mRNA_D-mesarthrocarpus_Contig1071.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: D8LQH5_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH5_ECTSI) HSP 1 Score: 199 bits (505), Expect = 8.730e-56 Identity = 124/204 (60.78%), Postives = 145/204 (71.08%), Query Frame = 1
Query: 1 TLTLGSQAVLLINQGIGQRSTARTTQNDRSSRSHTVLTISLSCH----LAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSE 600
T ++A LIN G+ QR+T+RT +ND SSRSHTVLT+SL H L +T P V+ + R G +KL LVDLAGSER GR GE RL+EAG+IN SLSALGNVVAALGQA DRPHIPFRDSKLTR+LA+SLGG+ANAAL+ATVGPAPQNQAE+LSTL+FASRCMRV+S PVR H +H E
Sbjct: 359 TFHFSTEAAELINLGLQQRTTSRTAKNDISSRSHTVLTVSLDQHGGIGLFSTDPE---TDVANAARQH---AGSRGKSKLMLVDLAGSER-GRTSSIYAGEEPE--ADRLREAGYINQSLSALGNVVAALGQAELDRPHIPFRDSKLTRILADSLGGDANAALVATVGPAPQNQAETLSTLVFASRCMRVQSNPVR--HEEHEE 551
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A6H5KRK0_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK0_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.160e-53 Identity = 121/198 (61.11%), Postives = 141/198 (71.21%), Query Frame = 1
Query: 19 QAVLLINQGIGQRSTARTTQNDRSSRSHTVLTISLS----CHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSE 600
+A LIN G+ QR+T+RTT+ND SSRSHTVLT+SL L +T P V+ G +KL LVDLAGSER GR E + RL+EAG+IN SLSALGNVVAALGQA DRPHIPFRDSKLTR+LA+SLGG+ANAAL+ATVGPAPQNQAE+LSTL+FASRCMRV+S PVR H +H E
Sbjct: 376 KAAELINLGLQQRTTSRTTKNDISSRSHTVLTVSLDQPSGIGLFSTDPEADVADVARQHA------GSRGKSKLVLVDLAGSER-GRTSCIYAAEEPEAV--RLREAGYINQSLSALGNVVAALGQAELDRPHIPFRDSKLTRILADSLGGDANAALVATVGPAPQNQAETLSTLVFASRCMRVQSNPVR--HEEHEE 562
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A7S3GNV4_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GNV4_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.300e-33 Identity = 90/192 (46.88%), Postives = 113/192 (58.85%), Query Frame = 1
Query: 79 NDRSSRSHTVLTISLSCHLAATMP---HGRAEHVSGSTRMRDLWGGDA---------------CTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSE 600
N SSRSHTVLT+++ + + + GS R A +KL +VDLAGSERV R V +GA RL EA IN SLSALGNV+AAL ++ + HIP+RDSKLTR+L +SLGG A ALIATVGPA N E+LSTLLFA+RCM VK++PV+ VD++E
Sbjct: 1 NATSSRSHTVLTLNIEQRITTDVQANNNNTTPSTPGSVRSNSTPNSTAGNSVVSRKSAQYTKTLRSKLLMVDLAGSERVRRT----VSKGA-----RLSEAKSINTSLSALGNVIAALAES--NVSHIPYRDSKLTRLLQDSLGGTARTALIATVGPAAINYGETLSTLLFATRCMSVKTVPVQHAEVDYAE 181
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A6V7L847_9HYME (Kinesin-like protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7L847_9HYME) HSP 1 Score: 129 bits (323), Expect = 2.170e-32 Identity = 89/194 (45.88%), Postives = 112/194 (57.73%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
LI QG +R+ A T N SSRSH VLTISL + G G R +L LVDLAGSER R G C G RLKEA IN SLSALGNV++AL AAG+ H+P+RDSKLTR+L +SLGGNA +IA V P+ N E+LSTL +A+R +K+ P+ ++ D + +LR
