mRNA_D-mesarthrocarpus_Contig1072.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1072.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig1072.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A6H5L2P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P5_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.540e-99
Identity = 174/305 (57.05%), Postives = 214/305 (70.16%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVW-VGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPE-ELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEP-------PKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEY 891
            V KIPGL +DYKSLN HINIAEL+   SG+  FR+RWQTER +LEG++C E +EE+I+MQEP + V+RL+CLQSMTD GIKA KYDF KRE+VQTYGY YL+TLNNLE +GLL++RE KVW VG+ D+  SPWP LRRSLRL+NDAV+V  PDDI+YVSSGYAPLS RLV ASVRPGWT   E +KLLPGP VE+ QDPD P  +L  A++++A    K A                            +    +G G+GG           PK+KVM+VY++GGVTYMEIAALRFL+ QR+  +
Sbjct:  389 VKKIPGLKEDYKSLNLHINIAELIMEGSGAPDFRKRWQTERAVLEGEDCSEVIEEMISMQEPAMRVIRLMCLQSMTDAGIKASKYDFLKREVVQTYGYPYLFTLNNLEAVGLLKKRE-KVWGVGAVDTG-SPWPPLRRSLRLVNDAVDVRSPDDIAYVSSGYAPLSVRLVQASVRPGWTTAGEALKLLPGPCVEVTQDPDGPPIDLPTAVRKQAGQRGKSA-------------------------PLDEGSMTVGGGVGGRSXXXXXXXXSPKRKVMLVYFIGGVTYMEIAALRFLNAQREFPF 666          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2DGE7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGE7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 5.090e-77
Identity = 145/300 (48.33%), Postives = 191/300 (63.67%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEP--PKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
            V +IPGL   YKSLN+HIN+ E +KR++  AAFR RW TER +LEGD C + +EE+I MQEP L VLRL+CLQS+T+ GI+  K+DF +RE++QTYGYE L+TLNNLE++G++RRRE + W+ SG +    W ++RR+L LIN+ V+   PDDI+YVSSGYAPLS RLV  +V+PGW+  A T++LLP P +E  Q  D  E+    + R AS                                   S P +      D  P  P KK+M+VYY+GGVT+MEIAALRFLS Q D  + I
Sbjct:  366 VKQIPGLTTKYKSLNQHINLTEEIKRTTDGAAFRLRWNTERALLEGDSCLDVMEEMIAMQEPQLSVLRLVCLQSLTNGGIRTAKFDFIRRELIQTYGYELLFTLNNLEKVGMIRRREMQ-WMDSGPT----WSTVRRALALINERVSAVRPDDIAYVSSGYAPLSVRLVQIAVKPGWSAYASTLQLLPRPAMEFTQQSDDDEQQIPNMNRSAS--------------------ERPTGPPPASVPYAPSAPAI------DALPFQPAKKIMVVYYIGGVTFMEIAALRFLSVQPDFPFQI 634          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A1Z9QCA2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QCA2_9BACT)

HSP 1 Score: 260 bits (665), Expect = 1.570e-76
Identity = 145/298 (48.66%), Postives = 193/298 (64.77%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
            V +IPGL Q+YKSLN+HINI EL+KR++  + FR+RW TERT+LEGD CY+ LEE+I MQ+P  +VLRLLCLQS+T+ GIK  KYD  ++ IVQTYG+  ++ LN LE++G+LRRRE   W+     S S W ++R++L LIN+ ++VH PDDISYVSSGYAPLS RLV  + + GW   +  ++LLP P +E  QD + P EL+ ALQ+ A   +K                              DS  G G     +    KKKVMMVY++GGVT+MEIAALRFL+ + D  + I
