mRNA_D-mesarthrocarpus_Contig1071.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1071.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig1071.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A482S551_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S551_9ARCH)

HSP 1 Score: 86.7 bits (213), Expect = 1.110e-16
Identity = 53/136 (38.97%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  181 RVKVGLRVRPAFRDEVERCVHGPLRG-YVPVIEVHHDGIGGDTSSGKDGRAYRGAGRXXXXXGGGETLAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILE 585
            RVKV +R RPAF+DE++       +G +V +++   + +     + KD                   L +V L    G++R F +D  F     Q+ VY+RLA+PIV  VL G  G + AYGQTGTGKTYTMGILE
Sbjct:   36 RVKVAVRCRPAFQDEIDFA-----KGEFVAIVQTKEESL-----ASKD-------------------LGQVSLATISGKQRDFHYDYVFGEDTTQDYVYDRLARPIVNEVLRGVNGTIFAYGQTGTGKTYTMGILE 142          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A6H5KRK0_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK0_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.250e-14
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  181 RVKVGLRVRPAFRDEVERCVHGPLRGYVPVIEVHHDGIGGDTSSGKDGRAYRGAGRXXXXXGGGETLAEVELCLSDGRRRTFGFDLAFRASCGQEEVYER------------LAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILESL 591
            R++VG+R+RP F  EV+        GY P +++   G                                V+L +++GR+R+F FD AF A+C Q E+Y+R            LA P+V+G L G+ GL+MAYGQT +GK+++MG+L  +
Sbjct:   90 RIRVGVRIRPPFVSEVD-YYQKRSGGYRPAVKISRHGC-------------------------------VDL-IANGRQRSFPFDYAFDATCQQRELYQRHVETVARNVNVGLAAPVVDGCLTGFNGLIMAYGQTASGKSHSMGVLRGV 205          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: D8LQH5_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH5_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.290e-13
Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 1
Query:  400 LSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILESL 591
            ++ GR+R+F FD AF A+C Q E+Y+ LA P+V+G L G+ GL+MAYGQT +GK+++MG+L  +
Sbjct:  129 IASGRQRSFPFDYAFDATCQQHELYQSLAAPVVDGCLTGFNGLIMAYGQTASGKSHSMGVLRGV 192          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A090N4D1_OSTTA (Kinesin-like protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4D1_OSTTA)

HSP 1 Score: 74.7 bits (182), Expect = 3.750e-12
Identity = 53/131 (40.46%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  181 RVKVGLRVRPAFRDEVERCVHGPLRGYVPVIEVHHDGIGGDTSSGKDGRAYRGAGRXXXXXGGGETLAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTM 573
            RV+V +RVRPA + E++       R Y   +E   DG   + S+ +  RA    G         E   E     S+G+   F FD  F     QEEVYER A+P V   L GY   V+AYGQTGTGKTYTM
Sbjct:   45 RVEVMIRVRPALKREMDGA-----RRYQRAVEASGDGRRIEASA-RLRRARAEDGDGFLTRRSMEEDIEDGTTTSEGKTNAFDFDGVFDERATQEEVYERSARPAVVNALHGYNATVLAYGQTGTGKTYTM 169          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A183WI55_TRIRE (Kinesin motor domain-containing protein n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183WI55_TRIRE)

HSP 1 Score: 71.6 bits (174), Expect = 7.200e-12
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  376 TLAEVELC-------LSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILESLP 594
            T+ E++ C       L+D   + F FD+ F  S  Q ++Y R+A+PI++ VL GY G ++AYGQTGTGKT+TM  + S+P
Sbjct:   33 TINEIDGCVTLQRTDLADDPPKQFTFDVVFGCSSKQTDIYNRVARPIIDKVLEGYNGTILAYGQTGTGKTFTMEGIRSVP 112          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: F0YNY8_AURAN (Kinesin motor domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNY8_AURAN)

HSP 1 Score: 72.8 bits (177), Expect = 1.450e-11
Identity = 52/144 (36.11%), Postives = 66/144 (45.83%), Query Frame = 1
Query:  184 VKVGLRVRPAFRDEV-----ERCVHGPLRGYVPVIEVHHDGIGGDTSSGKDGRAYRGAGRXXXXXGGGETLAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYG-GLVMAYGQTGTGKTYTMGILESLPG 597
            V+VG+R+RP F DE+     E    G  R  V V+E                                E  A V L L   R R F +D AF     Q +V++ +A P+V+ V AG   G V AYGQTGTGK++TMGILE   G
Sbjct:    6 VRVGVRIRPPFEDEIADELAEEPGGGGWRPAVSVVEAR------------------------------EGQAVVRLELGKKRAREFAYDYAFGPEASQADVFDAVAAPVVDAVAAGGAHGTVFAYGQTGTGKSHTMGILEGPAG 119          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A444D135_ENSVE (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444D135_ENSVE)

