mRNA_D-mesarthrocarpus_Contig1069.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA) HSP 1 Score: 273 bits (698), Expect = 6.360e-81 Identity = 135/241 (56.02%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 535 RRDWTSTVPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
++ W N+ G P E MTRYPSL + GGLLRSLDYLGT +FA GAI AG GM+L+GC+ + VITA+GGGTTRD+L+GQTPVFW++EVEYL +C+VT++A Y WP L ++S+ G DG R LDTIGLGAF+VVG+QHGIR+ HP T+VIA ITC GG+ RDV+TKAP+ VM +AELYA+ AA GS YL AR DPL+R+ G T+ R +WT L+LP
Sbjct: 27 KKAWLKIKNANQ-GDLPRESMTRYPSLRSAGGLLRSLDYLGTVAFATGGAICAGRAGMDLLGCIEIGVITAMGGGTTRDLLLGQTPVFWLQEVEYLAMCIVTSIATFYAWPHLRHMPILSASGSS-DDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLP 265
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6H5JCP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP2_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.630e-58 Identity = 125/336 (37.20%), Postives = 169/336 (50.30%), Query Frame = 1
Query: 562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEV--------------------------------------------------------------------------------------------------------EYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
VNRR + E ++RYP+ ++PGGL+R LDY+GT SFA SGA TAG+RGMNL+GC+ V V+ A GGGT RD+L+GQTPVFW+ EV EY+ ICVVTA+ LWP LSR +++S G + DG S+ +DT+GL +F+V +Q+GIR+ HP TIVI ITC GGGI+RDVLT +PV + +A++Y S AA+GS YL AR DPL R+ +G T +++R+L+ Y L+LP
Sbjct: 93 VNRRAIPTPEALSRYPNFKSPGGLVRFLDYVGTVSFAMSGAATAGMRGMNLLGCIFVGVLAATGGGTVRDLLLGQTPVFWLVEVGVRGAWIVLFFCGAGDLVGRSLCPTSPCAFLRFLACLDAWVELALRRFCSVDGGVGCLPSLALLFLIGRIWRCLLMFVLRHSSVVWPVAVLLSWTPLLLPLSQVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGL-DGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAIGSGAYLLARRYSKDPLFRICVGFFTVIILRLLACLYDLRLP 427
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A5J4Z897_PORPP (UPF0126 membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z897_PORPP) HSP 1 Score: 207 bits (528), Expect = 8.280e-56 Identity = 103/223 (46.19%), Postives = 148/223 (66.37%), Query Frame = 1
Query: 589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
+ M RYP L +PGG LR+ DY+GT+ FA +GA+TA GM+++GC +V ITA+GGGTTRD+LMG PVFW+ E EY+ I V T+L A + WP VS G D F ++D+ LGAFS +G+ +GIR G++P + +V AV+TC GG++RD K PV V+ AE+YA+ AA+GS Y+ AR ++R+ +G+S+T +MR+ + YG +LP
Sbjct: 122 DSMPRYPDL-SPGGFLRAFDYIGTSIFALTGALTAASGGMDVLGCTVVGTITAVGGGTTRDLLMGARPVFWLIESEYIAIAVATSLLAFFFWPD------VSDALGITEDEYFINVIDSWSLGAFSCIGTMNGIRAGYNPLIVLVCAVVTCTFGGVVRDTFLKRPVRVLHSYAEIYATTAAVGSIAYMAARAMQLPLVLRISLGLSSTFIMRLWAMKYGTRLP 337
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: D8LE41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI) HSP 1 Score: 203 bits (517), Expect = 6.330e-55 Identity = 98/232 (42.24%), Postives = 146/232 (62.93%), Query Frame = 1
Query: 562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
+NR P +G+TRYP+ +P G+LR LDYLGT FA SG +TAG GM+L+GC++V ITA GGGT RDVL+G TPVFWM E EYL +C+ T + +LW +L+ G D +D +G+GAF +G+Q G+RKG + + ++T GG+IRDVL P ++ + E+YAS A LGS++Y+ + P++R++ G + + +RVL++T ++LP
Sbjct: 61 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAE-------RGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 285
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6H5JGY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY7_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.100e-53 Identity = 97/232 (41.81%), Postives = 147/232 (63.36%), Query Frame = 1
Query: 562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
+NR P +G+TRYP+ +P G+LR LDYLGT FA SG +TAG GM+L+GC++V ITA GGGT RD+L+G TPVFWM E EYL +C+ T++ +LW +L+ G D +D +G+GAF +G+Q G+RKG + + ++T GG+IRDVL P ++ + E+YAS A LGS++Y+ + P++R++ G + + +RVL++T ++LP
Sbjct: 143 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGHVGMDLLGCIIVGTITATGGGTVRDMLLGNTPVFWMHETEYLWMCLATSVGVFFLWSYLAE-------RGVRNDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 367
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A836CDZ5_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.470e-50 Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 1
Query: 589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