Sbjct:  349 VKRIPGLTQNYKSLNQHINITELIKRTTDGSLFRQRWNTERTLLEGDACYDLLEEMIAMQQPANDVLRLLCLQSLTNGGIKYNKYDSLRKAIVQTYGFHMIFALNALEKIGMLRRREM-AWM----DSTSSWTTIRKALGLINENIDVHAPDDISYVSSGYAPLSVRLVEVAAKQGWASQSAALQLLPRPVIEFVQDAE-PSELSHALQQGARAPLK----------------------------ARDSXAGGGASAP-ESPAAKKKVMMVYFIGGVTWMEIAALRFLNSRSDFPFTI 611          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2S0P1_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0P1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.020e-68
Identity = 128/290 (44.14%), Postives = 189/290 (65.17%), Query Frame = 1
Query:   28 QDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
            Q+ +SL  HI++AELVK+++  + FR+RWQTER+M+E + CY+ LE+LI+MQ+PP  +LRLLCLQS+T  GIK+ +YD  +RE+VQTYGYE+L+ L N E++GLLRRRE+ +W+ +  S    + SLR+ L+LIN  VN  +PDD +YVSSGYAP+S RLV A+ + GW    E ++ LPG  V+++Q  D PE+L++AL+R+ ++++                               +SE              +K V++V+++GGVT+MEIAALRFLSK+    Y I
Sbjct:    1 QNLRSLTNHIHLAELVKQTTEESEFRQRWQTERSMMESESCYDTLEDLISMQDPPYRILRLLCLQSLTSGGIKSSRYDSLRREVVQTYGYEFLFVLQNFEKIGLLRRRET-LWMDTASS----FASLRKMLKLINAEVNTVEPDDFAYVSSGYAPISIRLVQAATQ-GWLGKDELLRELPGRLVDVNQR-DPPEDLSSALKRKPTINL----------------------GTLAKSLVVNSE--------------QKPVLLVFFIGGVTFMEIAALRFLSKRTIFPYQI 247          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S2WUT3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUT3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.030e-66
Identity = 140/314 (44.59%), Postives = 186/314 (59.24%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQR--RASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALVVLISVRSTSIL 939
            V +IPGL + Y SLN+HINI E++KR++ S  FR RW  ER +LE + C + +EELI MQEP   VLRL CLQS+T  GI+  KY+  KREI+QTYG+E  +TLNNLE++GL++RR+ +        S SPW SL R+LRLI++ V+V  P DISYVSSGYAPLS RLV  ++ PGW      +  L GP  E  Q   +PE+L +AL R  R     + A                             SE G G  +G    P +KKV++VYYVGG+++MEIAALRFL++  +  + I +     V   S L
Sbjct:  372 VKQIPGLKEKYTSLNQHINITEIIKRTTDSVRFRHRWNIERALLEMESCLDLIEELICMQEPVTLVLRLFCLQSLTSGGIRQQKYEHLKREIIQTYGFELAFTLNNLERVGLIKRRDMQFM-----ESGSPWGSLSRTLRLIDERVDVAAPKDISYVSSGYAPLSVRLVQGAIDPGWGAQRPALAQLKGPVFEFTQR-SQPEDLKSALAREERVPFGARAA-----------------------------SERGTGDAMG---SPAEKKVLLVYYVGGISHMEIAALRFLNQTPEFPFRIVMCTTKVVNGASFL 647          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S4QZE6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZE6_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.880e-65
Identity = 135/301 (44.85%), Postives = 187/301 (62.13%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALV 906
