mRNA_D-mesarthrocarpus_Contig1065.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1065.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig1065.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: D7G0Q0_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q0_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 1.800e-102
Identity = 168/186 (90.32%), Postives = 176/186 (94.62%), Query Frame = 1 
Query:  271 WRFQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQAS 828
            WRFQPLLVPPPTLQEDMR+LVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESE G EIEIKDVSH+VFLKLLEYLYTD L +VTA+QAVHLLVASEQYLL RLK+LCEEAIR SITV+ VCT+FLLAHKHNAEGLKEIALDF+LDNMEGVK TA FLELKQEPDLLMEII RQAS
Sbjct:  313 WRFQPLLVPPPTLQEDMRKLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESEKGAEIEIKDVSHAVFLKLLEYLYTDTLSDVTANQAVHLLVASEQYLLARLKTLCEEAIRTSITVDTVCTIFLLAHKHNAEGLKEIALDFVLDNMEGVKDTAGFLELKQEPDLLMEIIFRQAS 498
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A7S2UT53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT53_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.490e-81
Identity = 149/269 (55.39%), Postives = 180/269 (66.91%), Query Frame = 1 
Query:   13 GKVPTQRYFHACAVHNGSMYVFGGYNGTDRLCDFYQHDFATGAWRQLESHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWRFQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILR 819
            G+VP+ R      VH  S+YVFGGYNG   L DFY                                                  E+RF+PL +P PTL  D+R L+NNRELSDVTFIVDGFPVYASR HLA+RSEHFRAMLYGGMRES+S +EIEIKDVSH VFLK+LE+LYTD + ++  + AV LL+ASEQYLL RLK+LCE++IRKSITV+NV +VF+ AH+H AEGLKEI L+FILD++E VK +  F  LK EPDLLMEII++
Sbjct:    5 GEVPSGRSSLVAQVHENSLYVFGGYNGQVVLNDFY--------------------------------------------------EYRFEPLNIPGPTLINDLRSLINNRELSDVTFIVDGFPVYASRAHLAVRSEHFRAMLYGGMRESQS-EEIEIKDVSHPVFLKMLEFLYTDTVEDIPYEIAVQLLMASEQYLLDRLKALCEDSIRKSITVDNVISVFMAAHRHRAEGLKEIGLEFILDHLEDVKMSTGFQLLKAEPDLLMEIIMK 222
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A835YYB0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB0_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.000e-75
Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 1 
Query:  280 QPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQ 822
            +PLLVPP TL  D+R +VN RELSDVTF+VDGFPV+ASR HLA RSEHFRAMLYGG+RES++G EIE+KDVSH+VFLK+LEYLYTD +G++  D AV LL+ASE+YLL RLK+LCEE+IRK +TVENV  VFL AHKHNAEGLKEI LD+ILDN+E VK T  F ELK EPDLL EII+ Q
Sbjct:  331 EPLLVPPSTLAADLRGMVNCRELSDVTFLVDGFPVFASRAHLAARSEHFRAMLYGGLRESQAGCEIEVKDVSHAVFLKMLEYLYTDTVGDLAPDLAVQLLMASERYLLDRLKALCEESIRKGVTVENVVGVFLTAHKHNAEGLKEICLDYILDNLEAVKGTQSFNELKSEPDLLFEIIMAQ 511
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A7R9UG27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG27_9STRA)

