mRNA_D-mesarthrocarpus_Contig10668.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10668.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10668.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 2.360e-127
Identity = 187/196 (95.41%), Postives = 191/196 (97.45%), Query Frame = 1 
Query:    1 NGSAPGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSN-ANLIDIKV 585
            NG AP VPQIAPLAKYKLVFLGDQSVGKTS+ITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNT+KWIEDVR+ERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAK EGIMFIETSAKGGYNIKALFRKLATALPGMETAP TSN ANLIDIK+
Sbjct:    7 NGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNANLIDIKL 202
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A6V1RZC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZC8_HETAK)

HSP 1 Score: 337 bits (864), Expect = 1.630e-115
Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = 1 
Query:   13 PGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            PGVPQIAPLAKYKLVFLGDQSVGKTS+ITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNT+KWIEDVRSERGNDVV+MLVGNKTDL +RRQVS EEG DRA+ EG++F E SAK G N+K +FR+LA ALPGME+AP TSNANLIDIK+
Sbjct:   35 PGVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRSERGNDVVIMLVGNKTDLADRRQVSAEEGGDRAQAEGVIFAEASAKSGANVKGVFRQLAAALPGMESAPTTSNANLIDIKL 225
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 334 bits (857), Expect = 9.780e-115
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = 1 
Query:   10 APGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGME-TAPVTSNANLIDIKV 585
            +PGVPQI PLAKYKLVFLGDQSVGKTS+ITRFMYDNFDKNYQATIGIDFLSKTMY+ DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNT+KW+EDVR+ERGNDVV+MLVGNKTDL +RRQVSVEEGE+RAK E IMFIETSAK GYN+KALF KLATALPGM+ T P+  N N+IDIK+
Sbjct:   15 SPGVPQITPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYMPDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQVSVEEGEERAKSEQIMFIETSAKAGYNVKALFNKLATALPGMDATQPLAPNTNMIDIKL 207
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A836CM24_9STRA (Rab6, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM24_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.270e-114
Identity = 164/189 (86.77%), Postives = 183/189 (96.83%), Query Frame = 1 
Query:   19 VPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            +PQ+APLAKYKLVFLGDQSVGKTS+ITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLN+++WI+DVR+ERGN+VV+MLVGNKTDL +RRQVSVEEGED+AK EG+M IETSAK GYNIK LFRKLATALPGME+AP T+++NLIDIK+
Sbjct:   16 IPQVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNSSEWIKDVRAERGNEVVIMLVGNKTDLADRRQVSVEEGEDKAKKEGVMHIETSAKAGYNIKPLFRKLATALPGMESAPSTASSNLIDIKL 204
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: K3WVM7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM7_GLOUD)

HSP 1 Score: 322 bits (824), Expect = 1.470e-109
Identity = 159/189 (84.13%), Postives = 174/189 (92.06%), Query Frame = 1 