            V +IP   Q+ +SL  HI++AELVK+++  ++FR+RWQTER+MLE ++CY+ LE+ I  QEPP ++LRLLCLQS+T  GIK+ K+D  +RE+VQTYGYEYL+ LNNLE+  L RR+++  W+     + S + +LR+ L LIN  VN  DPDD+SYVSSGYAPL+ARLV  + + GWT   E ++ LPG  +++ Q  + PE+ A +L+R              G GL                      P   L    D    KK V++VY+VGGVT MEIAALRFLSK+    + I  +
Sbjct:   96 VKQIPIFTQNLRSLTTHIHLAELVKQTTEESSFRQRWQTERSMLESEQCYDMLEDSIACQEPPYQLLRLLCLQSLTSGGIKSAKFDSLRREVVQTYGYEYLFVLNNLEKAKLFRRKDTS-WM----DTASTFTNLRKQLALINAEVNTADPDDVSYVSSGYAPLTARLVQTATQ-GWTGKDEALRELPGRLIDVTQR-EIPEDFATSLKRSVI-----------GPGLA---------------------PLSALATIND---KKKPVLVVYFVGGVTLMEIAALRFLSKRPTFPFSIVCI 354          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: D7G0J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J5_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.090e-64
Identity = 112/161 (69.57%), Postives = 135/161 (83.85%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVW-VGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSG 483
            V KIPGL +DYKSLN HINIAEL+   SG+  FR+RWQTER +LEG++C E +EE+I+MQEP + V+RL+CLQSMTD GIKA KYDF KRE+VQTYGY YL+TLNNLE + LL++RE KVW VG+ D+  SPWPSLRRSLRL+NDAV+V  PDDI+YVSSG
Sbjct:  387 VKKIPGLKEDYKSLNLHINIAELIMEGSGAPDFRKRWQTERAVLEGEDCSEVIEEMISMQEPAMRVIRLMCLQSMTDAGIKASKYDFLKREVVQTYGYRYLFTLNNLEAVSLLKKRE-KVWGVGAVDTG-SPWPSLRRSLRLVNDAVDVRSPDDIAYVSSG 545          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.510e-64
Identity = 144/314 (45.86%), Postives = 184/314 (58.60%), Query Frame = 1
Query:    1 VVYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRE---SKVWVGS-GDSSVSP-------WPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMD-VKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGL---GGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMI 897
            VV  IP L Q YK LN HINIAE +K ++G   F++RWQ ER+MLEG+  YE +EE++   EP  +VLRLL LQS+T  GIKA KY+  KREI+Q+YGYEYL+ L N+EQ GLLR+ +   S V  GS G SS S        W SLRR LRL+ + VN   PDDI+YVSSGYAPLS RL+    +PGW   ++  K LPGPT+E  Q  +      A L     +D +      G    +G +                     LGL     GG   P  K VMMVY++GGV++MEIAA+R+LS+ +D  Y I
Sbjct:  609 VVKSIPALQQKYKGLNLHINIAEFLKPTTGHVRFQQRWQLERSMLEGETRYEDVEEMVAAYEPVDQVLRLLALQSLTAGGIKASKYELLKREIIQSYGYEYLFALTNMEQAGLLRKADLQLSNVMFGSIGASSFSSTGGSGNAWASLRRLLRLVKENVNTQVPDDIAYVSSGYAPLSVRLLQLIQKPGWASCSDVFKFLPGPTLECTQTQENTRRGGAPLSFMQELDRLLGTACSGTDGDIGGRPQPSVTPVTQH----------LGLSAAETGGKTLPNGKTVMMVYFIGGVSFMEIAAMRYLSRHKDFPYSI 912          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: B7FQ74_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ74_PHATC)

HSP 1 Score: 229 bits (583), Expect = 3.440e-64
Identity = 135/291 (46.39%), Postives = 175/291 (60.14%), Query Frame = 1
Query:    4 VYKIPGLNQDYKSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQ 876