Sbjct: 1 LIEQGDKRRALAATKMNATSSRSHAVLTISLEA-----LAMGEESKKPGGAVRR---------GRLNLVDLAGSERQARTGAC---------GDRLKEAASINLSLSALGNVISAL--AAGNGRHVPYRDSKLTRLLKDSLGGNARTLMIACVSPSDDNGEETLSTLRYAARARCIKNKPI--VNEDPKDALLR 167
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A1S3M743_SALSA (Kinesin-like protein n=4 Tax=Salmoninae TaxID=504568 RepID=A0A1S3M743_SALSA) HSP 1 Score: 129 bits (324), Expect = 1.500e-31 Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
L+N G RS T N+ SSRSHT+ I++ C + T P GR +H+ +L LVDLAGSER + G H G RLKEA IN SLSALGNV++AL A G H+P+RDSKLTR+L +SLGGNA ++AT+GPAPQ+ E+L+TL +A+R +K+ P +++ D + +LR
Sbjct: 212 LMNVGNQVRSVGATDMNEHSSRSHTLFLITVEC--SQTGPEGR-QHIR--------------VGRLNLVDLAGSERQAKTG-------VH--GERLKEAAKINLSLSALGNVISAL--ADGRSGHVPYRDSKLTRLLQDSLGGNAKTVMVATLGPAPQHYEETLTTLRYANRAKNIKNQP--RVNEDPKDALLR 375
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A1S3M7C3_SALSA (Kinesin-like protein n=25 Tax=Salmonidae TaxID=8015 RepID=A0A1S3M7C3_SALSA) HSP 1 Score: 129 bits (324), Expect = 2.740e-31 Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
L+N G RS T N+ SSRSHT+ I++ C + T P GR +H+ +L LVDLAGSER + G H G RLKEA IN SLSALGNV++AL A G H+P+RDSKLTR+L +SLGGNA ++AT+GPAPQ+ E+L+TL +A+R +K+ P +++ D + +LR
Sbjct: 212 LMNVGNQVRSVGATDMNEHSSRSHTLFLITVEC--SQTGPEGR-QHIR--------------VGRLNLVDLAGSERQAKTG-------VH--GERLKEAAKINLSLSALGNVISAL--ADGRSGHVPYRDSKLTRLLQDSLGGNAKTVMVATLGPAPQHYEETLTTLRYANRAKNIKNQP--RVNEDPKDALLR 375
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: UPI0011314130 (kinesin-like protein KIF3B n=1 Tax=Oncorhynchus nerka TaxID=8023 RepID=UPI0011314130) HSP 1 Score: 127 bits (319), Expect = 7.960e-31 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
L+N G RS T N+ SSRSHT+ I++ C L P GR +H+ +L LVDLAGSER + G H G RLKEA IN SLSALGNV++AL A G H+P+RDSKLTR+L +SLGGNA ++AT+GPAPQ+ E+L+TL +A+R +++ P +++ D + +LR
Sbjct: 215 LMNLGNQVRSVGATDMNEHSSRSHTLFLITVECSLPG--PDGR-QHIR--------------VGRLNLVDLAGSERQAKTG-------VH--GERLKEAAKINLSLSALGNVISAL--ADGRSGHVPYRDSKLTRLLQDSLGGNAKTVMVATLGPAPQHYEETLTTLRYANRAKNIQNQP--RVNEDPKDALLR 378
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A8J4XB72_CLAMG (Kinesin-like protein n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4XB72_CLAMG) HSP 1 Score: 128 bits (321), Expect = 1.080e-30 Identity = 83/194 (42.78%), Postives = 113/194 (58.25%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
++N G RS T N+RSSRSH + ++++ C P GR H+ C KL LVDLAGSER + G G RLKEA IN SLSALGNVV+AL G H+P+RDSKLTR+L +SLGGNA ++AT+GPA N E+L+TL +A+R +K++P +++ D + +LR
Sbjct: 209 VLNAGNRTRSVGATDMNERSSRSHAIFSVTVECSRPG--PDGR-NHI--------------CVGKLNLVDLAGSERQSKTGA---------RGERLKEATKINLSLSALGNVVSALADGRG--AHVPYRDSKLTRLLRDSLGGNAKTVMVATLGPASFNYDETLTTLRYANRAKNIKNVP--RVNEDPKDALLR 372
