mRNA_D-mesarthrocarpus_Contig1066.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1066.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig1066.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: D7FQL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL8_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 8.540e-143
Identity = 210/235 (89.36%), Postives = 223/235 (94.89%), Query Frame = 1 
Query:    1 QVKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            Q++  E KL++DTYRN+ EKHRRKMIEHRTTEMAV+DLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSG++ E  GKAKR SYNYRV MRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDH+NKVGLAHALAKIIS+RSKQANFQL+TITHDEEFVQTMR EL TQGGFSMPE+YWRISREE+SRGKFYSRIDRL WEDM
Sbjct:  216 QIRGYEAKLNSDTYRNIEEKHRRKMIEHRTTEMAVTDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGDD-EDSGKAKR-SYNYRVVMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHNNKVGLAHALAKIISSRSKQANFQLITITHDEEFVQTMRTELGTQGGFSMPEFYWRISREEMSRGKFYSRIDRLDWEDM 448
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7S3Y9Z4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9Z4_HETAK)

HSP 1 Score: 301 bits (772), Expect = 1.870e-101
Identity = 150/203 (73.89%), Postives = 170/203 (83.74%), Query Frame = 1 
Query:   97 MAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            MAV DL+KYWTALDKAL++FH MKI DINKIIRELW +TY G DI+ IEIVSGEEG S    +  SYNYRV M K DA LDMKGRCSAGQRVL+S+VIRLALAETFC++CGILALDEPTTNLD DNK GLA+ALAKII+ RSKQ NFQL+ ITHDEEFV  MR ELA+  GFSMPEY++R+SREEL  G+FYSRIDR  W ++
Sbjct:    1 MAVQDLEKYWTALDKALMQFHRMKIEDINKIIRELWQITYQGNDIESIEIVSGEEGTSNRAGR--SYNYRVCMTKGDAHLDMKGRCSAGQRVLSSIVIRLALAETFCLNCGILALDEPTTNLDSDNKRGLANALAKIIAARSKQTNFQLLAITHDEEFVAMMRNELASHAGFSMPEYFYRVSREELRAGRFYSRIDRNDWAEL 201
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A835YS51_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS51_9STRA)

HSP 1 Score: 303 bits (776), Expect = 3.360e-101
Identity = 154/231 (66.67%), Postives = 187/231 (80.95%), Query Frame = 1 
Query:    1 QVKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELS--RGKFYSRIDR 687
            Q ++ +++L   +Y  V EK R+K+I+  TT MAV+DL+KYWTALDKAL+R+H MKIA+INKIIRELW +TY G DIDMIEIVSGE+G S    +  SYNYRVAMRK    LDMKGRCSAGQRVLAS+VIRLALAETFC++CGILALDEPTTNLD +NK GLA ALA+II+ RS+Q+NFQL+ ITHDEEFV TMR +L +  GF+MPEYYW +SRE+     G+FYSR+ R
Sbjct:   28 QGRDLKQRLKGGSYAGVQEKRRKKLIDVETTAMAVADLEKYWTALDKALMRYHHMKIAEINKIIRELWQITYKGGDIDMIEIVSGEDGASNRAGR--SYNYRVAMRKGSTILDMKGRCSAGQRVLASIVIRLALAETFCINCGILALDEPTTNLDFENKDGLAKALARIIAQRSQQSNFQLIVITHDEEFVGTMRTQLGSIAGFNMPEYYWCVSREQTCGPSGQFYSRMTR 256
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7S2B1T5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1T5_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.900e-95
Identity = 150/238 (63.03%), Postives = 184/238 (77.31%), Query Frame = 1 
Query:    1 QVKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQ---ELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            Q+KE   +L    +R + E+ R K +E  TT MAV DLDKYW ALDKALLR+H+ KI +IN+IIRELW+ TY G+DID IEIVSGEEG S  +A R SYNYRVAMRK D TLDMKGRCSAGQRVLA +VIRLALAETFC++CGIL LDEPTTNLD  NK GLA ALA IIS R+KQ NFQ++ ITHD +FV  MR    +L TQ  F++PEYYWRI R +++ G++ S+I+R+ W+++
