mRNA_D-mesarthrocarpus_Contig10652.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A397E722_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E722_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.850e-20 Identity = 63/200 (31.50%), Postives = 99/200 (49.50%), Query Frame = 1
Query: 1 VRKGVRGHDVDTPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRPNRK----------------------WAVKSGTPLSSLWRLCKRVGARKHKRWVKPVLS-----DKQKRDRVGFALSHMRR-KGGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEED 516
+R+ HD+ + S+ L+ + + LPYG GK++ Q+ G+S+ T+ + K KA +++ ++GRCG P R+ AV SG ++LWRL + R+ +KP+++ DK K DRV FA S +R+ + G+ + DM D VH+DEKWFYV R YL +ED
Sbjct: 1 MRRATTKHDIPNDQRLSLYHELLQHKENGR-LPYGKGKELMQQYGLSKQTLSKIWKAGQESKARTGLANIANKKKGRCGHPRRRSIKDLEVAIKAVPPHSRLTLRSLAVSSGIAPTTLWRLLQSKKLRRRTSHLKPMVTEPMVTDKHKADRVVFARSFLRQCRDGM--MWHDMMDRVHIDEKWFYVTMVKRRYYLWHDED 197
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A6A4ZZC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZC0_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.060e-20 Identity = 65/202 (32.18%), Postives = 101/202 (50.00%), Query Frame = 1
Query: 1 VRKGVRGHDVDTPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRPNRK----------------------WAVKSGTPLSSLWRLCKRVGARKHKRWVKPVLS-----DKQKRDRVGFALSHMRR-KGGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
+R+ HD+ + S+ L+ + + LPYG GK++ Q+ G+S+ T+ + K KA +++ ++GRCGRP R+ AV SG ++LWRL + R+ +KP+++ DK K DRV FA S +R+ + G+ + DM D VH+DEKWFYV R YL +ED P
Sbjct: 1 MRRATTKHDIPNDQRLSLYHELLQHKENGR-LPYGKGKELMQQYGLSKQTLSKIWKAGQESKARTGLANVAIKKKGRCGRPRRRSIKDLEVAIKAVPAHLRLTLRSLAVSSGIAPTTLWRLLQSKKLRRRTSHLKPMVTEPMVTDKHKADRVVFARSFLRQCRDGM--MWHDMMDRVHIDEKWFYVTMVKRRYYLWHDEDLP 199
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A6A5ATA6_9STRA (HTH_Tnp_Tc3_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ATA6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.570e-18 Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 22 HDVDTPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGR-PNRKW---------------------AVKSGTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRKGGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
HD+ + + L + + +LP G K++ + G+SR T+ + + KA D++ ++GRCGR P+R AV SG P ++LWR+ + ++ +KP++++K K DR+ FA S + +V DMYD VH+DEKWFY+ + R YL +E P
Sbjct: 8 HDLPNDQRLGLYHELLVHK-VNGRLPKGKAKELLAQYGVSRQTVSKIWRRGQRSKARNGLADVALKKKGRCGRRPSRTMSDIETAIKSVPPVLRRTFESLAVSSGIPRTTLWRVLQTKKLQRRTSRLKPMVTEKHKADRLAFARSFVHGTSCNGMVWHDMYDRVHIDEKWFYLTEVNRRYYLWHDESTP 195
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: W4H8J1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8J1_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.820e-16 Identity = 61/197 (30.96%), Postives = 93/197 (47.21%), Query Frame = 1
Query: 1 VRKGVRGHDVDTPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRPNRK----------------------WAVKSGTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRR-KGGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
+R+ HD+ + S+ L+ + + LPYG GK++ Q+ G+S+ T+ + K KA +++ ++GRCGRP R+ AV SG ++LWRL + S K + DRV FA S +R+ + G+ + DM D VH+DEKWFYV R YL +ED P
Sbjct: 1 MRRATTKHDIPNDQRLSLYHELLQHKENGR-LPYGKGKELMQQYGLSKQTLSKIWKAGQESKARTGLANVANKKKGRCGRPRRRSIKDLEVAIKAVPPHLRLTLRSLAVSSGIAPTTLWRL---------------LQSKKLRPDRVVFARSFLRQCRDGM--MWHDMMDRVHIDEKWFYVTMVKRRYYLWHDEDLP 179
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A8I6XKP1_HORVV (Uncharacterized protein n=4 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XKP1_HORVV) HSP 1 Score: 77.4 bits (189), Expect = 6.210e-14 Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 1
Query: 112 KDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRP--------------NRKWAVKS-----GTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRK--GGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
K++ G I R +T +QK GQ +D+S R+G CGR N++ ++S G ++L++ K R+H VKP+L++K KRDRV F LS + G + M++ VH+DEKWF + K R YL P+E+ P
Sbjct: 20 KEVVALFGAHVRVIQRIWETAMIQKGLGQEVDVSNKRKGNCGRKPYDDILSLIPTIPLNKRSTIRSLAKALGVSPTTLYKKFKLKKIRRHSNSVKPLLTEKHKRDRVEFCLSMLDEATLGDVSPSFRSMHNIVHIDEKWFCMTKKKRNYYLLPDEEDP 177
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: UPI00125D190E (uncharacterized protein LOC116027098 n=2 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125D190E) HSP 1 Score: 77.0 bits (188), Expect = 2.670e-13 Identity = 55/180 (30.56%), Postives = 85/180 (47.22%), Query Frame = 1
Query: 43 KNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRP--------------NRKWAVKS-GTPLS----SLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRKGGIR-VVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
