mRNA_D-mesarthrocarpus_Contig10661.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10661.1.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE) HSP 1 Score: 573 bits (1478), Expect = 3.490e-181 Identity = 326/552 (59.06%), Postives = 374/552 (67.75%), Query Frame = 1
Query: 91 EPSREPLLLVGDLFSAPGPGEEEEAELRWEMEPKGHVSEQRGLEAAEHEAMLLACAVPTLRLLRHCLGQLSGAGLPPPSGPLDPVEAIFNLEAALALLPLDSPAHAGSFPKPPAGTASSEGGSSSVTSSNNTPLSASNKARDWDHGATEQVGLALRAEALILSSCRLWCPPYPWSDGPPHRGGEEGTGGAAALRVITGPGARGWGGFLHHLSTHTLACPANHAGGVRLLTALLPPECPTPLHRIVPPEALEVAGAXXXXXXXXEDGEGQEGGXXXXXXXXIGRLVGRVQVSAALERSEGLRRQALGALEQQLGALRERWDFCAAGEVYPQG------GGEDRVGVGRW---------------------AWRSSRTDNPLLAVTAPGAINVPAVVVNLCHTASPAQQGRVLELAKRAVDLGPMTAQALCAALVRSLIGCIERYIGHSKPANSRMQKDRDHSWEPVCRVLLVMLAVADKPRSGSGRVGLLLGGAIEALMPCLGLPKPEVIRSSLEVLCAFVEGPRVAEVRRFSDPPCSFSTLATATRNVVAKW 1665
+PS+EPLLLVGDLF+APGPGE EE ELRWE EP G VSEQRGLEAAEHEA LL CA+P LRLLRHCLG+LS AG PP GPLD V A+ + EAALA+LPLD P SS S+ P + ++ WD GAT V LALRAEAL+LSSCRLWCPP PWS R+ G G FLH +S H LACPANH G RLLTALLPPE P PLHR+V P A XXXXXXXX +GG +GRLVGRV +AALE+SEGLRRQA+ ALE+++ + E WD C AG+++P G D G G WR S NP+LAVTAPG +NVPAVV++LCH+ASP GRVLELA+RAV +GPMTA+ALCAALVRSLIGCIERY+G SKP + R KDR+ SWE VCRVL V+LAV+D PRSG+GRVGLL+GGAIEALMPCLGLPKPEVIRS+LEVLC+FVEG RV+EVRR+S+P CSF TLATA RNVVAKW
Sbjct: 1370 DPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPP------------------SSLPPGSDGKP--SPSREESWDFGATPSVALALRAEALVLSSCRLWCPPRPWS------------------RLRRNSGGGGSSSFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXTSDGGS-------VGRLVGRVHTAAALEKSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEADAAEAGPDGDGGGXXXXXXXXXXXXXXXXXXXXXXXGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVSIGPMTARALCAALVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVILAVSDNPRSGAGRVGLLIGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKW 1876
BLAST of mRNA_D-mesarthrocarpus_Contig10661.1.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI) HSP 1 Score: 562 bits (1449), Expect = 9.940e-178 Identity = 322/555 (58.02%), Postives = 371/555 (66.85%), Query Frame = 1
Query: 91 EPSREPLLLVGDLFSAPGPGEEEEAELRWEMEPKGHVSEQRGLEAAEHEAMLLACAVPTLRLLRHCLGQLSGAGLPPPSGPLDPVEAIFNLEAALALLPLDSPAHA---GSFPKPPAGTASSEGGSSSVTSSNNTPLSASNKARDWDHGATEQVGLALRAEALILSSCRLWCPPYPWSDGPPHRGGEEGTGGAAALRVITGPGARGWGGFLHHLSTHTLACPANHAGGVRLLTALLPPECPTPLHRIVPPEALEVAGAXXXXXXXXEDGEGQEGGXXXXXXXXIGRLVGRVQVSAALERSEGLRRQALGALEQQLGALRERWDFCAAGEVYP-------------QGGGEDRVGVG--------------RWAWRSSRTDNPLLAVTAPGAINVPAVVVNLCHTASPAQQGRVLELAKRAVDLGPMTAQALCAALVRSLIGCIERYIGHSKPANSRMQKDRDHSWEPVCRVLLVMLAVADKPRSGSGRVGLLLGGAIEALMPCLGLPKPEVIRSSLEVLCAFVEGPRVAEVRRFSDPPCSFSTLATATRNVVAKW 1665
+PS+EPLLLVGDLF+APGPGE EE ELRWE EP G VSEQRGLEAAEHEA LL CA+P LRLLRHCLG+LS AG PP GPLD V A+ + EAALA+LPLD P + GS KP + ++ WD GAT V LALRAEAL+LSSCRLWCPP PWS LR G FLH +S H LACPANH G RLLTALLPPE P LHR+V P A XXXXXXXX +GG +GRLVGRV +AALE+SEG RRQA+ ALE+++ + +RWD C AG+++P GGG G G WR S NP+LAVTAPG +NVPAVV++LCH+ASP GRVLELA+RAV +GPMTA+ALCA+LVRSLIGCIERY+G S+P + R KDR+ SWE VCRVL V+LAV+D P SG+GRVGLLLGG IEALMPCLGLPKPEVIRS+LEVLC+FVEG RV+EVRR+S+P CSF TLATA RNVVAKW