            V  IP   Q+ +SL  HI++AELVK++S    FR RWQTER MLEG+ CYE LE+L+  Q  P +  RLLCLQS+   GIK+ +YD  +R+IVQTYGYEYL+ L NLE  GLL RRE  +W+     + SP+ +LR+S+ LIN  V+  DPDDISYVSSGYAPLS R++  +V+ GW   +E ++ LPG  +++ Q  + PEEL+AAL+R                                          LG     D +  KK  +MV YVGGVTYMEIAALRFLSK+
Sbjct:  419 VKNIPMFTQNLRSLTNHIHLAELVKKTSEEPLFRERWQTERAMLEGETCYETLEDLVAYQYAPFKFFRLLCLQSLCSNGIKSSRYDALRRDIVQTYGYEYLFVLENLELAGLLSRREG-LWM----DTTSPFNNLRKSVHLINAEVDTVDPDDISYVSSGYAPLSVRILQTAVK-GWNTRSEILRELPGRLIDVIQQ-NPPEELSAALKRPMKK--------------------------------------LGADTDQDTQGKKKPTLMVMYVGGVTYMEIAALRFLSKR 664          
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Match: A0A7S4QZ45_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZ45_9STRA)

HSP 1 Score: 217 bits (552), Expect = 6.370e-64
Identity = 131/290 (45.17%), Postives = 181/290 (62.41%), Query Frame = 1
Query:   37 KSLNRHINIAELVKRSSGSAAFRRRWQTERTMLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREIVQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLINDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTVEIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQXXXXXXXXXXXXXXXXDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQRDCEYMIALV 906
            +SL  HI++AELVK+++  ++FR+RWQTER+MLE ++CY+ LE+ I  QEPP ++LRLLCLQS+T  GIK+ K+D  +RE+VQTYGYEYL+ LNNLE+  L RR+++  W+     + S + +LR+ L LIN  VN  DPDD+SYVSSGYAPL+ARLV  + + GWT   E ++ LPG  +++ Q  + PE+ A +L+R              G GL                      P   L    D    KK V++VY+VGGVT MEIAALRFLSK+    + I  +
Sbjct:   16 RSLTTHIHLAELVKQTTEESSFRQRWQTERSMLESEQCYDMLEDSIACQEPPYQLLRLLCLQSLTSGGIKSAKFDSLRREVVQTYGYEYLFVLNNLEKAKLFRRKDTS-WM----DTASTFTNLRKQLALINAEVNTADPDDVSYVSSGYAPLTARLVQTATQ-GWTGKDEALRELPGRLIDVTQR-EIPEDFATSLKRSVI-----------GPGLA---------------------PLSALATIND---KKKPVLVVYFVGGVTLMEIAALRFLSKRPTFPFSIVCI 263          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1072.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2P5_9PHAE1.540e-9957.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DGE7_9STRA5.090e-7748.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z9QCA2_9BACT1.570e-7648.66Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]
A0A7S2S0P1_9STRA1.020e-6844.14Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S2WUT3_9STRA1.030e-6644.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4QZE6_9STRA3.880e-6544.85Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D7G0J5_ECTSI1.090e-6469.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D766_9STRA2.510e-6445.86Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
B7FQ74_PHATC3.440e-6446.39Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4QZ45_9STRA6.370e-6445.17Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1072contigD-mesarthrocarpus_Contig1072:459..6949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr42975
PFAMsSec1