HSP 1 Score: 69.7 bits (169), Expect = 1.620e-11
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  379 LAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGIL 582
            L  ++L  ++    ++ FD  F  S  Q  VYE +A+P+VE VL GY G VMAYGQTGTGKTYT+G L
Sbjct:   33 LRRLKLKKNNWSSESYKFDEVFTESASQRRVYEAVAKPVVESVLDGYNGTVMAYGQTGTGKTYTVGRL 100          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: UPI0009F1DC11 (kinesin-like protein KIN-UA isoform X1 n=7 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F1DC11)

HSP 1 Score: 72.4 bits (176), Expect = 2.400e-11
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  379 LAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILE 585
            L  ++L  ++ +  ++ FD  F  S  Q  VYE +A+P+VE VL GY G VMAYGQTGTGKTYT+G LE
Sbjct:   94 LKRLKLRKNNWKSESYRFDEVFTESASQRRVYEAVAKPVVERVLNGYNGTVMAYGQTGTGKTYTIGRLE 162          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A5N6LU01_9ASTR (Kinesin motor domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LU01_9ASTR)

HSP 1 Score: 72.4 bits (176), Expect = 2.440e-11
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  379 LAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGIL 582
            L +++L  ++    ++ FD  F  S  Q+ VYE +A+P+VEGVL GY G +MAYGQTGTGKTYT+G L
Sbjct:  101 LNKLKLKKNNWSSESYKFDEVFTESASQKRVYEAVAKPVVEGVLNGYNGTIMAYGQTGTGKTYTLGKL 168          
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Match: A0A5N6LT88_9ASTR (Kinesin motor domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LT88_9ASTR)

HSP 1 Score: 72.4 bits (176), Expect = 2.510e-11
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  379 LAEVELCLSDGRRRTFGFDLAFRASCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGIL 582
            L +++L  ++    ++ FD  F  S  Q+ VYE +A+P+VEGVL GY G +MAYGQTGTGKTYT+G L
Sbjct:  101 LNKLKLKKNNWSSESYKFDEVFTESASQKRVYEAVAKPVVEGVLNGYNGTIMAYGQTGTGKTYTLGKL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1071.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482S551_9ARCH1.110e-1638.97Kinesin motor domain-containing protein n=1 Tax=ar... [more]
A0A6H5KRK0_9PHAE5.250e-1432.89Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LQH5_ECTSI3.290e-1351.56Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A090N4D1_OSTTA3.750e-1240.46Kinesin-like protein n=2 Tax=Ostreococcus tauri Ta... [more]
A0A183WI55_TRIRE7.200e-1243.75Kinesin motor domain-containing protein n=1 Tax=Tr... [more]
F0YNY8_AURAN1.450e-1136.11Kinesin motor domain-containing protein n=1 Tax=Au... [more]
A0A444D135_ENSVE1.620e-1151.47Kinesin motor domain-containing protein (Fragment)... [more]
UPI0009F1DC112.400e-1152.17kinesin-like protein KIN-UA isoform X1 n=7 Tax=Den... [more]
A0A5N6LU01_9ASTR2.440e-1151.47Kinesin motor domain-containing protein n=1 Tax=Mi... [more]
A0A5N6LT88_9ASTR2.510e-1151.47Kinesin motor domain-containing protein n=1 Tax=Mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1071contigD-mesarthrocarpus_Contig1071:3772..4979 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQH5
PFAMsKinesin,MORN
Model size600
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.46e-17
EggNOG OGsCOG5059@1|root,KOG0244@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size597
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789205.0924785-CDS-D-mesarthrocarpus_Contig1071:3772..38131680789205.0924785-CDS-D-mesarthrocarpus_Contig1071:3772..3813Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1071 3773..3813 -
1680789205.109264-CDS-D-mesarthrocarpus_Contig1071:3993..40701680789205.109264-CDS-D-mesarthrocarpus_Contig1071:3993..4070Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1071 3994..4070 -
1680789205.125605-CDS-D-mesarthrocarpus_Contig1071:4401..48501680789205.125605-CDS-D-mesarthrocarpus_Contig1071:4401..4850Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1071 4402..4850 -
1680789205.1402721-CDS-D-mesarthrocarpus_Contig1071:4949..49791680789205.1402721-CDS-D-mesarthrocarpus_Contig1071:4949..4979Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1071 4950..4979 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1071.4.1prot_D-mesarthrocarpus_Contig1071.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1071 3773..4979 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1071.4.1

