mRNA_D-mesarthrocarpus_Contig10665.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A6H5K1D7_9PHAE (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D7_9PHAE) HSP 1 Score: 119 bits (298), Expect = 2.560e-30 Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLRGEKGMSDDDVEAVLDKVMVIFR 240
M+ NLL RA+LDE + A DGNESY+YKLKEAWE FLN R NRP+EL+AKFLD KL+GEKG SDD+VEAVLD+VMV+FR
Sbjct: 1 MISNLLAFRAKLDECINTACDGNESYRYKLKEAWEAFLNARHNRPAELMAKFLDVKLKGEKGTSDDEVEAVLDRVMVLFR 80
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: D7FQS5_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS5_ECTSI) HSP 1 Score: 117 bits (294), Expect = 5.470e-29 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLRGEKGMSDDDVEAVLDKVMVIFR 240
M+ NLL RA+LDE + A DGNESY+YKLKEAWE FLN R NRP+EL+AKFLD KL+GEKG SDD+VEAVL++VMV+FR
Sbjct: 344 MISNLLAFRAKLDECINTACDGNESYRYKLKEAWEAFLNARHNRPAELMAKFLDVKLKGEKGTSDDEVEAVLERVMVLFR 423
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: UPI00103E2CE4 (cullin-4A-like n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103E2CE4) HSP 1 Score: 85.1 bits (209), Expect = 3.660e-19 Identity = 41/81 (50.62%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLR-GEKGMSDDDVEAVLDKVMVIFR 240
MVP LL+ + QLD VV+ NE + Y ++EA+E F+N RQN+P+EL+AKF+D KLR G K +++++E +LDK+MV+FR
Sbjct: 1 MVPELLEFKEQLDHVVSSCFQRNEKFTYSVREAFEHFINQRQNKPAELIAKFVDVKLRAGNKEATEEELERLLDKIMVLFR 81
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A1Y1HMX7_KLENI (Cullin 4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HMX7_KLENI) HSP 1 Score: 88.6 bits (218), Expect = 1.040e-18 Identity = 44/81 (54.32%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLR-GEKGMSDDDVEAVLDKVMVIFR 240
MV NLL L+A+LD ++ + GNE++ LKEA+E +N RQNRP+EL+AK++D+ LR G KG SD+++EA LDKV+V+FR
Sbjct: 406 MVSNLLDLKAKLDNILVQSFAGNEAFGNSLKEAFEHLINVRQNRPAELIAKYIDALLRAGNKGASDEELEATLDKVLVLFR 486
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A7S4D7J7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7J7_HETAK) HSP 1 Score: 87.4 bits (215), Expect = 2.230e-18 Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLRGEKGMSDDDVEAVLDKVMVIFR 240
+V LL R Q + V+ A + + ++ +K+AWE FLN +QNRP+EL+AK++DSKLRG+KG +D +VEA LDKVMV+FR
Sbjct: 59 LVERLLSFRDQAEAVLVGAFNRDPAFAAAVKDAWEHFLNVKQNRPAELLAKYVDSKLRGQKGSTDTEVEATLDKVMVVFR 138
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A4P9VWR5_9FUNG (Cullin family-domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VWR5_9FUNG) HSP 1 Score: 87.0 bits (214), Expect = 2.500e-18 Identity = 41/80 (51.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLRGEKGMSDDDVEAVLDKVMVIFR 240
MV +LLK + +LD+V + A +++ LKE++E F+N RQN+P+EL+AKF+D KLRGEKG+S+D++EA LD+ +V+FR
Sbjct: 1 MVEDLLKFKLRLDDVFSRAFQRADAFGNSLKESFENFINMRQNKPAELIAKFVDVKLRGEKGVSEDEMEAALDRCLVLFR 80
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A7R9UET0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET0_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 3.590e-18 Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLRGEKGMSDDDVEAVLDKVMVIFR 240
+V LL+ L++++ A + N+ + +KLK AWE FLN R+ +P+EL+AKFLD K+R +KG+S+ DVE VLDKVM IFR
Sbjct: 338 LVARLLEYNDTLNDILQHAFESNKDFAFKLKTAWEHFLNLRETKPAELMAKFLDEKMRSQKGLSEKDVEVVLDKVMQIFR 417
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A7S3REU1_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3REU1_9SPIT) HSP 1 Score: 86.7 bits (213), Expect = 4.850e-18 Identity = 44/81 (54.32%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLR-GEKGMSDDDVEAVLDKVMVIFR 240
MV LL+L+A+LD ++ A NE + + LKEA+E F+N RQNRP+EL+A++LDSKLR G KG S+D++E+ LDK M +FR
Sbjct: 215 MVQQLLELKAKLDLILIDAFANNEQFGHTLKEAFEHFINIRQNRPAELLARYLDSKLRAGNKGSSEDEIESCLDKAMTLFR 295
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A250WVC7_9CHLO (CULLIN_2 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WVC7_9CHLO) HSP 1 Score: 86.3 bits (212), Expect = 6.690e-18 Identity = 41/81 (50.62%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLR-GEKGMSDDDVEAVLDKVMVIFR 240
MV LL+L+++LDEV+ ++ NES+ LKEA+E F+N RQN+P+EL+AKF+D ++R G K S++++EA+LD+V+V+FR
Sbjct: 337 MVERLLELKSRLDEVLQKSLQRNESFSNSLKEAFESFINQRQNKPAELIAKFIDGRMRSGSKAGSEEEIEAMLDRVLVLFR 417
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Match: A0A7R9VBX8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VBX8_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 1.090e-17 Identity = 42/81 (51.85%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAKFLDSKLR-GEKGMSDDDVEAVLDKVMVIFR 240
MV LL+L+ QLDEV++ A NE++ LKEA+E F+N RQ++P+EL+AKF+D++LR G KG +++++E +LDKV+V+FR
Sbjct: 64 MVERLLELKTQLDEVLSHAFCRNEAFSNALKEAFESFINQRQSKPAELIAKFIDAQLRMGNKGQTEEELEGLLDKVLVLFR 144 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10665.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10665.1.1 >prot_D-mesarthrocarpus_Contig10665.1.1 ID=prot_D-mesarthrocarpus_Contig10665.1.1|Name=mRNA_D-mesarthrocarpus_Contig10665.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=81bp MVPNLLKLRAQLDEVVAVAMDGNESYQYKLKEAWEKFLNTRQNRPSELVAback to top mRNA from alignment at D-mesarthrocarpus_Contig10665:2757..3983+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10665.1.1 ID=mRNA_D-mesarthrocarpus_Contig10665.1.1|Name=mRNA_D-mesarthrocarpus_Contig10665.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1227bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10665:2757..3983+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10665:2757..3983+ >mRNA_D-mesarthrocarpus_Contig10665.1.1 ID=mRNA_D-mesarthrocarpus_Contig10665.1.1|Name=mRNA_D-mesarthrocarpus_Contig10665.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=243bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10665:2757..3983+ (Discosporangium mesarthrocarpum MT17_79)back to top |