Sbjct:  121 QLKEIRNRLKESHFRKIHERTRLKRVEVETTVMAVEDLDKYWIALDKALLRYHSHKIQEINRIIRELWSTTYMGQDIDSIEIVSGEEGAST-RASR-SYNYRVAMRKGDTTLDMKGRCSAGQRVLACIVIRLALAETFCLTCGILTLDEPTTNLDEYNKQGLASALADIISIRAKQRNFQVIVITHDPDFVNYMRSAFNQLGTQRAFNLPEYYWRIFRSQVATGQYVSQIERIDWDEL 356
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7R9W3X1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3X1_9STRA)

HSP 1 Score: 296 bits (759), Expect = 4.720e-95
Identity = 149/235 (63.40%), Postives = 187/235 (79.57%), Query Frame = 1 
Query:    1 QVKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            Q++  + KL  + Y+++ E+HRRKMIE+ TT +AV DL+KY +ALDKALLR+H MKIADINKIIRELW +TY GEDI  I++ SG+E   G +A R SYNYRV M K  A LDM+GRCSAGQRVLAS+VIRLALAETFC++CG++ LDEPTTNLD+ NK GLA ALA+II+NR+ Q NFQLV ITHDEEFV  M+ EL+   GFSMPE Y+++SREE S GK YS+I  + W+++
Sbjct:  294 QIRSLKRKLKTEEYKDIDERHRRKMIEYETTTIAVEDLEKYHSALDKALLRYHGMKIADINKIIRELWTLTYKGEDIANIKLESGQE--KGSRAAR-SYNYRVVMTKGGAELDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMCLDEPTTNLDYANKRGLAVALAQIIANRASQTNFQLVVITHDEEFVTMMKNELSAHSGFSMPERYFQVSREEGSDGKHYSKIHAIDWDEL 525
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7S2EEH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EEH2_TRICV)

HSP 1 Score: 282 bits (721), Expect = 2.270e-93
Identity = 141/222 (63.51%), Postives = 176/222 (79.28%), Query Frame = 1 
Query:   40 YRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            Y ++ E+HR+KMIE  TT +AV+DL+KY +ALDKALLR+H MKIADINKIIRELW +TY GEDI  IE+ S ++  +G +A R SYNYRV M K    LDM+GRCSAGQRVLAS+VI+LALAETFC++CG++ LDEPTTNLD+ NK GLA ALA+II+ R+ QANFQLV ITHDEEFV  M+ EL    GF MPE Y+++SREE S GK YS+I  + W+++
Sbjct:    5 YNDIDERHRQKMIEFETTNIAVADLEKYHSALDKALLRYHGMKIADINKIIRELWTLTYKGEDITNIELASNQD--AGSRAAR-SYNYRVVMTKGSTPLDMRGRCSAGQRVLASIVIKLALAETFCLNCGVMCLDEPTTNLDYANKRGLAIALAQIIATRAAQANFQLVVITHDEEFVAMMKNELTAHTGFDMPERYFQVSREEGSDGKHYSKIHAIDWDEL 223
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7R9WT19_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT19_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.750e-92
Identity = 140/234 (59.83%), Postives = 186/234 (79.49%), Query Frame = 1 
Query:    4 VKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            ++  + KL    Y+NV E++R  MI+H TT MAV D++KY +ALD ALL+FH++KIA+IN+IIR+LW +TY GEDI  IE+VSG++  SG +A R SYNYRV M K    +DM+GRCSAGQRVLAS+VIRLALAETFCV+CG +ALDEPT NLD +NK GLA ALA+I ++RS Q+NFQL+ ITHDE+FV  M+ ELA+Q GF+MPE Y+++ REE + GK+YS+ID + W+++
Sbjct:   53 IRSLKRKLKQPEYKNVEEEYRVSMIKHETTLMAVRDIEKYHSALDHALLQFHSIKIAEINQIIRDLWRLTYKGEDITTIELVSGQD--SGARASR-SYNYRVVMTKGSTRMDMRGRCSAGQRVLASIVIRLALAETFCVNCGCIALDEPTVNLDFNNKRGLAIALAQITADRSAQSNFQLIMITHDEDFVAMMKTELASQSGFTMPEKYFQVRREEGADGKYYSKIDAIDWDEL 283
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7S2RPE9_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPE9_9STRA)