Model size1385
Max annot lvl2836|Bacillariophyta
KEGG koko:K20182
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
Exons7
Evalue5.17e-52
EggNOG OGsCOG5158@1|root,KOG1302@2759|Eukaryota,2XDV6@2836|Bacillariophyta
DescriptionBelongs to the STXBP unc-18 SEC1 family
Cds size930
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1072.1.2prot_D-mesarthrocarpus_Contig1072.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1072 588..6623 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789205.8182168-UTR-D-mesarthrocarpus_Contig1072:458..5871680789205.8182168-UTR-D-mesarthrocarpus_Contig1072:458..587Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1072 459..587 +
1680789205.923269-UTR-D-mesarthrocarpus_Contig1072:6623..69491680789205.923269-UTR-D-mesarthrocarpus_Contig1072:6623..6949Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1072 6624..6949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789205.8333015-CDS-D-mesarthrocarpus_Contig1072:587..6141680789205.8333015-CDS-D-mesarthrocarpus_Contig1072:587..614Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 588..614 +
1680789205.8472052-CDS-D-mesarthrocarpus_Contig1072:1533..16621680789205.8472052-CDS-D-mesarthrocarpus_Contig1072:1533..1662Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 1534..1662 +
1680789205.8566399-CDS-D-mesarthrocarpus_Contig1072:2741..28161680789205.8566399-CDS-D-mesarthrocarpus_Contig1072:2741..2816Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 2742..2816 +
1680789205.8683069-CDS-D-mesarthrocarpus_Contig1072:3983..41051680789205.8683069-CDS-D-mesarthrocarpus_Contig1072:3983..4105Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 3984..4105 +
1680789205.880441-CDS-D-mesarthrocarpus_Contig1072:4966..51091680789205.880441-CDS-D-mesarthrocarpus_Contig1072:4966..5109Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 4967..5109 +
1680789205.8968515-CDS-D-mesarthrocarpus_Contig1072:5573..57521680789205.8968515-CDS-D-mesarthrocarpus_Contig1072:5573..5752Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 5574..5752 +
1680789205.9095979-CDS-D-mesarthrocarpus_Contig1072:6368..66231680789205.9095979-CDS-D-mesarthrocarpus_Contig1072:6368..6623Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1072 6369..6623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1072.1.2

>prot_D-mesarthrocarpus_Contig1072.1.2 ID=prot_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=310bp
MLEGDECYEALEELINMQEPPLEVLRLLCLQSMTDVGIKAGKYDFFKREI
VQTYGYEYLYTLNNLEQLGLLRRRESKVWVGSGDSSVSPWPSLRRSLRLI
NDAVNVHDPDDISYVSSGYAPLSARLVVASVRPGWTVLAETMKLLPGPTV
EIDQDPDKPEELAAALQRRASMDVKQALWQGQGRGLGQQGLGQSGGATLG
GTTAGDSEPGLGLGLGGDGEPPKKKVMMVYYVGGVTYMEIAALRFLSKQR
DCEYMIALVVLISVRSTSILLWYFRVQYTSQYTNILSADQQIHINHTNGD
YPHSLLYYN*