HSP 1 Score: 239 bits (610), Expect = 4.410e-70
Identity = 134/274 (48.91%), Postives = 165/274 (60.22%), Query Frame = 1 
Query:    7 LTGKVPTQRYFHACAVHNGSMYVFGGYNGTDRLCDFYQHDFATGAWRQLESHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWRFQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQAS 828
            L G VP+ R      VH  S+Y+FGGYNG + L DFY                                                  E+RFQ L + P     +MR LVNN+  SDVTFIVDG P+YA+R HLA R EHFRAMLYG MRE+ S +EI I D+ H  FLKLLEYLYTDQ+ ++TA+ A  LL+A+EQYLL RLK +CE  IR+SITVENV  +F+ AH+HNA  L+EI L++IL N+E VK T  F ELK EP+LLMEII+RQ +
Sbjct:   16 LEGDVPSGRSSLVAQVHRNSLYIFGGYNGKEVLNDFY--------------------------------------------------EYRFQHLSIAPSAFLSEMRSLVNNQMFSDVTFIVDGIPIYATRAHLAARCEHFRAMLYGEMREASS-EEIVIHDIRHDTFLKLLEYLYTDQVEDLTAESATPLLIAAEQYLLERLKGICEGIIRQSITVENVIGIFMAAHRHNALRLREIVLEYILANLEDVKRTRHFQELKDEPELLMEIIMRQQT 238
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A7S1U372_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U372_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.520e-65
Identity = 118/182 (64.84%), Postives = 148/182 (81.32%), Query Frame = 1 
Query:  283 PLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQAS 828
            P+ +PP +L  D+R L+NN++ SDVTFIV G PVYA+R HLA RSEHFRAMLYGGMRE+ + +EI+I DVSH VFLKLLEYLYTDQ+ E++A+ AV LL+A+EQYLL RLK +CE+ IRKSI  ENV  +F+ AH+HNA+GL+EI L+FIL N+E VK T  F ELK EP+LLMEII+RQ +
Sbjct:  331 PVAIPPSSLVADLRSLINNKDFSDVTFIVGGEPVYATRAHLAARSEHFRAMLYGGMREANA-EEIQIHDVSHDVFLKLLEYLYTDQVEELSAETAVALLIAAEQYLLDRLKGICEDTIRKSIAAENVIGIFMAAHRHNAQGLREIGLEFILANLEEVKRTKGFQELKDEPELLMEIIMRQQN 511
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A7S2WPN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPN5_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.090e-63
Identity = 126/282 (44.68%), Postives = 166/282 (58.87%), Query Frame = 1 
Query:    1 PGLTGKVPTQRYFHACAVHNGSMYVFGGYNGTDRLCDFYQHDFATGAWRQL------ESHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWRFQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQAS 828
            P L   VP+ RYFHACA++   +YVFGGYNGT+RL D + + F T  W ++      E                                     E+R +P+ +P  T   DMR LVNNRELSDVTF+V+G  VYASR+HLA RSEHFRAML+GGMRES SG EIE+  +SH+VF+K+LE+LYTD + ++  D AV LL+A+EQYLL RLK LCE+ IR+ ++V N                      FIL+++E +K    FL+LK EP+LLMEI++   S
Sbjct:  248 PCLGDSVPSPRYFHACAMYRNKIYVFGGYNGTERLNDLFSYSFDTQRWSKIHDEAEVEMESEMPSGRSSLVSQVYGNSLVIFGGYNGQVVLNDYYEYRLEPVWIPESTYVTDMRTLVNNRELSDVTFLVEGQAVYASRIHLAARSEHFRAMLFGGMRESSSG-EIELPGLSHAVFIKILEFLYTDTVTDIPPDVAVPLLIAAEQYLLERLKGLCEDYIRRGVSVGNAXXXXXXXXXXXXXXXXXXXXXFILEHLEEIKQEPAFLDLKSEPELLMEILMSATS 528
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A2R5GK91_9STRA (Kelch domain-containing protein 10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK91_9STRA)

HSP 1 Score: 219 bits (558), Expect = 5.800e-59
Identity = 147/272 (54.04%), Postives = 184/272 (67.65%), Query Frame = 1 
Query:   13 GKVPTQRYFHACAVHNGSMYVFGGYNGTDRLCDFYQHDFATGAWRQLESHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWRFQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQAS 828
            G  P  RYFHAC +H    YVFGGY G  RL D +Q  F T  WRQL+  G           XXXXXXXXXXXXXXXXXXXXXXX      + V PP L  D+ +L+++   SDVTF+V+  PV A R  LA RSEHFRA+L+GGMRE +  + IE+ D+ + VF  ++EYLYTD + EVT + AV LLVASE+Y+L RLKSLCE AI KSIT  N   + L A+ +NA+ LK I LDFI+DN+  +++T +F ELKQEP+LLMEII+R + 
Sbjct:  261 GYRPIGRYFHACGIHGDLFYVFGGYQGAQRLNDMHQFSFTTRTWRQLKITGEVPSGRSSLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXLSINVEPPRLTSDLAKLIDHELFSDVTFMVENRPVRAVRALLAARSEHFRALLFGGMRE-DLAKVIELPDIQYDVFRAVVEYLYTDAV-EVTPELAVPLLVASERYILPRLKSLCEVAIFKSITPVNCVQILLQAYMYNADSLKNICLDFIVDNIVALRATPEFQELKQEPELLMEIIMRSSG 530
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A7S1A9A8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9A8_NOCSC)