HSP 1 Score: 276 bits (707), Expect = 9.850e-91
Identity = 140/235 (59.57%), Postives = 180/235 (76.60%), Query Frame = 1 
Query:    1 QVKETEEKLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            Q ++ + KL    Y  + E+HR KMIE+ TT ++V+DLDKY +ALDKALLR+H +KI +INKIIRE+W +TY GEDI  IEIVSGEE  +  K  + SYNYRV M K +  LDM+GRCSAGQRVLAS+VIRLALAETFC++CG + LDEPTTNLD  NK GLA ALA+II+ RS Q NFQLV ITHDE+FV  M+ EL+T  GF MPE Y+++SR++ + G +YS+I  + W+++
Sbjct:   27 QQRDLKRKLQTPEYDQIDERHRIKMIEYETTVISVADLDKYHSALDKALLRYHGIKIEEINKIIREVWTLTYKGEDISNIEIVSGEE--NARKTSK-SYNYRVVMSKGNTELDMRGRCSAGQRVLASIVIRLALAETFCLNCGFMTLDEPTTNLDFANKRGLAIALAQIIATRSAQQNFQLVIITHDEDFVSMMKNELSTHTGFDMPERYFQVSRQQATDGHYYSKIHAIDWDEL 258
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A8J2S5K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S5K6_9STRA)

HSP 1 Score: 300 bits (769), Expect = 1.770e-90
Identity = 146/227 (64.32%), Postives = 182/227 (80.18%), Query Frame = 1 
Query:   25 LSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            L+   Y+ V E+HRR MI+  TTEMA  D++ YWTALDKAL  FH +KI +IN+II+ELW++TY GEDID IEIVSGE+  +G K    SYNY V MRK  A LDMKGRCSAGQRVLAS+VIRLALA+TFC+ CGILALDEPTTNLD  N+  LAH L++II++R++Q+NFQLV ITHDEEF+ T+R E+A Q G SMPE+YWRISREE+ +GKFYS+ID++  + +
Sbjct: 1221 LATARYKGVEERHRRAMIDKETTEMACKDVEHYWTALDKALGSFHRLKIEEINRIIKELWSVTYMGEDIDTIEIVSGED--NGSKRAARSYNYHVRMRKQGAALDMKGRCSAGQRVLASIVIRLALAQTFCIKCGILALDEPTTNLDEANRRSLAHGLSRIIADRARQSNFQLVVITHDEEFIATLRTEMAAQAGASMPEHYWRISREEVGQGKFYSKIDKIPMDQL 1445
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BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Match: A0A7S2PNE7_9STRA (Hypothetical protein n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNE7_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.260e-88
Identity = 142/228 (62.28%), Postives = 188/228 (82.46%), Query Frame = 1 
Query:   22 KLSNDTYRNVGEKHRRKMIEHRTTEMAVSDLDKYWTALDKALLRFHTMKIADINKIIRELWAMTYSGEDIDMIEIVSGEEGESGGKAKR*SYNYRVAMRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNLDHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGFSMPEYYWRISREELSRGKFYSRIDRLVWEDM 705
            KL+ + Y++V ++HR KMI++ TT + V DLDKY+ ALDKALLRFH +KI +INKIIRELW +TY G+DI  I+IVSG+E  S  +A R SYNYR+ M K ++ +DM+GRCSAGQRVLAS+VIRLALAETFC++CG++ALDEPTTNLDH+NK GLA ALA+II++R+ Q+NFQLV ITHDE+FV  M+ EL++Q GF+MPE Y+++SREE   GKFYS+I  + W+++
Sbjct: 1103 KLNEEEYKDVEKRHRAKMIDYETTNLVVQDLDKYYDALDKALLRFHGIKIGEINKIIRELWTLTYKGQDITSIQIVSGQE--SSARANR-SYNYRIVMEKGNSQMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMALDEPTTNLDHENKKGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQTGFTMPERYYQVSREEGHDGKFYSKISAVDWDEL 1327
