mRNA_D-mesarthrocarpus_Contig1069.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1069.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig1069.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA)

HSP 1 Score: 273 bits (698), Expect = 6.360e-81
Identity = 135/241 (56.02%), Postives = 170/241 (70.54%), Query Frame = 1
Query:  535 RRDWTSTVPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            ++ W      N+ G  P E MTRYPSL + GGLLRSLDYLGT +FA  GAI AG  GM+L+GC+ + VITA+GGGTTRD+L+GQTPVFW++EVEYL +C+VT++A  Y WP L    ++S+ G    DG   R LDTIGLGAF+VVG+QHGIR+  HP  T+VIA ITC  GG+ RDV+TKAP+ VM  +AELYA+ AA GS  YL AR    DPL+R+  G   T+  R  +WT  L+LP
Sbjct:   27 KKAWLKIKNANQ-GDLPRESMTRYPSLRSAGGLLRSLDYLGTVAFATGGAICAGRAGMDLLGCIEIGVITAMGGGTTRDLLLGQTPVFWLQEVEYLAMCIVTSIATFYAWPHLRHMPILSASGSS-DDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLP 265          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6H5JCP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP2_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.630e-58
Identity = 125/336 (37.20%), Postives = 169/336 (50.30%), Query Frame = 1
Query:  562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEV--------------------------------------------------------------------------------------------------------EYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            VNRR +   E ++RYP+ ++PGGL+R LDY+GT SFA SGA TAG+RGMNL+GC+ V V+ A GGGT RD+L+GQTPVFW+ EV                                                                                                        EY+ ICVVTA+    LWP LSR +++S  G  + DG  S+ +DT+GL +F+V  +Q+GIR+  HP  TIVI  ITC GGGI+RDVLT +PV  +  +A++Y S AA+GS  YL AR    DPL R+ +G  T +++R+L+  Y L+LP
Sbjct:   93 VNRRAIPTPEALSRYPNFKSPGGLVRFLDYVGTVSFAMSGAATAGMRGMNLLGCIFVGVLAATGGGTVRDLLLGQTPVFWLVEVGVRGAWIVLFFCGAGDLVGRSLCPTSPCAFLRFLACLDAWVELALRRFCSVDGGVGCLPSLALLFLIGRIWRCLLMFVLRHSSVVWPVAVLLSWTPLLLPLSQVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGL-DGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAIGSGAYLLARRYSKDPLFRICVGFFTVIILRLLACLYDLRLP 427          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A5J4Z897_PORPP (UPF0126 membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z897_PORPP)

HSP 1 Score: 207 bits (528), Expect = 8.280e-56
Identity = 103/223 (46.19%), Postives = 148/223 (66.37%), Query Frame = 1
Query:  589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            + M RYP L +PGG LR+ DY+GT+ FA +GA+TA   GM+++GC +V  ITA+GGGTTRD+LMG  PVFW+ E EY+ I V T+L A + WP       VS   G   D  F  ++D+  LGAFS +G+ +GIR G++P + +V AV+TC  GG++RD   K PV V+   AE+YA+ AA+GS  Y+ AR      ++R+ +G+S+T +MR+ +  YG +LP
Sbjct:  122 DSMPRYPDL-SPGGFLRAFDYIGTSIFALTGALTAASGGMDVLGCTVVGTITAVGGGTTRDLLMGARPVFWLIESEYIAIAVATSLLAFFFWPD------VSDALGITEDEYFINVIDSWSLGAFSCIGTMNGIRAGYNPLIVLVCAVVTCTFGGVVRDTFLKRPVRVLHSYAEIYATTAAVGSIAYMAARAMQLPLVLRISLGLSSTFIMRLWAMKYGTRLP 337          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: D8LE41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE41_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 6.330e-55