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: UPI0018FF1556 (kinesin-like protein KIF3B n=3 Tax=Salmoninae TaxID=504568 RepID=UPI0018FF1556) HSP 1 Score: 127 bits (319), Expect = 1.090e-30 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 1
Query: 31 LINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAALGQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIHVDHSEEMLR 612
L+N G RS T N+ SSRSHT+ I++ C L P GR +H+ +L LVDLAGSER + G H G RLKEA IN SLSALGNV++AL A G H+P+RDSKLTR+L +SLGGNA ++AT+GPAPQ+ E+L+TL +A+R +++ P +++ D + +LR
Sbjct: 215 LMNVGNQVRSVGATDMNEHSSRSHTLFLITVECSLPG--PDGR-QHIR--------------VGRLNLVDLAGSERQAKTG-------VH--GERLKEAAKINLSLSALGNVISAL--ADGRSGHVPYRDSKLTRLLQDSLGGNAKTVMVATLGPAPQHYEETLTTLRYANRAKNIQNQP--RVNEDPKDALLR 378
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Match: A0A6P8YBW7_THRPL (Kinesin-like protein n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YBW7_THRPL) HSP 1 Score: 126 bits (316), Expect = 1.160e-30 Identity = 81/179 (45.25%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 55 RSTARTTQNDRSSRSHTVLTISLSCHLAATMPHGRAEHVSGSTRMRDLWGGDACTAKLQLVDLAGSERVGRLGRCRVGEGAHWLGGRLKEAGFINGSLSALGNVVAAL--GQAAGDRPHIPFRDSKLTRVLAESLGGNANAALIATVGPAPQNQAESLSTLLFASRCMRVKSMPVRKIH 585
R+TA T N+ SSRSH + I++ AA P + + G KL LVDLAGSER +C+ G +G RLKE+ IN SLSALGNV++AL G+A HIP+RDSKLT++L +SLGGN+ A +IA +GPA N ESL TL +ASR +K+MP R ++
Sbjct: 240 RATAATNMNEHSSRSHAIFQITIEMRDAARRPGVKPGQ---GPLTAPVQGSGFRMGKLNLVDLAGSER-----QCKTGA----VGDRLKESSKINLSLSALGNVISALVDGRAGQGHRHIPYRDSKLTQLLQDSLGGNSKAIMIANIGPASYNYDESLMTLRYASRAKHIKNMPTRNVN 406 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1071.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1071.1.1 >prot_D-mesarthrocarpus_Contig1071.1.1 ID=prot_D-mesarthrocarpus_Contig1071.1.1|Name=mRNA_D-mesarthrocarpus_Contig1071.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=205bp TLTLGSQAVLLINQGIGQRSTARTTQNDRSSRSHTVLTISLSCHLAATMPback to top mRNA from alignment at D-mesarthrocarpus_Contig1071:402..2377- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1071.1.1 ID=mRNA_D-mesarthrocarpus_Contig1071.1.1|Name=mRNA_D-mesarthrocarpus_Contig1071.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1976bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1071:402..2377- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1071:402..2377- >mRNA_D-mesarthrocarpus_Contig1071.1.1 ID=mRNA_D-mesarthrocarpus_Contig1071.1.1|Name=mRNA_D-mesarthrocarpus_Contig1071.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=615bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1071:402..2377- (Discosporangium mesarthrocarpum MT17_79)back to top |