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1066.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQL8_ECTSI8.540e-14389.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y9Z4_HETAK1.870e-10173.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YS51_9STRA3.360e-10166.67P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2B1T5_9STRA2.900e-9563.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9W3X1_9STRA4.720e-9563.40Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2EEH2_TRICV2.270e-9363.51Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9WT19_9STRA1.750e-9259.83Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2RPE9_9STRA9.850e-9159.57Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A8J2S5K6_9STRA1.770e-9064.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2PNE7_9STRA2.260e-8862.28Hypothetical protein n=3 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1066contigD-mesarthrocarpus_Contig1066:414..3151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQL8
Preferred nameRAD50
PFAMsAAA_23,Rad50_zn_hook,SbcCD_C
Model size708
Max annot lvl2759|Eukaryota
KEGG koko:K10866
KEGG Pathwayko03440,ko03450,ko04218,map03440,map03450,map04218
KEGG ModuleM00291,M00292,M00295
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000075,GO:0000077,GO:0000166,GO:0000228,GO:0000278,GO:0000280,GO:0000706,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000727,GO:0000729,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003691,GO:0003697,GO:0003824,GO:0004003,GO:0004017,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006278,GO:0006281,GO:0006284,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007346,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009165,GO:0009892,GO:0009987,GO:0010520,GO:0010564,GO:0010605,GO:0010705,GO:0010833,GO:0016043,GO:0016233,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019205,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0022402,GO:0022414,GO:0023052,GO:0030554,GO:0030674,GO:0030870,GO:0031297,GO:0031323,GO:0031324,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032069,GO:0032070,GO:0032071,GO:0032074,GO:0032076,GO:0032078,GO:0032200,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033043,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0035753,GO:0035825,GO:0035861,GO:0036094,GO:0040020,GO:0042138,GO:0042162,GO:0042592,GO:0042623,GO:0042769,GO:0042770,GO:0043047,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043570,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044773,GO:0044774,GO:0044786,GO:0045005,GO:0045786,GO:0045930,GO:0045934,GO:0046483,GO:0046940,GO:0048285,GO:0048519,GO:0048523,GO:0050145,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051171,GO:0051172,GO:0051276,GO:0051321,GO:0051336,GO:0051346,GO:0051445,GO:0051606,GO:0051716,GO:0051726,GO:0051783,GO:0051880,GO:0055086,GO:0060090,GO:0060249,GO:0060255,GO:0060631,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070192,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0072395,GO:0072401,GO:0072422,GO:0080090,GO:0090304,GO:0090305,GO:0090407,GO:0090734,GO:0097159,GO:0097367,GO:0097551,GO:0097552,GO:0098687,GO:0098847,GO:0110025,GO:0140013,GO:0140097,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902298,GO:1902969,GO:1903046,GO:1903047,GO:1903211,GO:1990426,GO:1990505,GO:1990898,GO:1990918,GO:2000241
Exons6
Evalue1.7e-80
EggNOG OGsCOG0419@1|root,KOG0962@2759|Eukaryota
DescriptionG-quadruplex DNA binding