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mRNA from alignment at D-mesarthrocarpus_Contig1072:459..6949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1072.1.2 ID=mRNA_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6491bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1072:459..6949+ (Discosporangium mesarthrocarpum MT17_79)
GTGGTCTATAAGATACCAGGCCTGAACCAAGATTACAAGTCCCTCAACAG GCACATCAACATTGCAGAGCTGGTCAAGAGGAGCTCTGGGTCCGCTGCAT TCCGGAGAAGGTGGCAGACAGAGAGGACCATGCTTGAGGGGGATGAATGC TATGAGGTGAAAACCCTAACCCTATAACTTCAAGATGACAAGAGAGTTTT GCTGGCAAAGACTTCATTTAGTAAGTACAGAATTGACTGATTTGATAGGC TTGGATACAACTTTGTGTTGTTGGATGTACTCGGTATTTGCTATATTCAG GATACTATCTCACACTTCTCTCTGCCAAAGCCTTAAATGGGGTGCAAGTC GTATAGTCATCTCTAACCCTAACCCTAGACTTTGTACATTACATTAATTG GGGTGCAAATCATGCAAAGTATGGATCACATGCATAACGCGTCCTTTAAG TAGTTAAAAGTAGTTTTTTTTTTCTTGTTCGAAGTAGGGATTTTTTTTTT TTTATCCCTAAGGGTTAGGGTTAGAGGAATGCCGTGCCTCACCTGTCTTC ATGGTTGCCCAACCGTACAATCTCAGTAACTTGTGCTTTGTGCACTTACC TCTGAAGATGAGGTTTGTTACGATTAATCAATTGCCCTATTCTAGCTGGC TGGAGAAAATTTTGTGAAGGAGAATAAATGATGGGAATTTGCTGTGGCAC TTACTATGGAAAGCCCATCTCTGTTATGAGGTGCTTGTACTTTTGATTGA AAGAAAAGGTATTGTGTATTGAAGTGCATGGTATTTTTAGTCATTTTGGT TCGTTTTCCTGAAGCAGCTTGGTGTGGTGTGTTTGTTGATACTGCTAGTG TTCGGATTAGTGTAAGCGATAATGATCAGCCACTCATGGGATAAACATTC TCATGTAGGCACTCCATGACCCCATCTGTACTTGAATGCTATGTACTTGG ACATGATAAAATAGTGTCGTTGACATGTTGACACTGTGAGGCACTGAAAC TGTTTAGCTGACCAAAATATCAATTACCATGATATCGACTTGGTCAATGT TTTGATTCCCCTCCTTTCTTGTAAGGCGTTGGAGGAACTCATTAACATGC AAGAGCCACCCCTTGAAGTTTTAAGACTCCTGTGTCTACAGAGCATGACG GATGTGGGCATCAAGGCGGGGAAGTACGATTTCTTCAAGAGAGAAATAGT CCAGGCGAGTTAGGGTTAGGGTTGGAGTTTCAGTAGCAGCATGCACCTAC TGGTTCTCCTCACACCCTTTAATTTACCCCCCTTAGCAAGATGCATTTAG AGCTCTATTCAACAGTCGCTGGGCATTACCCCATTTGTCATTTGTCATTT ATAGGCAAGTCAGTTAAACCACAACAAAGAACCCACTTATATAAGATGCT TAATGCCTTACCTTAATCTTTTGTTGACATTAGGGTTAGGGTTGTAACTT TACTTTGGGGCTTCCCTCGCACCGTGTATCCCTCATTAATGCCTTTCTTT TAGCAAACCAGACGATTTTCAGTCATGATTTTAAGTACATTATTGAAGTA TGTTGGAAGTCATTTCCCTCTCTCACCATAGTTCAAAGCATTTCAAATTC GCTCTGCACTACTGTATTTGAAATATACCTTTTGGAGGTACTTGGAAGCA CGTGAGTACCAGGATGGACAGGAGAAGCGATGGGATCCATGTATTAGCTC AGCTCGGTTCTTGTCATCTATAGTCCAAGCTGGTTTGACCTGCATAGAAT CGTATGGGAAGAAAGAAAAATGCCTTAGGGGTAGGGTTAGGGCATATTGT GATTTGTACTTATTGTTAGATCTCTAGCTCTAAGATCTCCATGTGTAGAG TCTACGCCAGATACCACTACGTATGTGGTAGAATGTCATGAGGAGACAGA AACAATGCTCTGGAGCTAAGGGATAAGGATATAGTTAGGGTTAGAGTCAC CACGGTGGAGCAAAAAATATGCAGTCATCTGATTTATTTTAGAGAGTACC AGAACTAGGGCAAAAGCTCTGAACACCTGTACAATATCGCATAACTTTTA ACCCCAACCCTAACCCTAACCCTATTAGATTAAAGGTTATTATTTACATT TGATAATAGACAGCTATGTTACATACACCCAAGTCTCACACATGAAAAAG GAGACCCCTCATAACCCTGTCTGTGCTTTCACCTCCATCCGTAGCCCAGT CTTCCCCTATAACTCTAAAGCTTCATGTTGTACCCTAACCCTAACCCTGG CCACCCCTCCCCATAACTTTGATATTGTGGCAGACATATGGGTATGAGTA CCTGTACACCCTCAACAACCTTGAACAACTGGGCTTGCTACGGAGACGGG AGAGTAAGGTGAGGTCATGAGTTATTTCTGTATGGTGACTGTGTGTGTGC