mRNA_D-mesarthrocarpus_Contig1072.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A6H5L2P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P5_9PHAE) HSP 1 Score: 322 bits (825), Expect = 1.540e-99 Identity = 174/305 (57.05%), Postives = 214/305 (70.16%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVW-VGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPE-ELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEP-------PKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEY 891
V KIPGL +DYKSLN HINIAEL+ SG+ FR+RWQTER +LEG++C E +EE+I+MQEP + V+RL+CLQSMTD GIKA KYDF KRE+VQTYGY YL+TLNNLE +GLL++RE KVW VG+ D+ SPWP LRRSLRL+NDAV+V PDDI+YVSSGYAPLS RLV ASVRPGWT E +KLLPGP VE+ QDPD P +L A++++A K A + +G G+GG PK+KVM+VY++GGVTYMEIAALRFL+ QR+ +
Sbjct: 389 VKKIPGLKEDYKSLNLHINIAELIMEGSGAPDFRKRWQTERAVLEGEDCSEVIEEMISMQEPAMRVIRLMCLQSMTDAGIKASKYDFLKREVVQTYGYPYLFTLNNLEAVGLLKKRE-KVWGVGAVDTG-SPWPPLRRSLRLVNDAVDVRSPDDIAYVSSGYAPLSVRLVQASVRPGWTTAGEALKLLPGPCVEVTQDPDGPPIDLPTAVRKQAGQRGKSA-------------------------PLDEGSMTVGGGVGGRSXXXXXXXXSPKRKVMLVYFIGGVTYMEIAALRFLNAQREFPF 666
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2DGE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGE7_9STRA) HSP 1 Score: 262 bits (670), Expect = 5.090e-77 Identity = 145/300 (48.33%), Postives = 191/300 (63.67%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEP--PKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
V +IPGL YKSLN+HIN+ E +KR++ AAFR RW TER +LEGD C + +EE+I MQEP L VLRL+CLQS+T+ GI+ K+DF +RE++QTYGYE L+TLNNLE++G++RRRE + W+ SG + W ++RR+L LIN+ V+ PDDI+YVSSGYAPLS RLV +V+PGW+ A T++LLP P +E Q D E+ + R AS S P + D P P KK+M+VYY+GGVT+MEIAALRFLS Q D + I
Sbjct: 366 VKQIPGLTTKYKSLNQHINLTEEIKRTTDGAAFRLRWNTERALLEGDSCLDVMEEMIAMQEPQLSVLRLVCLQSLTNGGIRTAKFDFIRRELIQTYGYELLFTLNNLEKVGMIRRREMQ-WMDSGPT----WSTVRRALALINERVSAVRPDDIAYVSSGYAPLSVRLVQIAVKPGWSAYASTLQLLPRPAMEFTQQSDDDEQQIPNMNRSAS--------------------ERPTGPPPASVPYAPSAPAI------DALPFQPAKKIMVVYYIGGVTFMEIAALRFLSVQPDFPFQI 634
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A1Z9QCA2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QCA2_9BACT) HSP 1 Score: 260 bits (665), Expect = 1.570e-76 Identity = 145/298 (48.66%), Postives = 193/298 (64.77%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
V +IPGL Q+YKSLN+HINI EL+KR++ + FR+RW TERT+LEGD CY+ LEE+I MQ+P +VLRLLCLQS+T+ GIK KYD ++ IVQTYG+ ++ LN LE++G+LRRRE W+ S S W ++R++L LIN+ ++VH PDDISYVSSGYAPLS RLV + + GW + ++LLP P +E QD + P EL+ ALQ+ A +K DS G G + KKKVMMVY++GGVT+MEIAALRFL+ + D + I
Sbjct: 349 VKRIPGLTQNYKSLNQHINITELIKRTTDGSLFRQRWNTERTLLEGDACYDLLEEMIAMQQPANDVLRLLCLQSLTNGGIKYNKYDSLRKAIVQTYGFHMIFALNALEKIGMLRRREM-AWM----DSTSSWTTIRKALGLINENIDVHAPDDISYVSSGYAPLSVRLVEVAAKQGWASQSAALQLLPRPVIEFVQDAE-PSELSHALQQGARAPLK----------------------------ARDSXAGGGASAP-ESPAAKKKVMMVYFIGGVTWMEIAALRFLNSRSDFPFTI 611
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2S0P1_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P1_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.020e-68 Identity = 128/290 (44.14%), Postives = 189/290 (65.17%), Query Frame = 1
Query: 28 QDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
