mRNA_D-mesarthrocarpus_Contig10707.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: D7FTL8_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL8_ECTSI) HSP 1 Score: 195 bits (496), Expect = 2.610e-52 Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 1
Query: 580 ERPFMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLG--ETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVK 969
E FMDRAF NEM LIN TD A+ +MMWREGLHSGFF+MQLLRD YRDWC KT T +HK LILRF+ Q ++LAP+CPH++EH W LLG E+GSVLK WP+ G VDGWMSRSFQFL+KTL++FRL+ K
Sbjct: 840 EYVFMDRAFRNEMDALINKTDDAYGRMMWREGLHSGFFAMQLLRDFYRDWCLKTSTLMHKTLILRFMEVQILLLAPMCPHYAEHFWGLLGHGESGSVLKASWPQTGEVDGWMSRSFQFLSKTLKAFRLTAQK 971
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A835YRC2_9STRA (Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC2_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.060e-43 Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWA-LLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVK 969
FMDRAF+NEM LI T+ +++MMWREGL GFF MQLLRDSYRDWC++TGT +H L RFI QT++LAPICPHF E +W LLG+TGSVL+ WP AG VD W S +F FL K+LR+FR ++ K
Sbjct: 798 FMDRAFDNEMNRLIAKTEDNYTRMMWREGLQGGFFEMQLLRDSYRDWCSRTGTAMHAGLTTRFIEVQTVILAPICPHFCEFVWGELLGKTGSVLRAGWPAAGAVDVWTSSAFLFLQKSLRNFRNTVGK 925
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A2D4C4N6_PYTIN (Leucine--tRNA ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4N6_PYTIN) HSP 1 Score: 152 bits (385), Expect = 1.590e-37 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVKVRAR 981
F D+ F ++M IN T F +M WREGLH+GFF Q+ RDSYRD C+++ TP+H+E+I RF+ AQTIMLAPI PHF EH+W LLG+TG V RWP+A VD + R+ FL+KT+RSFR +L K A+
Sbjct: 813 FTDQVFMHQMSHYINETAKFFDRMQWREGLHTGFFEFQIARDSYRDICSRSETPMHREVIERFLEAQTIMLAPITPHFCEHLWKLLGKTGFVSTARWPQAFEVDYSLLRAADFLSKTMRSFREALTKGNAK 943
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A7S2UUA3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUA3_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.580e-33 Identity = 60/136 (44.12%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 580 ERPFMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSV-LKTRWPEAGG-VDGWMSRSFQFLTKTLRSFRLSLVKVRAR 981
E FMDRAF NEM L+ T +S+M+WR+GLHSG+F Q++RD++RDWC ++ P+ ++L+ +I QT+M+APICPH++E+IW +LG+ + + RWPE VD ++R++ F TL++FR S K + +
Sbjct: 37 EEHFMDRAFRNEMARLMQITRANYSKMLWRDGLHSGWFEFQIIRDAWRDWCKQSSIPMREDLVFEYIETQTLMIAPICPHYAENIWQILGKGERMAVGGRWPEPKAEVDKILARAYGFFKTTLKNFRNSKGKAKGK 172
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A5D6XV62_9STRA (Leucine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV62_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.230e-32 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVK 969
F D+ F ++M LI T + + WREGLH GFF Q+ RD+YRD C ++ +H+++I RF+ AQT+ML+PI PH+ EHIWALLG+ G V RWPE VD + R+ FL KT+RSFR +L K
Sbjct: 805 FNDQVFMHQMSHLIGETAKFYDVLQWREGLHVGFFEFQIARDTYRDICVRSNVAMHRDVIARFMEAQTVMLSPITPHYCEHIWALLGKPGFVSAARWPEVFDVDFALLRAGDFLNKTVRSFREALAK 931
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A024GMT2_9STRA (Leucine--tRNA ligase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMT2_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.930e-31 Identity = 62/125 (49.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 580 ERPFMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFR 954
E F DR F N+M LI T F ++ WREGLH+G+F QL RD+YRD CT+ +H +++ R++ AQTIML+PICPHF EHIW+++G +G V T WP VD + R+ FL KT+R FR
Sbjct: 801 EYSFNDRMFLNQMNDLILKTKNFFDRLQWREGLHTGYFEFQLARDAYRDLCTRGEIAMHSKVLDRYVNAQTIMLSPICPHFCEHIWSIMGNSGFVSTTSWPIVDSVDHSLLRAGDFLGKTIRHFR 925