Identity = 98/232 (42.24%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            +NR    P +G+TRYP+  +P G+LR LDYLGT  FA SG +TAG  GM+L+GC++V  ITA GGGT RDVL+G TPVFWM E EYL +C+ T +   +LW +L+         G   D      +D +G+GAF  +G+Q G+RKG    + +   ++T   GG+IRDVL   P  ++  + E+YAS A LGS++Y+  +     P++R++ G  + + +RVL++T  ++LP
Sbjct:   61 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGQVGMDLLGCIIVGTITATGGGTVRDVLLGNTPVFWMHETEYLWMCLATTVGIFFLWSYLAE-------RGVRDDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 285          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6H5JGY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY7_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.100e-53
Identity = 97/232 (41.81%), Postives = 147/232 (63.36%), Query Frame = 1
Query:  562 VNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            +NR    P +G+TRYP+  +P G+LR LDYLGT  FA SG +TAG  GM+L+GC++V  ITA GGGT RD+L+G TPVFWM E EYL +C+ T++   +LW +L+         G   D      +D +G+GAF  +G+Q G+RKG    + +   ++T   GG+IRDVL   P  ++  + E+YAS A LGS++Y+  +     P++R++ G  + + +RVL++T  ++LP
Sbjct:  143 INRYIEPPEDGLTRYPTFRSPQGVLRGLDYLGTTVFAISGTVTAGHVGMDLLGCIIVGTITATGGGTVRDMLLGNTPVFWMHETEYLWMCLATSVGVFFLWSYLAE-------RGVRNDMALLNWVDAMGVGAFCCIGAQAGVRKGLSNVVCVACGMLTSTFGGVIRDVLCSRPPRILFSHCEIYASTAVLGSAVYIATKAAGLPPVVRIMSGFLSAVALRVLAFTTDIRLP 367          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A836CDZ5_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.470e-50
Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 1
Query:  589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            +G+TRYPSL +P G+LR LD  GT  FA+SG +TAG  GM+L+GC +V  ITA+GGGT RD+L+G TPVFWM E EYL IC+  A+   + +  L+         G   D +     D +G+GAF V+G+Q+ +R+     + +   + T   GG+IRDVL + P  ++  +AE+YAS A +G+  Y+  R     P++R+  G      +R+ +W   L+LP
Sbjct:   22 DGLTRYPSLSSPQGVLRGLDLFGTVVFAYSGCVTAGQAGMDLLGCTIVGTITAVGGGTVRDLLLGNTPVFWMTETEYLYICLAAAVGTFFTYSALAE-------QGFTTDSELLNWADALGVGAFCVIGAQNAVRRRLSTAICVACGMFTATFGGVIRDVLCQRPPRILHSHAEIYASTALVGAGTYMALRRARATPMLRIAGGFGAAFALRIAAWKLQLRLP 237          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A7S1TDV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDV4_9RHOD)

HSP 1 Score: 186 bits (471), Expect = 8.270e-50
Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 1
Query:  589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            +GM R+P+    GGLLR LDY GT  FAFSG + A   GM+L+GC +V  ITA+GGGT RD+ +G  PVFWM E EYL +C++T+   + LWP L+R +  SS   ++         D  GL AF V+G+Q+GIR G  P +++V  ++T   GG+IRDVL + P  ++  +AE+YAS AA+G++ Y+ A         R+ +G+   +  R+ ++TY ++LP
