mRNA_D-mesarthrocarpus_Contig10724.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10724.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig10724.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10724.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10724contigD-mesarthrocarpus_Contig10724:1765..2102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size338
Hectar predicted targeting categoryother localisation
Exons1
Cds size324
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789206.2687345-CDS-D-mesarthrocarpus_Contig10724:1764..20881680789206.2687345-CDS-D-mesarthrocarpus_Contig10724:1764..2088Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10724 1765..2088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789206.2788234-UTR-D-mesarthrocarpus_Contig10724:2088..21021680789206.2788234-UTR-D-mesarthrocarpus_Contig10724:2088..2102Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10724 2089..2102 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10724.4.1prot_D-mesarthrocarpus_Contig10724.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10724 1765..2088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10724.4.1

>prot_D-mesarthrocarpus_Contig10724.4.1 ID=prot_D-mesarthrocarpus_Contig10724.4.1|Name=mRNA_D-mesarthrocarpus_Contig10724.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=108bp
MRSFAHRACLSSSSSTGTQRVPVAAFLQAVLPIRYIDGHRSYCSSGVGNG
DSRRFNWGAGLVDLHHRDYNCGNGLRLRYQVSTSRRLSGGTPDKDRDEGR
HWTEEIGW
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mRNA from alignment at D-mesarthrocarpus_Contig10724:1765..2102-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10724.4.1 ID=mRNA_D-mesarthrocarpus_Contig10724.4.1|Name=mRNA_D-mesarthrocarpus_Contig10724.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=338bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10724:1765..2102- (Discosporangium mesarthrocarpum MT17_79)
TAGGGTGGGGATCAATGCGATCTTTCGCCCACAGAGCTTGCCTGTCCTCA
TCCTCCTCCACGGGGACTCAGAGGGTTCCTGTCGCAGCCTTCCTCCAGGC
GGTGCTCCCCATCCGTTACATCGATGGTCATCGCAGCTATTGCTCGAGCG
GAGTGGGAAACGGAGATTCGCGACGGTTCAACTGGGGGGCAGGGTTGGTG
GATCTTCACCACAGGGACTACAACTGTGGGAATGGGCTGAGGCTTCGATA
CCAGGTCTCGACGTCCCGCCGGCTGTCAGGGGGTACCCCGGACAAAGACC
GTGACGAGGGAAGACATTGGACGGAAGAAATAGGGTGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10724:1765..2102-

>mRNA_D-mesarthrocarpus_Contig10724.4.1 ID=mRNA_D-mesarthrocarpus_Contig10724.4.1|Name=mRNA_D-mesarthrocarpus_Contig10724.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=324bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10724:1765..2102- (Discosporangium mesarthrocarpum MT17_79)
ATGCGATCTTTCGCCCACAGAGCTTGCCTGTCCTCATCCTCCTCCACGGG
GACTCAGAGGGTTCCTGTCGCAGCCTTCCTCCAGGCGGTGCTCCCCATCC
GTTACATCGATGGTCATCGCAGCTATTGCTCGAGCGGAGTGGGAAACGGA
GATTCGCGACGGTTCAACTGGGGGGCAGGGTTGGTGGATCTTCACCACAG
GGACTACAACTGTGGGAATGGGCTGAGGCTTCGATACCAGGTCTCGACGT
CCCGCCGGCTGTCAGGGGGTACCCCGGACAAAGACCGTGACGAGGGAAGA
CATTGGACGGAAGAAATAGGGTGG
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