+G+TRYPSL +P G+LR LD GT FA+SG +TAG GM+L+GC +V ITA+GGGT RD+L+G TPVFWM E EYL IC+ A+ + + L+ G D + D +G+GAF V+G+Q+ +R+ + + + T GG+IRDVL + P ++ +AE+YAS A +G+ Y+ R P++R+ G +R+ +W L+LP
Sbjct: 22 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAE-------QGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLP 237
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A7S1TDV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD) HSP 1 Score: 186 bits (471), Expect = 8.270e-50 Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 1
Query: 589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
+GM R+P+ GGLLR LDY GT FAFSG + A GM+L+GC +V ITA+GGGT RD+ +G PVFWM E EYL +C++T+ + LWP L+R + SS ++ D GL AF V+G+Q+GIR G P +++V ++T GG+IRDVL + P ++ +AE+YAS AA+G++ Y+ A R+ +G+ + R+ ++TY ++LP
Sbjct: 6 DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKV-----ELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLP 222
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6T5MA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MA33_HETAK) HSP 1 Score: 188 bits (478), Expect = 1.570e-49 Identity = 99/253 (39.13%), Postives = 149/253 (58.89%), Query Frame = 1
Query: 523 KGWYR-RDWTST------VPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLPH 1260
KGW++ + + ST P + +GM R+PS GGLLR LDY GT FA G++TAG+ GM+L+GC +V +TA+GGGT RD+L+G PVFWM E EY+ + + A A + W +L + + D R D G+GAFSV+G+Q+G+R G HP + +V +IT GG+IRDVL + P ++ +E+YA+ A +G++ Y AR P ++ +G S + R +WTY ++LP+
Sbjct: 75 KGWFQPKRFNSTNKPPAEAPPAAKPPVHTDGMPRFPSTSA-GGLLRGLDYFGTVVFALGGSVTAGLAGMDLLGCTIVGTVTAVGGGTVRDLLLGNFPVFWMLETEYVLLSLACAWAGFFGWDYLHEHWHLEE------NSDILRWWDACGVGAFSVIGAQNGLRAGLHPAVAVVCGMITATFGGMIRDVLCQKPPRILHSQSEVYATTALIGAAAYTAARSL--PPAAKIGLGFSAAVASRYAAWTYDIRLPN 318
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A7S1XFC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD) HSP 1 Score: 187 bits (474), Expect = 4.500e-49 Identity = 106/277 (38.27%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 439 GVAVEGWRVEERDGAP----LASVDFQVETTSKGWYRRDWTSTVPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
G++ WR + D AP L + T G +R +S+ V +GM R+P+ GGLLR LDY GT FAFSG + A GM+L+GC +V ITA+GGGT RD+ +G PVFWM E EYL +C++T+ + LWP L+R + SS ++ D GL AF V+G+Q+GIR G P +++V ++T GG+IRDVL + P ++ +AE+YAS AA+G++ Y+ A R+ +G+ + R+ ++TY ++LP
Sbjct: 51 GISQRVWR-DLHDDAPSRRYLQHYRLRGRTLGPGLPKRYSSSSSMV--------DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKV-----ELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLP 312
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A0S4JKV7_BODSA (Uncharacterized protein n=2 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JKV7_BODSA) HSP 1 Score: 181 bits (459), Expect = 5.200e-48 Identity = 98/222 (44.14%), Postives = 137/222 (61.71%), Query Frame = 1
Query: 589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLL-DTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLK 1251
EGM RYP+L G L R LDY GT FA SG+I A + GM+ +GCV+V ITA+GGGT RDV+ G++P FW++E EYL + + A AA + F PG ++ + F DT+G+GAF+V+G+ + +R GF +T+V ITC GGG+IRD L K PV VM E+YA AA G + YL AR +R+++G TT+ +R+L+ Y +K
Sbjct: 17 EGMPRYPNLSVLGAL-RGLDYAGTMIFAVSGSILASMYGMDGLGCVVVGCITALGGGTIRDVIWGKSPAFWLDETEYLYMSIAAAAAAFW-------FCYYEEPGKQLLE--FVVFWGDTLGIGAFAVIGTMYAVRMGFGIIITLVCCCITCTGGGVIRDTLVKRPVRVMHNLEEVYAEAAVSGGAAYLLARGAGLPLQVRVLVGAGTTIALRILATKYNIK 228 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1069.1.1 >prot_D-mesarthrocarpus_Contig1069.1.1 ID=prot_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=334bp MTLAKLCFAGVLISVAWRVEGATSPVDKFIFRFAGANKPPERTPIDHCLIback to top mRNA from alignment at D-mesarthrocarpus_Contig1069:426..3940+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1069.1.1 ID=mRNA_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3515bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1069:426..3940+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1069:426..3940+ >mRNA_D-mesarthrocarpus_Contig1069.1.1 ID=mRNA_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1002bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1069:426..3940+ (Discosporangium mesarthrocarpum MT17_79)back to top |