Query:   19 VPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNT+KWIEDVR+ERG DVV+MLVGNKTD+ ERRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   31 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISERRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKL 219
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.780e-109
Identity = 159/193 (82.38%), Postives = 176/193 (91.19%), Query Frame = 1 
Query:    7 SAPGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            S   +PQI  LAKYKLVFLGDQ VGKTS+ITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNT+KW++DVR+ERGNDV++MLVGNKTDL +RRQVS EEGED+AK + IMFIETSAK G+NIK LFRKLATALPGME+A    +ANLIDIK+
Sbjct:   12 SPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKL 204
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A5D6XJX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJX8_9STRA)

HSP 1 Score: 320 bits (821), Expect = 5.180e-109
Identity = 159/192 (82.81%), Postives = 174/192 (90.62%), Query Frame = 1 
Query:   10 APGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            A  VPQIAPLAKYKLVFLGDQ VGKTSVITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNT+KWIEDVR+ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   34 AVSVPQIAPLAKYKLVFLGDQGVGKTSVITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTAISGDSNLIDIKL 225
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BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A0P1AX93_PLAHL (Rab family gtpase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX93_PLAHL)

HSP 1 Score: 320 bits (821), Expect = 5.550e-109
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 1 
Query:   19 VPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNT+KWIEDVR+ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +M+IETSAK GYNIKALFRKLAT LPGME   +T ++NLIDIK+
Sbjct:   39 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVVMLVGNKTDISDRRQVSIEEGSDKAKEENVMYIETSAKAGYNIKALFRKLATVLPGMENTMITGDSNLIDIKL 227
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: W2LJW2_PHYPR (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2LJW2_PHYPR)

HSP 1 Score: 320 bits (820), Expect = 1.620e-108
Identity = 158/189 (83.60%), Postives = 174/189 (92.06%), Query Frame = 1 
Query:   19 VPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNT+KWIEDVR+ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   60 VPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKL 248
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Match: A0A8K1CRQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRQ3_PYTOL)

HSP 1 Score: 319 bits (817), Expect = 2.030e-108
Identity = 157/194 (80.93%), Postives = 175/194 (90.21%), Query Frame = 1 
Query:    4 GSAPGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGEGIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV 585
            G +  VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNT+KWIEDVR+ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK G+NIKALFRKLAT LPGME   ++ ++NLIDIK+
Sbjct:   31 GGSVTVPQIAPLAKYKLVFLGDQGVGKTSIITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGFNIKALFRKLATVLPGMENTAISGDSNLIDIKL 224