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A067C0W4_SAPPC (Leucine--tRNA ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0W4_SAPPC) HSP 1 Score: 134 bits (338), Expect = 2.590e-31 Identity = 64/127 (50.39%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVK 969
F DR F +M +I T F M WR+G + FF +Q+ RDSYRD CT+ G VHK++I RFI AQTIMLAPICPH EH W LLG+ G V WP A +D + R+ FLTK+L+ FR +++K
Sbjct: 788 FNDRMFNAQMDDIITRTASHFDAMQWRDGFQASFFELQIARDSYRDVCTRGGFGVHKDVIFRFIEAQTIMLAPICPHICEHFWTLLGKQGFVADALWPTAAPLDYNLLRAGDFLTKSLKHFRDAVLK 914
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A8K1FLA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLA1_PYTOL) HSP 1 Score: 134 bits (336), Expect = 4.790e-31 Identity = 64/130 (49.23%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 580 ERPFMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFRLSLVK 969
E F DR F ++M LIN T +M WREGLH+GFF Q+ RD YRD C ++ +H+++I RF+ AQTIML+P+ PHF EHIW LLG+ G V WP+ VD + R+ FL KT R FR +L K
Sbjct: 802 ELTFNDRVFMHQMSHLINETAKFNDRMQWREGLHTGFFEFQIARDGYRDICARSEVAMHRDVITRFMEAQTIMLSPVTPHFCEHIWKLLGKDGFVATALWPQTEEVDFSLLRAGDFLGKTARHFREALTK 931
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: F0W1F3_9STRA (Leucine--tRNA ligase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1F3_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.430e-30 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGGVDGWMSRSFQFLTKTLRSFR 954
F DR N+M LI T F ++ WREGLH+G+F QL RD+YRD C++ P+H +++ R+I AQ IML+PICPHF EHIW+L+G +G V WP VD + R+ FL KT+R FR
Sbjct: 804 FNDRMLANQMNDLIIKTKSFFDRLQWREGLHTGYFEFQLARDAYRDLCSRGEIPMHSKVLDRYIHAQIIMLSPICPHFCEHIWSLMGNSGFVSTASWPAVDIVDQSLLRAGDFLGKTIRHFR 925
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Match: A0A024U1C5_9STRA (Leucine--tRNA ligase n=15 Tax=Aphanomyces TaxID=100860 RepID=A0A024U1C5_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.350e-29 Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 589 FMDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTGTPVHKELILRFIRAQTIMLAPICPHFSEHIWALLGETGSVLKTRWPEAGG-VDGWMSRSFQFLTKTLRSFRLSLVK 969
F D+ F +M +I TT F M WR+G + FF +Q+ RD+YRD CT+ +HK++I+RFI AQTIMLAPICPH EH W LLG+ G V WP G D + R+ FLTK+L+ FR +++K
Sbjct: 801 FNDKMFHAQMDEIITTTAAHFDAMQWRDGFQTSFFELQIARDAYRDICTRGEFGLHKDVIVRFIEAQTIMLAPICPHICEHFWKLLGKPGFVSNAAWPAVTGPTDYTLLRAGDFLTKSLKHFRDAVMK 928 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10707.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10707.3.1 >prot_D-mesarthrocarpus_Contig10707.3.1 ID=prot_D-mesarthrocarpus_Contig10707.3.1|Name=mRNA_D-mesarthrocarpus_Contig10707.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=131bp MDRAFENEMKVLINTTDVAFSQMMWREGLHSGFFSMQLLRDSYRDWCTKTback to top mRNA from alignment at D-mesarthrocarpus_Contig10707:1735..3713+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10707.3.1 ID=mRNA_D-mesarthrocarpus_Contig10707.3.1|Name=mRNA_D-mesarthrocarpus_Contig10707.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1979bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10707:1735..3713+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10707:1735..3713+ >mRNA_D-mesarthrocarpus_Contig10707.3.1 ID=mRNA_D-mesarthrocarpus_Contig10707.3.1|Name=mRNA_D-mesarthrocarpus_Contig10707.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=393bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10707:1735..3713+ (Discosporangium mesarthrocarpum MT17_79)back to top |