GTGTTTTCTTCTTAGAATAGAGTTAGTGGTAAGGGTAGAGGTGGGGTTAG GCCTTGTCTTGACAACAAAAAATAGATAATTTGGTCATAGAAAGTACAGA GTATTTTTTTTGCAAATATGCCACAACCATTGACTGCAGTATTCATTGTA CCTGTACCTGTTTGTATGGGAACTTTTCTAGATTCTTTCGCTTTGCAAAT TGGGGGAAACTATAGAAGACACACAACGAACACGGATAGAGAAAGGCATG GTGTCCAAGGCCACCCGGGGTGCTTTGGAACACCCCCCATAAGCTGTGCT GGACAAATCATTCTAGATCTTGAAGTGAGGGCCTTGGCTGAGCATGTACT CAGAAGTACTGATGTTCTCACCAACACCAAACAAATTTCTGTGTCAAAAC ATACTTATGGTCCTCTACAACCTGGTTAATCTGTCCAAACATGTGGCCCC TGCCCAGTGCCCTTGTTGTTGGGCCCTGCTATGCCAACAACAATCCTGCC TCAACTTCCTGAGAACCTTGCGTATGATGTGTACGACCCTCTGGCTTGTC AAACGACTCAGAAGTCTGGAAAGACTTTACTGATACCGGTGGCGTCTATG CATGTATCTCCTTATTTTCGCTGTTTTCACTACCTGAGGGGTATGTACTG TTAATAAATAGTACTACACAGGCCAATATATCATAGATTGTTGGTTGTAG ATATAATCAATAGTCTCCTAACTTTTCGTTAAGACCTGCCCTTGGTCTCA TTAGGGTTAGGGTTAGGTTAGTTAGATAGCCAGCACCGAGTTGTCTCCCC CCTTCTGCATTGATACTGCTCTACAGTATTGGGGAGAATCAACTCTCGAA TCTAACCTAATCATTGATACTGCTCTACAGTAGTGGGGAGAATCAACTCT CGAATCTAACCTAATCATTGATACTGCTCTACAGTAGTGGGGAGAATCAA CTCTCGAATCTAACCTAATCCTTGAAGATACCTCAGAATGAAATAATCCC CTTTCATTCCGCATGACACAACATCACACGATACATCACATGTTTATCCT TGCTCTTCCCGTTGTATCCCGGTTGTGTGAACCTTCCCCCATCCCCATAT CATCACGTGACACAACGAAAAAAAGGTGTGGGTAGGATCAGGAGACTCAT CAGTGTCCCCTTGGCCATCCCTTAGGAGATCCCTTCGACTGATCAATGAT GCTGTCAACGTTCATGACCCAGATGACATCTCCTACGTATCCTCTGGGTG AGATACAGTGAGATACACCACTATGCCATTCAAAAGGAAGTGCTGGGGTT AGGGTTAGGGTTAGTGCAAGGTTTGGAGTTCTTTTTGAGGGGGTGCAAGG GGGAGCACAAATCAAAAGGACTACCTAATAAAGATATACCTGAAAAGGTG TACCTTACATAGATGTGATTTGTACTTAGTACTTCACAGCCAAGCACCAA TCGACCACTACAAACTATACTTCAAAGTATAAAATAGCAAGTTTGTTGAA GGTGATCGGGCAGTACATGGATGATCATGCAGTATATGTATTACAAAGTA GTATTTCAAAGTATTATGTTGGGTAATGAATGGGTTCAGCAGCGGTGATG ACAGGGATGGTGATGACAGGGATGGTGATGGCAGTGATGGTGATAGTGAT GTCACATGAGTAGGCTCTATTTTACTTGAAGTAGACTAGGATACTTCAAA ACCTATCTACCGGATAATCTTCAATTTTGAGATATCCAGCTGCAAAATCT CCTGTACAGCACTCCCCCAAAGTACTGCTACCAAAGTACTGCTACCAAAG TACTGCTACCAACACACGCATAACCTCGGCACACAGTCGGCTTACGGTAC CTCTGGTCCTTAGGGTCAACCCTTTGACTGCTGTCCTCCGCATCTTGCAT CATCATCTTTCTATATATATTTCATCAGAGTTGGGGTTGAGGTTAGGTTT ATTTGGTTTGAGGTTAGATCCGGGGTTAGTTTTCTTACCTGGTTCTTTTT ACTTGGATGTACAGTATTCTGGTAGCACTGTAAAAGGTACTCTGAAAGCC TAAGTTTTGTATTTTAACATGTAGCTACCATATTCTGTAACTTTTCGTGC CTTTTCAGGTATGCCCCTCTTTCAGCCCGCCTGGTGGTGGCCTCTGTGCG ACCTGGGTGGACTGTTTTGGCAGAAACCATGAAGCTTCTCCCAGGCCCCA CTGTGGAGATTGACCAAGATCCCGACAAGCCAGAAGAGCTGGCTGCAGCC TGTGAGGGATGAACCAGTGACTTATGCCTTCTTTGTTACTCTAGTGCTTG TTTATTGCTGCAACGTAGAGCTCTAGAGGTTAGTTTTGGGGTTAGGGTCT ACTGGTACCTGTGAAGGACTAGTTTACACATATCGACACATTGCCTTTTT GATTTTAAGCATCATTATCAATTAATCATGTCGTGTCTATGTCTGTTTTT GTGCAAGGAGATTTTACCTGAGTATTTCCCTTGCTGTAGCACTTATTTAC CCGGTACTAGTTATTTACCGTAGACGGTACTGGCAGGGTGTTGGCTGCAA TGACCTTATGATAGCCCACTGCTTCGGAGTAAAGAATCAATAAGTTAGTG TAAGAGTTTTTAAAGAAGCCATCCCCTTTATTCCCCTTATTTGTGTACCA TTACTGTTTGTGTACCATTACTGTGCTGTTCCATGTCAATTTTTTTTTTT