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10668.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ4_ECTSI2.360e-12795.41Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1RZC8_HETAK1.630e-11587.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZT5_9STRA9.780e-11586.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CM24_9STRA2.270e-11486.77Rab6, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
K3WVM7_GLOUD1.470e-10984.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A4D9D1C8_9STRA2.780e-10982.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A5D6XJX8_9STRA5.180e-10982.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AX93_PLAHL5.550e-10983.60Rab family gtpase n=1 Tax=Plasmopara halstedii Tax... [more]
W2LJW2_PHYPR1.620e-10883.60Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
A0A8K1CRQ3_PYTOL2.030e-10880.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10668contigD-mesarthrocarpus_Contig10668:219..4127 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FMQ4
Preferred nameRab6
PFAMsRas
Model size585
Max annot lvl2759|Eukaryota
KEGG koko:K07893,ko:K07976
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005911,GO:0006810,GO:0006890,GO:0006891,GO:0008150,GO:0009506,GO:0012505,GO:0016020,GO:0016192,GO:0016197,GO:0016482,GO:0017076,GO:0019001,GO:0030054,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042147,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055044,GO:0071944,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:1901265,GO:1901363
Exons5
Evalue3.87e-128
EggNOG OGsKOG0094@1|root,KOG0094@2759|Eukaryota
Ec32 ortholog descriptionRab6, RAB family GTPase
Ec32 orthologEc-23_001190.1
Descriptionretrograde vesicle-mediated transport, Golgi to ER
Cds size585
COG categoryS
BRITEko00000,ko04031,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789201.7288876-CDS-D-mesarthrocarpus_Contig10668:218..3881680789201.7288876-CDS-D-mesarthrocarpus_Contig10668:218..388Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10668 219..388 +
1680789201.7459428-CDS-D-mesarthrocarpus_Contig10668:1089..12241680789201.7459428-CDS-D-mesarthrocarpus_Contig10668:1089..1224Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10668 1090..1224 +
1680789201.757256-CDS-D-mesarthrocarpus_Contig10668:2108..22141680789201.757256-CDS-D-mesarthrocarpus_Contig10668:2108..2214Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10668 2109..2214 +
1680789201.7730968-CDS-D-mesarthrocarpus_Contig10668:3264..33511680789201.7730968-CDS-D-mesarthrocarpus_Contig10668:3264..3351Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10668 3265..3351 +
1680789201.784081-CDS-D-mesarthrocarpus_Contig10668:4040..41271680789201.784081-CDS-D-mesarthrocarpus_Contig10668:4040..4127Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10668 4041..4127 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10668.1.1prot_D-mesarthrocarpus_Contig10668.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10668 219..4127 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10668.1.1