Sbjct:    6 DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKV-----ELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLP 222          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A6T5MA33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MA33_HETAK)

HSP 1 Score: 188 bits (478), Expect = 1.570e-49
Identity = 99/253 (39.13%), Postives = 149/253 (58.89%), Query Frame = 1
Query:  523 KGWYR-RDWTST------VPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLPH 1260
            KGW++ + + ST       P   +     +GM R+PS    GGLLR LDY GT  FA  G++TAG+ GM+L+GC +V  +TA+GGGT RD+L+G  PVFWM E EY+ + +  A A  + W +L     +        + D  R  D  G+GAFSV+G+Q+G+R G HP + +V  +IT   GG+IRDVL + P  ++   +E+YA+ A +G++ Y  AR     P  ++ +G S  +  R  +WTY ++LP+
Sbjct:   75 KGWFQPKRFNSTNKPPAEAPPAAKPPVHTDGMPRFPSTSA-GGLLRGLDYFGTVVFALGGSVTAGLAGMDLLGCTIVGTVTAVGGGTVRDLLLGNFPVFWMLETEYVLLSLACAWAGFFGWDYLHEHWHLEE------NSDILRWWDACGVGAFSVIGAQNGLRAGLHPAVAVVCGMITATFGGMIRDVLCQKPPRILHSQSEVYATTALIGAAAYTAARSL--PPAAKIGLGFSAAVASRYAAWTYDIRLPN 318          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A7S1XFC8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFC8_9RHOD)

HSP 1 Score: 187 bits (474), Expect = 4.500e-49
Identity = 106/277 (38.27%), Postives = 159/277 (57.40%), Query Frame = 1
Query:  439 GVAVEGWRVEERDGAP----LASVDFQVETTSKGWYRRDWTSTVPVNRRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLKLP 1257
            G++   WR +  D AP    L     +  T   G  +R  +S+  V        +GM R+P+    GGLLR LDY GT  FAFSG + A   GM+L+GC +V  ITA+GGGT RD+ +G  PVFWM E EYL +C++T+   + LWP L+R +  SS   ++         D  GL AF V+G+Q+GIR G  P +++V  ++T   GG+IRDVL + P  ++  +AE+YAS AA+G++ Y+ A         R+ +G+   +  R+ ++TY ++LP
Sbjct:   51 GISQRVWR-DLHDDAPSRRYLQHYRLRGRTLGPGLPKRYSSSSSMV--------DGMPRFPNWSA-GGLLRGLDYGGTIVFAFSGTVQAAAHGMDLLGCSVVGAITAVGGGTVRDLFLGNRPVFWMVETEYLILCLITSGLTLALWPVLTRDSNSSSTFKKV-----ELYSDAAGLSAFCVIGAQNGIRLGVPPIISVVCGMMTATFGGVIRDVLCQRPARILHSHAEVYASCAAVGAASYVLAARMMMAMPARIGVGVGAALTARIAAFTYDIRLP 312          
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Match: A0A0S4JKV7_BODSA (Uncharacterized protein n=2 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JKV7_BODSA)

HSP 1 Score: 181 bits (459), Expect = 5.200e-48
Identity = 98/222 (44.14%), Postives = 137/222 (61.71%), Query Frame = 1
Query:  589 EGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLMGCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWPFLSRFALVSSPGGRMADGDFSRLL-DTIGLGAFSVVGSQHGIRKGFHPFLTIVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQWDDPLIRLIMGISTTMLMRVLSWTYGLK 1251
            EGM RYP+L   G L R LDY GT  FA SG+I A + GM+ +GCV+V  ITA+GGGT RDV+ G++P FW++E EYL + +  A AA +       F     PG ++ +  F     DT+G+GAF+V+G+ + +R GF   +T+V   ITC GGG+IRD L K PV VM    E+YA AA  G + YL AR       +R+++G  TT+ +R+L+  Y +K