Cds size396
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1066.1.1prot_D-mesarthrocarpus_Contig1066.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1066 1814..3151 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789201.0994794-UTR-D-mesarthrocarpus_Contig1066:413..5541680789201.0994794-UTR-D-mesarthrocarpus_Contig1066:413..554Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1066 414..554 +
1680789201.1258802-UTR-D-mesarthrocarpus_Contig1066:1016..11651680789201.1258802-UTR-D-mesarthrocarpus_Contig1066:1016..1165Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1066 1017..1165 +
1680789201.1379566-UTR-D-mesarthrocarpus_Contig1066:1791..18131680789201.1379566-UTR-D-mesarthrocarpus_Contig1066:1791..1813Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1066 1792..1813 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789201.1466668-CDS-D-mesarthrocarpus_Contig1066:1813..18761680789201.1466668-CDS-D-mesarthrocarpus_Contig1066:1813..1876Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1066 1814..1876 +
1680789201.160356-CDS-D-mesarthrocarpus_Contig1066:2218..23201680789201.160356-CDS-D-mesarthrocarpus_Contig1066:2218..2320Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1066 2219..2320 +
1680789201.173671-CDS-D-mesarthrocarpus_Contig1066:2724..28111680789201.173671-CDS-D-mesarthrocarpus_Contig1066:2724..2811Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1066 2725..2811 +
1680789201.1840255-CDS-D-mesarthrocarpus_Contig1066:3007..31511680789201.1840255-CDS-D-mesarthrocarpus_Contig1066:3007..3151Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1066 3008..3151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1066.1.1

>prot_D-mesarthrocarpus_Contig1066.1.1 ID=prot_D-mesarthrocarpus_Contig1066.1.1|Name=mRNA_D-mesarthrocarpus_Contig1066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=132bp
MRKNDATLDMKGRCSAGQRVLASVVIRLALAETFCVSCGILALDEPTTNL
DHDNKVGLAHALAKIISNRSKQANFQLVTITHDEEFVQTMRQELATQGGF
SMPEYYWRISREELSRGKFYSRIDRLVWEDM*
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mRNA from alignment at D-mesarthrocarpus_Contig1066:414..3151+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1066.1.1 ID=mRNA_D-mesarthrocarpus_Contig1066.1.1|Name=mRNA_D-mesarthrocarpus_Contig1066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2738bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1066:414..3151+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGAAGGAGACGGAGGAGAAGCTGTCGAATGACACGTACCGCAATGT
GGGTGAGAAGCACCGGCGGAAGATGATTGAGCACCGGACCACCGAGATGG
CTGTGTCAGATCTGGATAAATACTGGACAGCCCTGGACAAGGTGCCTAAC
ATAGGCCCTTAAAAGTTCCGGTGGAGGGGGGAGGGCGGAGTGGCAAAGCT
GTGCTGTCATGATGGGGGGGTGAAATTCGCCTGCTAGGAGACTTGTGCTC
TGCTTTGCGCTGTTTTTCTAGTTGCCGAACCAGGTTTGCATTTCCTGTTG
CAGACCTACGATGAAGTTCGTCGTGGGGTGGTGAGGGTCCTCTTCTGTTA
TGCCCAAATGTGACCTTCGTCCATGTTGTCTTTTTGATGTACTTCGTGCT
CGGGAGTGCTAGTTATCGTTCTTTTTATACCTTGACCAGCAGAAAATCGC
ACGAAAAGTCAACCTTCCCATCCACTGCAACATTGTGCAGTGGCTCCACT
GAAAATCCTTTTCCCCTCTGCCCTCACTCCGTCCTCTTCCATGGCATCAT