>prot_D-mesarthrocarpus_Contig1071.4.1 ID=prot_D-mesarthrocarpus_Contig1071.4.1|Name=mRNA_D-mesarthrocarpus_Contig1071.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=199bp
RSRSLPPLLGGRRRAEREDRVDHRLLRGGDRTRWSPPAPCTATCGTGDGG
ALDFMATCQERVKVGLRVRPAFRDEVERCVHGPLRGYVPVIEVHHDGIGG
DTSSGKDGRAYRGAGRGQGRGGGGETLAEVELCLSDGRRRTFGFDLAFRA
SCGQEEVYERLAQPIVEGVLAGYGGLVMAYGQTGTGKTYTMGILESLPG
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mRNA from alignment at D-mesarthrocarpus_Contig1071:3772..4979-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1071.4.1 ID=mRNA_D-mesarthrocarpus_Contig1071.4.1|Name=mRNA_D-mesarthrocarpus_Contig1071.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1208bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1071:3772..4979- (Discosporangium mesarthrocarpum MT17_79)
CGAAGTCGAAGCTTGCCGCCTTTACTTGGGGTAAGGGATCCTGTCAGATT TTGTCGGCACGCCTTCCTCATTCGTTCTGAGCACCTGCCAACAAAGCGGA AGCTAACGCATTGTCCGATGTCCTCGTAGGGAAGGAGGCGCGCTGAACGT GAGGATCGGGTCGATCATCGACTTCTCAGAGGAGGGGATCGTACACGGTG GTCACCACCAGCACCATGTACTGCAACGTGTGGCACAGGCGATGGGGGTG CGCTTGATTTCATGGCAACTTGCCAAGAAAGAGTGAAAGTTGGTTTGAGG GTGAGACCAGCTTTCCGCGATGAAGTGGAGAGATGCGTACATGGTCCTCT TCGTGGGTACGTGCCGGTGATAGAGGTTCATCACGATGGGATCGGCGGGG ACACGTCAAGTGGGAAGGATGGTCGCGCTTACCGAGGAGCAGGGCGAGGA CAGGGCCGTGGTGGTGGAGGAGAAACGCTTGCTGAGGTGGAGCTGTGTTT ATCTGATGGACGAAGGCGCACATTTGGTTTCGACCTGGCCTTCAGAGCAT CCTGCGGGCAAGAGGAAGTATATGAAAGGTACGACCTGAATTCCTCGAGT GCTTGAAAGAGCTCAACGAGATCAAACGGTGACTCAACAAAGGATTCTCC AGGACACACTGAGTAGAAGGGTGTTATGCTGGGTATTTTGCTGTTGGAAA GTATAGAACATCGTCCGTCAAAAAAAACCCAACCCTTGTGGGTACCACAT TGTAGCTCTACATTAACGTGCCCCGAAAGTAGTTAAAAATAACCGCTGCA CCTTGCGCACGAGTGGGTAAGCTCATTTGAAATATTGGACAATGTTCCCT TTATACTACTTCGAGTACTTCGAAGCAGCCCACAAATATTTTAACATCTT CCCTCTCAGGCTGGCACAGCCCATAGTGGAGGGTGTACTGGCTGGCTATG GAGGTCTGGTGATGGCCTACGGGCAAACAGGCACAGGCAAGGCTGTCCTG CAAAGTTTTCTTGTGGTGTGCATGTTCCGATACTTGTGCCTATCATTTTC CCTGCTTCACAGAGAGTACCCAGCAAGAAAAATTATTTGGTTGAACCCTC ACAGCATGTTATTCTGCACTTGGCGATTGTCACAGCTATAATATACACAC ACATCGCCGTGTTCAGGAAAAACTTACACCATGGGCATCCTGGAAAGCCT GCCAGGAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1071:3772..4979-

>mRNA_D-mesarthrocarpus_Contig1071.4.1 ID=mRNA_D-mesarthrocarpus_Contig1071.4.1|Name=mRNA_D-mesarthrocarpus_Contig1071.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=597bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1071:3772..4979- (Discosporangium mesarthrocarpum MT17_79)
CGAAGTCGAAGCTTGCCGCCTTTACTTGGGGGAAGGAGGCGCGCTGAACG
TGAGGATCGGGTCGATCATCGACTTCTCAGAGGAGGGGATCGTACACGGT
GGTCACCACCAGCACCATGTACTGCAACGTGTGGCACAGGCGATGGGGGT
GCGCTTGATTTCATGGCAACTTGCCAAGAAAGAGTGAAAGTTGGTTTGAG
GGTGAGACCAGCTTTCCGCGATGAAGTGGAGAGATGCGTACATGGTCCTC
TTCGTGGGTACGTGCCGGTGATAGAGGTTCATCACGATGGGATCGGCGGG
GACACGTCAAGTGGGAAGGATGGTCGCGCTTACCGAGGAGCAGGGCGAGG
ACAGGGCCGTGGTGGTGGAGGAGAAACGCTTGCTGAGGTGGAGCTGTGTT
TATCTGATGGACGAAGGCGCACATTTGGTTTCGACCTGGCCTTCAGAGCA
TCCTGCGGGCAAGAGGAAGTATATGAAAGGCTGGCACAGCCCATAGTGGA
GGGTGTACTGGCTGGCTATGGAGGTCTGGTGATGGCCTACGGGCAAACAG
GCACAGGAAAAACTTACACCATGGGCATCCTGGAAAGCCTGCCAGGA
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