>prot_D-mesarthrocarpus_Contig10668.1.1 ID=prot_D-mesarthrocarpus_Contig10668.1.1|Name=mRNA_D-mesarthrocarpus_Contig10668.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=195bp
NGSAPGVPQIAPLAKYKLVFLGDQSVGKTSVITRFMYDNFDKNYQATIGI
DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNR
ASFLNTNKWIEDVRSERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKGE
GIMFIETSAKGGYNIKALFRKLATALPGMETAPVTSNANLIDIKV
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mRNA from alignment at D-mesarthrocarpus_Contig10668:219..4127+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10668.1.1 ID=mRNA_D-mesarthrocarpus_Contig10668.1.1|Name=mRNA_D-mesarthrocarpus_Contig10668.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3909bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10668:219..4127+ (Discosporangium mesarthrocarpum MT17_79)
AACGGCAGCGCTCCGGGCGTGCCACAGATCGCGCCCCTGGCCAAGTACAA
GCTGGTGTTCCTGGGGGACCAGAGCGTGGGGAAGACCAGCGTGATCACCC
GGTTTATGTATGATAACTTCGACAAGAACTACCAGGCCACTATCGGGATC
GACTTCCTCTCCAAGACCATGTGGGATGTGTTGGTTTGGTTTTGGTTTTG
GTTGGTTTGGTTGTGCCCTCTACTGTTGCCGAGCACCCCCCCCTTTTTTG
GGGGGGGGGGGAGGGGGGGGGGTGGGGGGTGGGGGGGGCAGCTCCCTGTG
CTGTGCGGATGCGTCGGTAGGTGCTCTAGAGCAGTGGGGCTGTGTGGAAT
GCTTGTGAACTGCAGGGTCATGCTAGGTGCATGTGATACGTACAAGAAAA
GGCGACAGTTCTAACCCTGAATGTACCTGTGGCCCTAAGTGCTAGATAAA
CTAGTGTTTGTGTATAACTGATACAACTAGATAAGCTAATGCTACTAGAT
ATACCAATGCTGCTAGATAAACCAGCGCTGCTAGAGAAACCAGTACTTCT
AGATAAACTAGTACCAGTAGATAACCTGACACAGGGGCTGCGTGCTGTGG
AGGATGTACCACCACTGATTAGATAAGAAGGAGTGATACTTCAACCACTT
GCTCTGAAGGGAGTATTCCAACCTGATAGGGGTCACCCTCTGCATCAATC
CTGTTGCTGTGTTTTGTAGTAGTGGCTGTATTTTCAAGGGAAAGGAGCTT
GTCACGTCAGCGGTGCTTTCCCCCGCCCTCTTGTACCGCCGCTTAGCTTG
AACGTGCTGCTGGACCTCTTCCTCTTCCTCTTCCTCTTCTTTTTTTTTTG
TTTGTGAAAAACTTGCCGCAGGTATCTGGAGGACCGGACAGTGCGGCTTC
AGCTGTGGGATACGGCAGGGCAGGAAAGATTCAGGTCACTCATCCCAAGT
TACATTCGAGACTCCTCGGTGGCGGTTATTGTGTATGACATCACAAACAG
GGCGAGGTGAGAGACCTTAACCCTAAGGGGGGAAGAGAGAGGGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGT
AAACAACAAACAACGCTCAGAATCACATGCAGTATATTCACAGGCTGTTG
CTGAGAACGGCACCACACCAGTCAGCAGGGAAGAGGAAGAGGTGAGAGAG
AGGCGAGGCGAGAGGGAAAAAACAGTGGGCAAGTGGTGGACGACAGACTA
GAGCGCGATCTGGACGGAGTGCTCCGCGCTACCCTACCGAGCACAACGCC
CGGCGGTACAGTATAGCCGATTGGAGGGAGGGTAAGAAGGCACGGGGCTC
AAGCCTCACGCAGCAGCGACAACAAAGATGGGGGGGAGAAGGCGGGAGGA
GAGCAGGAGGGTGCCCCTTGGAGCTCGAAGTCGCTCTCCTTCTCCAGACG
TGACACCTATATCTAGCACCTTACACCTTATCACTGCGCTCTTGATTGAT
TAGCCTGTGTTTGTACGACCCTAACCCTAACCTCTCCCCGCACCCGCGTG
CTCTGTGCGGTTGGCTGCTTGTTCGTGTGTGCCTGTCTGTCTGTCTGTCT
GTCTGTTGTCCGTCTGTCTGTTTTTTTTTTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTCTCCTGTTGTTGTAAACCCGTTTGCCTATCCATGCACGGGTTCTTTTT
ATTGATTCATCACTTGCTTGTTGTACAAAACAAAACCAAAACAAAACGAT
GGTGAATCAAACCAAAAATGACAAAAAAAACCCTACCAAAACAACAAAAC
AACACATAAAAAAACACAAAAAAAACGAAATGTTGAAAAGCTTCCTGAAC
ACAAACAAGTGGATCGAGGACGTCCGCAGTGAGAGAGGGAATGATGTGGT
GATGATGTTGGTGGGAAACAAGACCGACCTCAAGGAACGACGGCAGGTCA