Q+ +SL HI++AELVK+++ + FR+RWQTER+M+E + CY+ LE+LI+MQ+PP +LRLLCLQS+T GIK+ +YD +RE+VQTYGYE+L+ L N E++GLLRRRE+ +W+ + S + SLR+ L+LIN VN +PDD +YVSSGYAP+S RLV A+ + GW E ++ LPG V+++Q D PE+L++AL+R+ ++++ +SE +K V++V+++GGVT+MEIAALRFLSK+ Y I
Sbjct: 1 QNLRSLTNHIHLAELVKQTTEESEFRQRWQTERSMMESESCYDTLEDLISMQDPPYRILRLLCLQSLTSGGIKSSRYDSLRREVVQTYGYEFLFVLQNFEKIGLLRRRET-LWMDTASS----FASLRKMLKLINAEVNTVEPDDFAYVSSGYAPISIRLVQAATQ-GWLGKDELLRELPGRLVDVNQR-DPPEDLSSALKRKPTINL----------------------GTLAKSLVVNSE--------------QKPVLLVFFIGGVTFMEIAALRFLSKRTIFPYQI 247
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2WUT3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUT3_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.030e-66 Identity = 140/314 (44.59%), Postives = 186/314 (59.24%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQR--RASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALVVLISVRSTSIL 939
V +IPGL + Y SLN+HINI E++KR++ S FR RW ER +LE + C + +EELI MQEP VLRL CLQS+T GI+ KY+ KREI+QTYG+E +TLNNLE++GL++RR+ + S SPW SL R+LRLI++ V+V P DISYVSSGYAPLS RLV ++ PGW + L GP E Q +PE+L +AL R R + A SE G G +G P +KKV++VYYVGG+++MEIAALRFL++ + + I + V S L
Sbjct: 372 VKQIPGLKEKYTSLNQHINITEIIKRTTDSVRFRHRWNIERALLEMESCLDLIEELICMQEPVTLVLRLFCLQSLTSGGIRQQKYEHLKREIIQTYGFELAFTLNNLERVGLIKRRDMQFM-----ESGSPWGSLSRTLRLIDERVDVAAPKDISYVSSGYAPLSVRLVQGAIDPGWGAQRPALAQLKGPVFEFTQR-SQPEDLKSALAREERVPFGARAA-----------------------------SERGTGDAMG---SPAEKKVLLVYYVGGISHMEIAALRFLNQTPEFPFRIVMCTTKVVNGASFL 647
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S4QZE6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZE6_9STRA) HSP 1 Score: 223 bits (568), Expect = 3.880e-65 Identity = 135/301 (44.85%), Postives = 187/301 (62.13%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALV 906
V +IP Q+ +SL HI++AELVK+++ ++FR+RWQTER+MLE ++CY+ LE+ I QEPP ++LRLLCLQS+T GIK+ K+D +RE+VQTYGYEYL+ LNNLE+ L RR+++ W+ + S + +LR+ L LIN VN DPDD+SYVSSGYAPL+ARLV + + GWT E ++ LPG +++ Q + PE+ A +L+R G GL P L D KK V++VY+VGGVT MEIAALRFLSK+ + I +
Sbjct: 96 VKQIPIFTQNLRSLTTHIHLAELVKQTTEESSFRQRWQTERSMLESEQCYDMLEDSIACQEPPYQLLRLLCLQSLTSGGIKSAKFDSLRREVVQTYGYEYLFVLNNLEKAKLFRRKDTS-WM----DTASTFTNLRKQLALINAEVNTADPDDVSYVSSGYAPLTARLVQTATQ-GWTGKDEALRELPGRLIDVTQR-EIPEDFATSLKRSVI-----------GPGLA---------------------PLSALATIND---KKKPVLVVYFVGGVTLMEIAALRFLSKRPTFPFSIVCI 354
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: D7G0J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J5_ECTSI) HSP 1 Score: 227 bits (578), Expect = 1.090e-64 Identity = 112/161 (69.57%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVW-VGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSG 483
V KIPGL +DYKSLN HINIAEL+ SG+ FR+RWQTER +LEG++C E +EE+I+MQEP + V+RL+CLQSMTD GIKA KYDF KRE+VQTYGY YL+TLNNLE + LL++RE KVW VG+ D+ SPWPSLRRSLRL+NDAV+V PDDI+YVSSG
Sbjct: 387 VKKIPGLKEDYKSLNLHINIAELIMEGSGAPDFRKRWQTERAVLEGEDCSEVIEEMISMQEPAMRVIRLMCLQSMTDAGIKASKYDFLKREVVQTYGYRYLFTLNNLEAVSLLKKRE-KVWGVGAVDTG-SPWPSLRRSLRLVNDAVDVRSPDDIAYVSSG 545
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA) HSP 1 Score: 233 bits (594), Expect = 2.510e-64 Identity = 144/314 (45.86%), Postives = 184/314 (58.60%), Query Frame = 1