TGTCACATGCCTATTGCCATGGTGCCGACGAATGCTTCATTCGAAAACAA
AAGGCTCTGCTGCGCTTCCACACCATGAAGATCGCCGATATCAACAAGAT
CATCCGCGAGCTGTGGGCGATGACCTACTCGGGGGAGGACATCGACATGA
TCGAGATTGTCTCCGGGGAAGAGGGGGAGTCTGGGGGCAAGGCAAAGAGG
TAGTCCGTGGCGCGCTTGCGTTTCAATGCCCTCACGAGGGCTCACGTCAC
ACTACGTCCTTTGTAGTATACACGCACTATATAGCCACTTCGTACGAAAG
TCTCCCTTGGATTTCCTTAACACGTTTCGTTTAGATAGTCCCATAGTTTC
TGTGAGAGATGCCGCGCGACTGCCCCCGGTTGTACTACTACGAAGGAAAA
AGAGTTCAAATAGATTCACCACGCCACTGTTTGTGGAGACGGGGGCCTCA
ACCGTAACCCCCACTCTTTCCTTAGCCCTAGGTTCACCGCGTTGTGCGTG
CACTGCATTTACTCCGTACTCCCTGTCTTTCAAGCCCTGGACTAGACACG
TCCAGCGACCCTTCATGACACACGACGAGCACGCGTCACGCGGCGAGAAC
CCCTCCCTAAATCTAACCCTAATTCTTGACGTAACTCTTACTCTAACATT
TCCCCGCTGCCTCTTGGTACCCCGTTTGCCATCCATCGTCCGTGCTTCCA
GCCCTGGATTCACCCCTTAGTTTCTTATCCCTGCAGTTGCCGTTCCCTCG
CTGTCGTGCCTAGATAGAGTATAGCGGCTGATACGTAACGTAGCCTTGAT
ACCGCCTTTTTTATCTCGCTTCCCGTAGGTCTTATAACTACCGCGTGGCG
ATGAGGAAGAATGATGCCACACTGGACATGAAGGGTCGCTGCAGCGCTGG
GCAGAGGGTCCTGGTGAGAACATGATCTGGAAACAGGGAGCTTTCTTGTC
GTGTAAGTTGTAGATACCCACCCCACCTTGACCCCCCCATTGTATAGATC
TGAGCGTTGCTATTTCGAAGGAAATTGTTCATTTGGTAAAGACTACTAGT
ATGCAACAGTGCTGTAGAGTGAGATGAAGAACCTTAGAAATGCTTTCACG
GATGGGTTCTTTGTTGTCCTCGAGGCTGCTTGATCCCAGAAGAACTGTGT
TTTTGAGTTCCTTCATCCGGCGCGCTTTGCTTGTTGCCAAACCCGTCCAC
ATGCTAACCAACCTTCCGGGTTGCGCGTTTGGAAACACGATGCACACCGC
AACAGGCAAGCGTGGTCATCCGTCTGGCTCTGGCCGAGACTTTCTGTGTC
AGCTGCGGGATCCTAGCCCTCGATGAGCCTACCACCAACTTGGATCACGA
CAATAAAGTGCGTGGGTGCTGGCGACGGGTGCAGGAGGACAGATGGTTCA
TTGTTGGGCGTTTCATGGCGTGGTTTTATTACTTTCCATAAGACAGAGCT
CTGCTGCAGAAAGCTGCGTGCAATTCAGTGGTTGTTATGAGGAGGGTCGT
CGAGTCGTTTCAGTTTCCTGCGGTATGGATGCATAACGGGATTTAGTCCC
TCGATTCCTTTTCATGTACAGAGGGTCTCACATAGCCACATACTTCATTT
GAGGAATCTTAGCGACGCGCAGAAAATATGTTCACATGAAAACTTGTCAC
ACACTTCCTGCTGGCTCAGCTGGTTCTCTTCGACCCTCATACATGTCATA
ACTTTGAGCTGACCGTCCCATCAAACCTTGCCCGTCAAATGCCCGATGTG
AAACAACGAAGGTCGGCCTCGCCCATGCCCTTGCCAAGATAATCAGCAAC
CGATCCAAGCAGGCTAACTTCCAGCTTGTTACCATCACTCACGATGAGGT
GCGGTGTGTTGTGGCGCATATAAGATGCACCCTTCGGAAGGAGATAAGAC
CCACTTATTAAAGAGAGGTCTTCGAACCAATTTAGCCCTGAACATCTAAA
GACGTATGCCTCGCGCGAAACTACTTATTTTGCCCAAAATTCGAAATGCT
CCTCGCCTAAACTTTAAACACTCCCCCACGTCCCTCCTGTCCAGGAATTT
GTTCAGACAATGCGACAAGAGCTGGCCACACAGGGTGGCTTCTCTATGCC
AGAGTATTACTGGAGGATATCCCGCGAGGAGCTTTCGAGAGGGAAATTCT
ACAGTCGCATTGACCGGCTGGTGTGGGAGGATATGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1066:414..3151+

>mRNA_D-mesarthrocarpus_Contig1066.1.1 ID=mRNA_D-mesarthrocarpus_Contig1066.1.1|Name=mRNA_D-mesarthrocarpus_Contig1066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=396bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1066:414..3151+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGAAGAATGATGCCACACTGGACATGAAGGGTCGCTGCAGCGCTGG
GCAGAGGGTCCTGGCAAGCGTGGTCATCCGTCTGGCTCTGGCCGAGACTT
TCTGTGTCAGCTGCGGGATCCTAGCCCTCGATGAGCCTACCACCAACTTG
GATCACGACAATAAAGTCGGCCTCGCCCATGCCCTTGCCAAGATAATCAG
CAACCGATCCAAGCAGGCTAACTTCCAGCTTGTTACCATCACTCACGATG
AGGAATTTGTTCAGACAATGCGACAAGAGCTGGCCACACAGGGTGGCTTC
TCTATGCCAGAGTATTACTGGAGGATATCCCGCGAGGAGCTTTCGAGAGG
GAAATTCTACAGTCGCATTGACCGGCTGGTGTGGGAGGATATGTGA
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