K S++ L + + K+ YGS KD+A +S T+ R K A+G +D+S G GR NR+ ++S + LS SL R K + H KP+L+++ ++ R+ F +S + DMYD VH+DEKWF++ + + YL PEED P
Sbjct: 22 KRSVIFETLLKHSVNGKVKYGSIKDVANVYSVSTRTVSRIWKKGIACVANGVPVDISLNLSGNVGRKRIAINPEDVARIPLNRRTTIRSMASALSMSKTSLHRRVKEGSLKSHSNATKPMLTEENRKVRLQFCISMIDSSSSHNNPSFIDMYDCVHIDEKWFFLSRTSQKYYLLPEEDKP 201
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: UPI00188F83A1 (uncharacterized protein LOC119300137 n=2 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI00188F83A1) HSP 1 Score: 76.3 bits (186), Expect = 4.750e-13 Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 1
Query: 112 KDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRP--------------NRKWAVKS-----GTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRK--GGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
KD+A G I R +T QK GQ +D+S R+ CGR N++ ++S G ++L++ K R+H VKPVL++K KRDRV F LS + G + M++ VH+DEKWF + K R YL P+E+ P
Sbjct: 67 KDVAAIFGAHVRVIQRIWETAMKQKGLGQEVDVSNKRKENCGRKSYDDILSLIPTIPLNKRSTIRSLAKALGVSPTTLYKKFKLNKIRRHSNRVKPVLTEKNKRDRVDFCLSMIDEATLGDVSPSFRSMHNIVHIDEKWFSMTKRKRNYYLLPDEEDP 224
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A6D2JVH0_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JVH0_9BRAS) HSP 1 Score: 75.9 bits (185), Expect = 6.040e-13 Identity = 50/176 (28.41%), Postives = 83/176 (47.16%), Query Frame = 1
Query: 55 VARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRPN-------------------RKWAVKSGTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRKG-GIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
V R L +R + L G+ K++A + + ++ + + ++G+++D+S R+G+CGR R AV S++ R K R+H +KP L D K+ RV F LS + + + DM++ +H+DEKWFY+ K YLHP E+ P
Sbjct: 9 VYRALLQRSNNGVLKRGTTKEVANLLAVPKQSVQKIWRRAKDNVSNGEAVDVSHRRKGKCGRKPKEIDLEQIFNIPLHCRTTMRSIAVVLEVSPSTIHRYVKHGLVRRHSNAIKPTLKDDNKKARVKFCLSMLDKNTFSHQPKFVDMFNIIHIDEKWFYMTKKSTTYYLHPLEEDP 184
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 74.7 bits (182), Expect = 1.610e-12 Identity = 58/188 (30.85%), Postives = 86/188 (45.74%), Query Frame = 1
Query: 34 TPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFR----HLKTYDLQKADGQSMDMSRGRQGRCGRP----------------NRKWAVKS-----GTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRKGGIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
TPT+ + L R + ++ G + R+TI R H KT Q + + +++ G G CGR +R+ +KS G + + RL K R+H VKP L+++ + RV FALSH RK G +V DM+D VH+DEKWF D + YL +E+ P
Sbjct: 7 TPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKT---QTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEP 191
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Match: A0A6P6VMR6_COFAR (uncharacterized protein LOC113724538 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6VMR6_COFAR) HSP 1 Score: 72.4 bits (176), Expect = 3.650e-12 Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 1
Query: 34 TPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTIFRHLKTYDLQKADGQSMDMSRGRQGRCGRPN-------------------RKWAVKSGTPLSSLWRLCKRVGARKHKRWVKPVLSDKQKRDRVGFALSHMRRKG-GIRVVVDDMYDWVHVDEKWFYVMKDGRGIYLHPEEDAP 522
T + M+ L + KL G+ ++IA S T+ R K + DG+ +D+SR RCGR R + + S+L R K R H +KP L+D+ K+ R+ F LS + + M++ VH+DEKWFY+ K+ + YLHP+E+ P
Sbjct: 17 TNQERQMIFEALLQESNGGKLKRGTIRNIASLFKTSVRTVQRIWKLAAITSTDGR-VDVSRRFSKRCGRKRVDIDFTLIMAIPLRRRTNIRSLSSEMKVSKSTLHRRIKEGAIRPHSNALKPQLTDQNKQVRLNFCLSMLEPESLNSNPTFMSMFNVVHIDEKWFYMTKECKKYYLHPQEEEP 198 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10652.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10652.2.1 >prot_D-mesarthrocarpus_Contig10652.2.1 ID=prot_D-mesarthrocarpus_Contig10652.2.1|Name=mRNA_D-mesarthrocarpus_Contig10652.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp VRKGVRGHDVDTPTKNSMVARCLERRGTSKKLPYGSGKDIAQECGISRTTback to top mRNA from alignment at D-mesarthrocarpus_Contig10652:3592..4161+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10652.2.1 ID=mRNA_D-mesarthrocarpus_Contig10652.2.1|Name=mRNA_D-mesarthrocarpus_Contig10652.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=570bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10652:3592..4161+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10652:3592..4161+ >mRNA_D-mesarthrocarpus_Contig10652.2.1 ID=mRNA_D-mesarthrocarpus_Contig10652.2.1|Name=mRNA_D-mesarthrocarpus_Contig10652.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=522bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10652:3592..4161+ (Discosporangium mesarthrocarpum MT17_79)back to top |