TTTTTTTGACTGCAGTACAACGAAGGGCTTCAATGGATGTGAAACAGGCA CTTTGGCAGGGGCAAGGAAGAGGGTTAGGGCAACAAGGACTGGGACAGTC AGGAGGGGCAACGCTTGGTGGGACGACGGCAGGGGATAGTGAGCCAGGGT TAGGGTTAGGGTTAGGGGGAGATGGTGAGCCACCCAAGAAAAAGGTGGGC AGAGCCTGAGGTGATGCATGTGGGAGCACAATCGGAAGGCGTTATGCCTT TCAATCATGCGCCTTAGAGCTCTAATGCGCTTGCTGAGGTACATTTTCGA TGCCCCTGCAGTCACAGCCAGGTCTCTTTATGCTTTCCTTTATGCATGGA TATGAACATGATTTCTGAGGCCGAGGCTCAACCCCCACGTCTGACTTCCT ACGTTGCTGTTTGCAACTGTTGACCGATTTTTTCACATTATTGATGAATA AGGGAGGAGGAGAGAGGCCTTTTCTAGCGCCATTTTCTTTAAATTGTGTG CTTCCTTCACTGATCTTGCGTTTGACCCTCCAGGCGCTAGTCCATTGGAT GTTAGCAATAGTTGGACTTGAAGAATTTGATGATCTTGTTCCCATGCCTG TTTGACATATACCTCCTCAACCCAACCCGCCCCTTGACTATATGCCTTGC CCTGACTAGAGCCTATGCCCCCCGGTTATTTTTATCTTGCATATGACAAA GTACTACAACAGATGATGTACTGATGAGTGGTTGTACATATTACATTTTC TCACCTTGCAGTTTTGCCCTGTCACTTCTCTTCCCACCATTTCTGCTGTA CCTCTTGTAGGTTATGATGGTTTACTACGTGGGAGGAGTGACCTACATGG AGATTGCCGCCTTGCGTTTCCTGTCCAAGCAACGAGACTGTGAGTACATG ATAGCTTTAGTGGTATTGATAAGTGTTAGGAGTACTAGTATACTACTCTG GTATTTCAGGGTACAGTATACATCTCAGTACACCAATATCCTGAGTGCCG ATCAGCAGATACACATCAACCATACCAATGGTGACTATCCACATTCTCTT CTGTACTATAATTAACGGTACAGTAACATCATTGTTTTTGTTCCCCATAC TCTACTGCAAAGAAACGAGTCCAGAGCTCTAGTATACTGTCGATGTTGTT AAAGACAGTTGGAAGCCGAAGTTCATGCATTTCATTTTTCGTTCCACTCC CATGTGGCACGCAAAATGTCTCTTGTGGTATGTTATTCGAGATGTGCTGA TTCTTAGGGCTTCACGTGTGGTTCAATGTTACAACAAGTCAAGAACTCAT GGTGAGGTTTATTCTGCCAATGTATCATAAAGACTGATGTGCCTCCGCCC ACCCATGTCAGTCAATCGAACGAAACCCTTTGCACCAGGCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1072:459..6949+

>mRNA_D-mesarthrocarpus_Contig1072.1.2 ID=mRNA_D-mesarthrocarpus_Contig1072.1.2|Name=mRNA_D-mesarthrocarpus_Contig1072.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=930bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1072:459..6949+ (Discosporangium mesarthrocarpum MT17_79)
ATGCTTGAGGGGGATGAATGCTATGAGGCGTTGGAGGAACTCATTAACAT
GCAAGAGCCACCCCTTGAAGTTTTAAGACTCCTGTGTCTACAGAGCATGA
CGGATGTGGGCATCAAGGCGGGGAAGTACGATTTCTTCAAGAGAGAAATA
GTCCAGACATATGGGTATGAGTACCTGTACACCCTCAACAACCTTGAACA
ACTGGGCTTGCTACGGAGACGGGAGAGTAAGGTGTGGGTAGGATCAGGAG
ACTCATCAGTGTCCCCTTGGCCATCCCTTAGGAGATCCCTTCGACTGATC
AATGATGCTGTCAACGTTCATGACCCAGATGACATCTCCTACGTATCCTC
TGGGTATGCCCCTCTTTCAGCCCGCCTGGTGGTGGCCTCTGTGCGACCTG
GGTGGACTGTTTTGGCAGAAACCATGAAGCTTCTCCCAGGCCCCACTGTG
GAGATTGACCAAGATCCCGACAAGCCAGAAGAGCTGGCTGCAGCCTTACA
ACGAAGGGCTTCAATGGATGTGAAACAGGCACTTTGGCAGGGGCAAGGAA
GAGGGTTAGGGCAACAAGGACTGGGACAGTCAGGAGGGGCAACGCTTGGT
GGGACGACGGCAGGGGATAGTGAGCCAGGGTTAGGGTTAGGGTTAGGGGG
AGATGGTGAGCCACCCAAGAAAAAGGTTATGATGGTTTACTACGTGGGAG
GAGTGACCTACATGGAGATTGCCGCCTTGCGTTTCCTGTCCAAGCAACGA
GACTGTGAGTACATGATAGCTTTAGTGGTATTGATAAGTGTTAGGAGTAC
TAGTATACTACTCTGGTATTTCAGGGTACAGTATACATCTCAGTACACCA
ATATCCTGAGTGCCGATCAGCAGATACACATCAACCATACCAATGGTGAC
TATCCACATTCTCTTCTGTACTATAATTAA
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