Query: 1 VVYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRE---SKVWVGS-GDSSVSP-------WPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMD-VKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGL---GGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
VV IP L Q YK LN HINIAE +K ++G F++RWQ ER+MLEG+ YE +EE++ EP +VLRLL LQS+T GIKA KY+ KREI+Q+YGYEYL+ L N+EQ GLLR+ + S V GS G SS S W SLRR LRL+ + VN PDDI+YVSSGYAPLS RL+ +PGW ++ K LPGPT+E Q + A L +D + G +G + LGL GG P K VMMVY++GGV++MEIAA+R+LS+ +D Y I
Sbjct: 609 VVKSIPALQQKYKGLNLHINIAEFLKPTTGHVRFQQRWQLERSMLEGETRYEDVEEMVAAYEPVDQVLRLLALQSLTAGGIKASKYELLKREIIQSYGYEYLFALTNMEQAGLLRKADLQLSNVMFGSIGASSFSSTGGSGNAWASLRRLLRLVKENVNTQVPDDIAYVSSGYAPLSVRLLQLIQKPGWASCSDVFKFLPGPTLECTQTQENTRRGGAPLSFMQELDRLLGTACSGTDGDIGGRPQPSVTPVTQH----------LGLSAAETGGKTLPNGKTVMMVYFIGGVSFMEIAAMRYLSRHKDFPYSI 912
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: B7FQ74_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ74_PHATC) HSP 1 Score: 229 bits (583), Expect = 3.440e-64 Identity = 135/291 (46.39%), Postives = 175/291 (60.14%), Query Frame = 1
Query: 4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQ 876
V IP Q+ +SL HI++AELVK++S FR RWQTER MLEG+ CYE LE+L+ Q P + RLLCLQS+ GIK+ +YD +R+IVQTYGYEYL+ L NLE GLL RRE +W+ + SP+ +LR+S+ LIN V+ DPDDISYVSSGYAPLS R++ +V+ GW +E ++ LPG +++ Q + PEEL+AAL+R LG D + KK +MV YVGGVTYMEIAALRFLSK+
Sbjct: 419 VKNIPMFTQNLRSLTNHIHLAELVKKTSEEPLFRERWQTERAMLEGETCYETLEDLVAYQYAPFKFFRLLCLQSLCSNGIKSSRYDALRRDIVQTYGYEYLFVLENLELAGLLSRREG-LWM----DTTSPFNNLRKSVHLINAEVDTVDPDDISYVSSGYAPLSVRILQTAVK-GWNTRSEILRELPGRLIDVIQQ-NPPEELSAALKRPMKK--------------------------------------LGADTDQDTQGKKKPTLMVMYVGGVTYMEIAALRFLSKR 664
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S4QZ45_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZ45_9STRA) HSP 1 Score: 217 bits (552), Expect = 6.370e-64 Identity = 131/290 (45.17%), Postives = 181/290 (62.41%), Query Frame = 1
Query: 37 KSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALV 906
+SL HI++AELVK+++ ++FR+RWQTER+MLE ++CY+ LE+ I QEPP ++LRLLCLQS+T GIK+ K+D +RE+VQTYGYEYL+ LNNLE+ L RR+++ W+ + S + +LR+ L LIN VN DPDD+SYVSSGYAPL+ARLV + + GWT E ++ LPG +++ Q + PE+ A +L+R G GL P L D KK V++VY+VGGVT MEIAALRFLSK+ + I +
Sbjct: 16 RSLTTHIHLAELVKQTTEESSFRQRWQTERSMLESEQCYDMLEDSIACQEPPYQLLRLLCLQSLTSGGIKSAKFDSLRREVVQTYGYEYLFVLNNLEKAKLFRRKDTS-WM----DTASTFTNLRKQLALINAEVNTADPDDVSYVSSGYAPLTARLVQTATQ-GWTGKDEALRELPGRLIDVTQR-EIPEDFATSLKRSVI-----------GPGLA---------------------PLSALATIND---KKKPVLVVYFVGGVTLMEIAALRFLSKRPTFPFSIVCI 263 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1072.1.2 >prot_D-mesarthrocarpus_Contig1072.1.2 ID=prot_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=310bp MLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIback to top mRNA from alignment at D-mesarthrocarpus_Contig1072:459..6949+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1072.1.2 ID=mRNA_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6491bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1072:459..6949+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1072:459..6949+ >mRNA_D-mesarthrocarpus_Contig1072.1.2 ID=mRNA_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=930bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1072:459..6949+ (Discosporangium mesarthrocarpum MT17_79)back to top |