Sbjct: 1286 DPSKEPLLLVGDLFTAPGPGEAEEGELRWEQEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDVKP-----------------------SPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWS----------------RLRR-NGXXXXXXXSFLHRVSAHALACPANHMSGARLLTALLPPESPAALHRLVLPVATAXXXXXXXXXXXXXXXXXSDGGS-------VGRLVGRVHTAAALEQSEGFRRQAVAALERRVREMLKRWDVCVAGDLFPLKEAAAAEAGPDVDGGGAGEEGTGDKSGNGAFDGXXXXXXXWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYMGQSQPLDGRSDKDREVSWESVCRVLTVILAVSDNPHSGAGRVGLLLGGVIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKW 1793
BLAST of mRNA_D-mesarthrocarpus_Contig10661.1.1 vs. uniprot
Match: A0A835ZHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG1_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.010e-38 Identity = 161/520 (30.96%), Postives = 213/520 (40.96%), Query Frame = 1
Query: 223 AAEHEAMLLACAVPTLRLLRHCLGQLSGAGLPPPSGPLDPVEAIFNLEAALALLPLDSPAHAGSFPKPPAGTASSEGGSSSVTSSNNTPLSASNKARDWDHGATEQVGLALRAEALILSSCRLWCPPY-----------------------PWSDGPPHRGGEEGTGGAAALRVITGPGARGWG----GFLHHLSTHTLACPANHAGGVRLLTALLPPECPTPLHRIVPPEALEVAGAXXXXXXXXEDGEGQEGGXXXXXXXXIGRLVGRVQVSAALERSEGLRRQALGALEQQLGALRERWDFC------AAGEVYPQGGGEDRVGVGRWAWRSSRTDNPLLAVTAPGAINVPAVVVNLCHTASPAQQGRVLELAKRAVDLGPMTAQALCAALVRSLIGCIERYIGHSKPANSRMQKDRDHS-----WEPVCRVLLVMLAVADKPRSGSGRVGLLLGGAIEALMPCLGLPKPEVIRSSLEVLCAFVEGP-RVAEVRRFSDPPCSFSTLATATRNVVAKW 1665
AA H +L V LRLLR L L G + AI + +AA+A LPL + A A T EG + AT LALRAE+LI+ CRLW PP+ DG +G AA+ G A + + H LA PA+H G +RLL ALLPP P PLHR+ P +L E E L RV+++AA+ER +GLR AL +E+ + WD AA G + R + G+I A+ +CH++SP + ++A RA G TA+ + AAL+ L C++ Y+ W PVCR L + A+AD G+ RV LLL GA+ AL+PCLGLP+PE IR++L L F G R AE RR PP SF +ATA RNV+ KW
Sbjct: 1162 AARHTRQVLGALVACLRLLRLLLRVLPRGGDDDAQLRDAVMAAILDGQAAIACLPLATAA---------ADTTLPEGCT-----------------------ATPTTVLALRAESLIVGVCRLWLPPHCCDASDXXXXXXXXXXXXXXXEAHHQDGSASPMAVDGEHIEAAVADADGDEAESSAVTAASTMQLIYKHALAAPAHHLGALRLLHALLPPAVPPPLHRL--PASLP---------------ERDE-------------LAARVRLAAAVERKDGLREAALDEVERHMAWHLHCWDLALTPAAAAASVAAASADGXXXXXXXXXXXGAPRASSD-------GSIG--ALTAAMCHSSSPQVRALAADVAARAAGAGAATARGVTAALLADLQRCVDTYLAGPAAXXXXXXXXXXXXXXAAPWLPVCRALQAVHALADAD-GGAARVALLLQGALAALLPCLGLPRPEPIRAALCALRPFCSGSGRAAEARRHGAPPTSFGVVATAARNVMGKW 1609 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10661.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10661.1.1 >prot_D-mesarthrocarpus_Contig10661.1.1 ID=prot_D-mesarthrocarpus_Contig10661.1.1|Name=mRNA_D-mesarthrocarpus_Contig10661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=555bp PPPPPPPPPPPPSLPPQPKVPTVPPPPRPKEPSREPLLLVGDLFSAPGPGback to top mRNA from alignment at D-mesarthrocarpus_Contig10661:187..4165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10661.1.1 ID=mRNA_D-mesarthrocarpus_Contig10661.1.1|Name=mRNA_D-mesarthrocarpus_Contig10661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3979bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10661:187..4165- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10661:187..4165- >mRNA_D-mesarthrocarpus_Contig10661.1.1 ID=mRNA_D-mesarthrocarpus_Contig10661.1.1|Name=mRNA_D-mesarthrocarpus_Contig10661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1665bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10661:187..4165- (Discosporangium mesarthrocarpum MT17_79)back to top |