACTCGAAATCTGG
GGGCTGGGGCTGGGGTTGGGGGAGGGCCCTGCTCTCTGCAGTGGGTGAGA
TCGGCCCACGGTTGCGGGGGCTGACCCGTCGGTTGTTGCGAGTGCTCTCC
AAGTCATGGCACCAGATCGAAGACACTCTGGGCGCCCGGTGGCGGCTGGC
AGGGAATGCCCTTCGACTGCTCCGGGAGGCATGGGCCACGCTTTCCCTGC
GCTCCCTACCCAGCCCCCACCCCGAGGCAAACCTACTGGCTACGGCGATC
GTCACCCCTGGGCCGTTCTCACGGCGGAAGGACATTGCTCCAGGGCCTGG
GGGCACCGACGAGAAAGTGTCAGTGGGGGAGAGCGAGGCTGTGGCGGGGC
GGGCTGGGGGGAATGGAGGC
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