Sbjct:   17 EGMPRYPNLSVLGAL-RGLDYAGTMIFAVSGSILASMYGMDGLGCVVVGCITALGGGTIRDVIWGKSPAFWLDETEYLYMSIAAAAAAFW-------FCYYEEPGKQLLE--FVVFWGDTLGIGAFAVIGTMYAVRMGFGIIITLVCCCITCTGGGVIRDTLVKRPVRVMHNLEEVYAEAAVSGGAAYLLARGAGLPLQVRVLVGAGTTIALRILATKYNIK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1069.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGC7_9STRA6.360e-8156.02UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5JCP2_9PHAE1.630e-5837.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4Z897_PORPP8.280e-5646.19UPF0126 membrane protein n=1 Tax=Porphyridium purp... [more]
D8LE41_ECTSI6.330e-5542.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGY7_9PHAE1.100e-5341.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CDZ5_9STRA1.470e-5040.36UPF0126 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1TDV4_9RHOD8.270e-5042.15Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6T5MA33_HETAK1.570e-4939.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XFC8_9RHOD4.500e-4938.27Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0S4JKV7_BODSA5.200e-4844.14Uncharacterized protein n=2 Tax=Bodo saltans TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1069contigD-mesarthrocarpus_Contig1069:426..3940 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LE41
PFAMsACT_6,UPF0126
Model size2976
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue1.02e-60
EggNOG OGs2B6TB@1|root,2S0MY@2759|Eukaryota
Ec32 ortholog descriptionUncharacterised domain UPF0126
Ec32 orthologEc-14_002260.1
DescriptionUPF0126 domain
Cds size1002
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789203.1426322-UTR-D-mesarthrocarpus_Contig1069:425..6921680789203.1426322-UTR-D-mesarthrocarpus_Contig1069:425..692Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1069 426..692 +
1680789203.2010286-UTR-D-mesarthrocarpus_Contig1069:2233..39401680789203.2010286-UTR-D-mesarthrocarpus_Contig1069:2233..3940Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1069 2234..3940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789203.1589909-CDS-D-mesarthrocarpus_Contig1069:692..12351680789203.1589909-CDS-D-mesarthrocarpus_Contig1069:692..1235Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1069 693..1235 +
1680789203.1762068-CDS-D-mesarthrocarpus_Contig1069:1545..18001680789203.1762068-CDS-D-mesarthrocarpus_Contig1069:1545..1800Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1069 1546..1800 +
1680789203.1889398-CDS-D-mesarthrocarpus_Contig1069:2029..22331680789203.1889398-CDS-D-mesarthrocarpus_Contig1069:2029..2233Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1069 2030..2233 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1069.1.1prot_D-mesarthrocarpus_Contig1069.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1069 693..2233 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1069.1.1

>prot_D-mesarthrocarpus_Contig1069.1.1 ID=prot_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=334bp