GTCACAGTTAGTTGCAACTATGGTAACCGTCACAACTACGGTTGCAGTTA
CAACTATGGTTGCAGTAGCAACTATGGTAGCAGTCACAACTATGGTAACA
GTTACAACTATAGGGTTCGTCACAACTACAGTAACTGTCACAACTACGGT
TGCAGTTACGACTATGGTTGCAGTCACGGCTGCGGTTACAGTTTCAACTA
CGGTTACAGTTGCGTCGGGTTTTTTTCACTCCGGCTGGTGAGCTTCGTGG
CATGGCCTAGGGATGAATGCTAATAGAAGTGGCCGCCGCACTCGACCAGT
AGTGCGCCTTGCTCGTTGGTCACATCACAGAGGTTAGCACAGGGTAGTGC
CAGCACTCTGAGCAGCTCGGGGGCTTCGCTGGCTTCCGGGGCCAGGGCCG
GTGCTGATCTCCTTGTGGAAGGGTGTGCCGCCGTGCCGTGCCGTGCCTTG
CGGGGGGACATGGGGTTTGGCGTCAGGGTTAGGGATGGTCTCGCCTAGTG
GCGCTACTGTGCTCTTACTGTTCGTTGCATTGTCCCTATCCTGTACCCCC
CCCCTCCCCCCCCCCCCTCTTGATTGGTGTGTTATTCTGGGCCCGTTCTT
CTTTCCTCTTGTGTGTGTGCACCTGTCAACAGGTCAGCGCCGTGTGTGTC
CCTGCGTTGATGCACGCTCCTGACCCGTTTCTTATCTTGGCGGTAGCAAC
CCAAGCTTAAGCCAGGTGAAGGATGAGGCGCCGTGTCTCTCTTTCAGCTC
CCCCAAACCCTCCCTTTCTCCCCCCCCAACACACTGTGTCTGTGTGCACC
GCCCTCCCCTGCAACCATGGCAATTGAAACCGGAACCCTATCCGACTTAG
GTAGACAAGGATGCTGGAAAATGGGTGAAGGGCTCACCGTGAACTCCTTG
TGCTGTGTGGTCCACCTCACGGACGGCGACTCGCACTTGCCCCGCCTCTT
TGGTTTGGAACCCCAGCCCTAACCCTGAGAATCCTCCCGACAAGCTGATC
GAAATGGCGTTTAGAGCCCCCTACTAACTCTGTCCTGAACCTGAAGGTGT
CTGTCGAAGAGGGAGAAGACCGTGCCAAGGGGGAGGGCATCATGTTTATC
GAGACCAGCGCCAAGGGGGGATACAACATCAAGGTGAGCTTGTGCCTTTG
TGCATGTTGCATCCAGGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGA
GGTTTTCGTGCAGTCAACTGAGGCCGAGACCCTAGTATTCTTTTTCTTTT
TTTTTCTCAGGGCAAACATTCGGTGTTCTTTCCTTTTGGTTGCGGCTTGA
GCTCTATGGATAAGGGTTGGAAGGTTGGGGGAACCTCTGGTGGCCATCCT
GGGGAGGGAGGGGGGTAGGAGGCCACAAGGAGTAGAGATCTAGTTTAGGC
TAGGGTTGTGTCCATTCCGTGCTTTTCCACTCTGGTCAGGCCGGGCCCTG
CAAAAGAAAGGTGGAAAGAAGGAAAGGGGGGGGGAAGGGGCTCCTGCGGT
TCACATTCACACACTCACACCATGTGCTGGCACAAGGTTCCTTTTTTGCT
CTCTTTTTTACTTGCAAGTATTCTGGTCATTTTCTTCAGTTGACCCACCT
ACCCTAAAGCCTACCCGTGGTAGAGTGGACCTCTTCTCCAGTTCTGGGGT
TTTTGCTTCCTCTCCCTTTTCTTTCAGCGCGTTCTTTTTTAATTATTCCT
TGCTTGCTTGCAGAGCTTTATTCTTTTTTGTTCTAAAATGAAGTACTGCG
CAGTACTTTTTTAATTTAAATATATATTTTATTTTAATTCCCCCTCGCCC
CTCTGTTTCGGTGTGGGTGCAGGCATTGTTCCGGAAGCTAGCGACCGCCC
TGCCTGGGATGGAGACAGCGCCGGTTACCTCCAACGCAAACCTCATTGAT
ATCAAGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10668:219..4127+

>mRNA_D-mesarthrocarpus_Contig10668.1.1 ID=mRNA_D-mesarthrocarpus_Contig10668.1.1|Name=mRNA_D-mesarthrocarpus_Contig10668.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=585bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10668:219..4127+ (Discosporangium mesarthrocarpum MT17_79)
AACGGCAGCGCTCCGGGCGTGCCACAGATCGCGCCCCTGGCCAAGTACAA
GCTGGTGTTCCTGGGGGACCAGAGCGTGGGGAAGACCAGCGTGATCACCC
GGTTTATGTATGATAACTTCGACAAGAACTACCAGGCCACTATCGGGATC
GACTTCCTCTCCAAGACCATGTATCTGGAGGACCGGACAGTGCGGCTTCA
GCTGTGGGATACGGCAGGGCAGGAAAGATTCAGGTCACTCATCCCAAGTT
ACATTCGAGACTCCTCGGTGGCGGTTATTGTGTATGACATCACAAACAGG
GCGAGCTTCCTGAACACAAACAAGTGGATCGAGGACGTCCGCAGTGAGAG
AGGGAATGATGTGGTGATGATGTTGGTGGGAAACAAGACCGACCTCAAGG
AACGACGGCAGGTGTCTGTCGAAGAGGGAGAAGACCGTGCCAAGGGGGAG
GGCATCATGTTTATCGAGACCAGCGCCAAGGGGGGATACAACATCAAGGC
ATTGTTCCGGAAGCTAGCGACCGCCCTGCCTGGGATGGAGACAGCGCCGG
TTACCTCCAACGCAAACCTCATTGATATCAAGGTG
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