MTLAKLCFAGVLISVAWRVEGATSPVDKFIFRFAGANKPPERTPIDHCLI
TPQNDTGGVAVEGWRVEERDGAPLASVDFQVETTSKGWYRRDWTSTVPVN
RRGVTPGEGMTRYPSLETPGGLLRSLDYLGTASFAFSGAITAGVRGMNLM
GCVMVAVITAIGGGTTRDVLMGQTPVFWMEEVEYLGICVVTALAAVYLWP
FLSRFALVSSPGGRMADGDFSRLLDTIGLGAFSVVGSQHGIRKGFHPFLT
IVIAVITCCGGGIIRDVLTKAPVAVMQGNAELYASAAALGSSLYLWARHQ
WDDPLIRLIMGISTTMLMRVLSWTYGLKLPHAL*
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mRNA from alignment at D-mesarthrocarpus_Contig1069:426..3940+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1069.1.1 ID=mRNA_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3515bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1069:426..3940+ (Discosporangium mesarthrocarpum MT17_79)
CTTACGATTCTGCCTCTGATGAAATGACGAAGGACCCCCCTCAACCATCT GCTACTACTTACCTGCAGAGCTGCCTGGTTGGAGTTGGCATGAGAACCGT TGCGGGAGATTGACTTAATCACCACTTGAAAGCCTCGACTCTGACTCGCA CTCATCTCCGGAGTCTCGAACATTCCATCTGTGGTGTTTCAACCCTACTG CAGCCTTTCCTTCGCCTCTCACAACTGCCCGTACGTGTGTCAACCGGACT CCCAGCACAACACAATAATGACACTGGCAAAGCTATGTTTCGCTGGTGTC CTCATTTCCGTGGCCTGGAGAGTAGAAGGGGCAACATCCCCCGTGGATAA GTTCATCTTCCGCTTTGCTGGCGCCAACAAGCCGCCGGAACGTACGCCCA TCGACCATTGTTTGATAACTCCACAAAACGACACGGGAGGCGTCGCGGTG GAAGGCTGGAGAGTTGAAGAGCGAGACGGTGCCCCATTGGCTTCTGTGGA CTTCCAGGTGGAGACGACGTCGAAGGGATGGTATCGTAGGGACTGGACTT CGACAGTCCCCGTGAACCGACGAGGTGTTACGCCAGGCGAGGGTATGACG AGATATCCTTCTCTCGAAACTCCCGGTGGACTCTTGCGGTCGCTGGATTA CCTCGGCACGGCGTCGTTTGCCTTCTCAGGTGCTATCACGGCAGGTGTTC GAGGAATGAACCTGATGGGGTGCGTAATGGTGGCAGTGATTACGGCCATC GGCGGAGGGACAACAAGGGATGTCCTCATGGGCCAGACGCCTGTATTCTG GATGGAGGAGGTAAGTGGGAGAGCCCATAGACATGCTTCATATTTACAGA TGACCACACTGGTGACCTGGTGCCGGTGGCTGTGATCTCCCCCTTGTAAA TGTCTCTTTGTCGTAAGTTTCAGTGGGTGGAAGTCATCGTGGGAGGAAAT GATACCCAGGTCGATGGGCGTTTTCCATCATTAGGGCCCATAAATCAGAT TTCCTAGTTACACTTCGGAATCCTGAAGCCCTATGGAAGTCGTCCCCTTG GCCTCCTATCCCTTTGGTACGCCCTTACTCGCCTATCCACTTTTCTTTTT TTTTAACCCTGTGCGTACAGGTCGAGTACCTGGGCATCTGTGTGGTGACA GCTCTCGCTGCTGTGTATCTATGGCCGTTTCTTAGCCGCTTTGCGCTGGT GTCCTCCCCTGGTGGGAGGATGGCTGACGGAGACTTCTCCCGCTTGCTTG ACACCATCGGCCTGGGTGCCTTCTCGGTGGTGGGGTCGCAGCATGGCATC CGGAAGGGCTTTCATCCGTTCCTGACCATCGTTATAGCCGTCATCACGTG CTGCGGGGGGGGAATAATCAGAGACGTGAGTCTGAACACGGTTGGGCGTG GGCTGTAGGATCAAGAACTTTGCCTATACCCATACAGAAGGTGATGCTTT GGTCTTCTGGTTCACACATATCTTTTCCACTTGGAGAAGACAGGTCAGGC GGGTGGAGATAGGCAGAAACAACTGCTAAGGAAGTGACATCTCATTCACG ACTTACCCTTCCACCCCCCCTCCCTGCCTGCTATCAATCATCCCTGCCTC GCAGGTGCTCACTAAAGCACCTGTGGCAGTGATGCAGGGGAATGCTGAGC TGTATGCCAGTGCAGCAGCTCTGGGCTCTTCCCTGTACCTCTGGGCTCGG CACCAGTGGGATGACCCCCTCATTCGCCTGATCATGGGGATCTCAACCAC CATGCTGATGCGTGTGCTTTCATGGACCTACGGCCTGAAGCTGCCGCATG CGCTGTGAATTGACTCTCAAGCTGTCATCACCCCCACCCACGAGAGGTCA AGGGAGACATTCATTTTCCTTGTAGCCAGAGGGGTGCTGTGTGGTGGTGG CAGTGGTGTCCGTAGTGCGTTGTTGGAGGTTGTCCAATGGTTAAAATAAA GAAGACAGGCGTGTGTTGCCAGGCTGCCCCTGTGTATTTTCATGCCTGGC ATGACGAGCGCAACTTTGTGAATATCGAGTAGAGGGGAGGACTGTGGGGG TATGTTTGTGGAGTGGGGTTTAATTCAACAGGTGTGTTTCTGTGCACCCA TTGCGACAGCTACACCTCCACCTTCTCCCACTGGGGTCTCTTCCCCTTTC TGTGAAAGAGAGTTGAAGTTGTGTAAATACGATACAATGAATCATGGTAT ACAATGTGGTGGCTGCATGGGGGAGCATGAAACCTCCCCCCTCCCCCCTT GGTGAGGGTGTTTCAAGATAAAAATCCGGGTAAATCTGCTCGCTGATTGT TCCATTGATGTTGAGACCGCTGGCAGTGTGTTAGCTTGGGGGGCATTGCT GTTTCTTGGGAGGGTGGCCCGGTGGTAGCCCAGAGAGTAGTGTGTTGTCA CCCAGTGTGCCCCTGTTTTCCTTGTGAGCAGGGCATGGTGCAATTGGCAT CACCTCCTATGTGTGTGGTCCCCTGGCTGAGTGATGTAGACTAGCCATCA AAGGGAGGGAGGGTGAAGGTTTCATCTTGCGGGCTGGATGGTGTATTTTT CTGTTTTTTTTGTGATTGTTGGCGGCTGCCTAAGGGAGATGTGTTGGCTG GAGGGTTGTACCGCATGCCTTTCATGCTTTGTTTGCGTGTGGCCTGGTGA AGAGGAAGAGATCAAACCCTGGTGGAGGATAAAGCAGAGATGACAGGACC AGAGCGATTTTTTCCAATCCTGATAGCCAGCTAAGCAAAGAAATAGTTGA GAGGTTGTGTACAAGAAGGGGAGTCAATTGCAGAGCCTTTCTCCAGTTGG CCAGGGTGGGGGGTAGAGCAGGAAGGTGCTGGCATCCCATGCAGTCAGTG GTCATTTAGCAAGGGCCATGTTGAGAAATGAAGTAGCTTTGTTGTTAAGC AAGTGGTACTTGGCGATATCTTTCCTTACTCCATGATTCATATGTCAACT GGGGCTGACTAGGGGGAAGAGAGCTGTGGTCTCAAGTCCACTGTATTTTT CCCACCCCCTTTTCGACCCCTGGACATCAGAAGAGAGTGCGATTGTGCCT GGTCTGACCGCATCAGCCAGCAGGGCTTGTTTTTCTTTCTGCTTGCATGG CATGTGCTGCATGTAGTACATGTTCAACATAAAATTATCAATGGGGGCAC GTCATTGGGTAGCTTTTTGGATAAGAGGAAGCGAACACGTCACATGAGAC TCCGTGGAGGATGGGGTTATGTGCAGCTCTGGGTCCAGTCAGGTATAATG TCTGCTCCTGGACTGGGGGCCTATCTCTGGGCTTCCCTACTAGGGTATTA AGTTATTTGTGTACGGGTGAAGCTTGGTATAGGGATATGTACGGGTGAAT GAGAGACTTCGAAGAGGCTAAGGGTGGGCAGTGCCAATGAACAAGTTTGA AGATCCGTTTGTTCTCTTGCCGTGGGAAGAAACACATGCATCTTATGTTT GAGGAGGGTACATGGATCACATAAGCACGCTGCCAAACAACCAATTGCTT AAAAGAAATCGTCAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1069:426..3940+

>mRNA_D-mesarthrocarpus_Contig1069.1.1 ID=mRNA_D-mesarthrocarpus_Contig1069.1.1|Name=mRNA_D-mesarthrocarpus_Contig1069.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1002bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1069:426..3940+ (Discosporangium mesarthrocarpum MT17_79)
ATGACACTGGCAAAGCTATGTTTCGCTGGTGTCCTCATTTCCGTGGCCTG
GAGAGTAGAAGGGGCAACATCCCCCGTGGATAAGTTCATCTTCCGCTTTG
CTGGCGCCAACAAGCCGCCGGAACGTACGCCCATCGACCATTGTTTGATA
ACTCCACAAAACGACACGGGAGGCGTCGCGGTGGAAGGCTGGAGAGTTGA
AGAGCGAGACGGTGCCCCATTGGCTTCTGTGGACTTCCAGGTGGAGACGA
CGTCGAAGGGATGGTATCGTAGGGACTGGACTTCGACAGTCCCCGTGAAC
CGACGAGGTGTTACGCCAGGCGAGGGTATGACGAGATATCCTTCTCTCGA
AACTCCCGGTGGACTCTTGCGGTCGCTGGATTACCTCGGCACGGCGTCGT
TTGCCTTCTCAGGTGCTATCACGGCAGGTGTTCGAGGAATGAACCTGATG
GGGTGCGTAATGGTGGCAGTGATTACGGCCATCGGCGGAGGGACAACAAG
GGATGTCCTCATGGGCCAGACGCCTGTATTCTGGATGGAGGAGGTCGAGT
ACCTGGGCATCTGTGTGGTGACAGCTCTCGCTGCTGTGTATCTATGGCCG
TTTCTTAGCCGCTTTGCGCTGGTGTCCTCCCCTGGTGGGAGGATGGCTGA
CGGAGACTTCTCCCGCTTGCTTGACACCATCGGCCTGGGTGCCTTCTCGG
TGGTGGGGTCGCAGCATGGCATCCGGAAGGGCTTTCATCCGTTCCTGACC
ATCGTTATAGCCGTCATCACGTGCTGCGGGGGGGGAATAATCAGAGACGT
GCTCACTAAAGCACCTGTGGCAGTGATGCAGGGGAATGCTGAGCTGTATG
CCAGTGCAGCAGCTCTGGGCTCTTCCCTGTACCTCTGGGCTCGGCACCAG
TGGGATGACCCCCTCATTCGCCTGATCATGGGGATCTCAACCACCATGCT
GATGCGTGTGCTTTCATGGACCTACGGCCTGAAGCTGCCGCATGCGCTGT
GA
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