HSP 1 Score: 206 bits (524), Expect = 1.630e-54
Identity = 98/182 (53.85%), Postives = 139/182 (76.37%), Query Frame = 1 
Query:  280 QPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQE-IEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQ 822
            +P+ +PP  L  D+R+L+NN   +DVTF+V+  PVYA+R HLA RSEHFRA+ YGGMRES   +E I + D++H VFL LLEY+YTDQ+G++ +D AVHLL+A+E++LL RLK+LCE+ IRK I+++NV  + + A  H AEGLK+I +DFI+ N E +K+T  F EL QEP L+ E+++R+
Sbjct:  332 EPVSIPPSNLVNDLRKLINNPAFADVTFLVESQPVYATRAHLAARSEHFRALFYGGMRESSGTEEQIVLPDIAHPVFLLLLEYIYTDQVGDINSDLAVHLLIAAERFLLDRLKALCEDIIRKCISIDNVVQIMMAAKAHRAEGLKDICMDFIISNEEKIKTTPAFRELIQEPTLMYELLMRR 513
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A812K7F3_9DINO (Lztr1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812K7F3_9DINO)

HSP 1 Score: 206 bits (523), Expect = 1.980e-54
Identity = 98/182 (53.85%), Postives = 141/182 (77.47%), Query Frame = 1 
Query:  280 QPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQE-IEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQ 822
            +P+ +PP  L +D+R+L+NN   +DVTF+V+   VYA+R HLA RSEHFRA+ YGGMRES   +E I ++DV+H VFL LLEY+YTDQ+GE++++ AVHLL+A+E++LL RLK+LCE+ IRKSI+++NV  + + A  H A+GLK+I +DFI+ N E +K T  F EL QEP L+ E+++R+
Sbjct:  328 EPVSIPPSNLVDDLRKLINNPAFADVTFVVENQSVYATRAHLAARSEHFRALFYGGMRESSDAEEQIVLQDVAHPVFLLLLEYIYTDQVGEISSELAVHLLIAAERFLLDRLKALCEDIIRKSISIDNVVQIMMTAKAHRADGLKDICMDFIITNEEKIKPTPAFKELIQEPTLMYELLMRR 509
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BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Match: A0A6U6MZ52_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U6MZ52_9DINO)

HSP 1 Score: 204 bits (520), Expect = 5.620e-54
Identity = 103/184 (55.98%), Postives = 140/184 (76.09%), Query Frame = 1 
Query:  277 FQPLLVPPPTLQEDMRRLVNNRELSDVTFIVDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQE--IEIKDVSHSVFLKLLEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVCTVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIILRQ 822
            F+P+L+PP  L +D+R+L+NN   +DVTF+V+   VYA+R HLA RSEHFRA+LYGGMRES S  +  I I D+SHSVFL LLEY+YTDQ+ +V +  AV LL+A+E++LL RLK+LCE+ IRKSI++ENV  V + A  H AEGLK+I +DFI+ N E +K+T  F EL  EP L+ E+++R+
Sbjct:  331 FEPVLIPPSILMDDLRKLINNPMFADVTFLVENQTVYATRAHLASRSEHFRALLYGGMRESSSTSQEPIVIPDISHSVFLLLLEYIYTDQISDVGSKMAVPLLIAAERFLLDRLKALCEDIIRKSISIENVVQVMMTAKVHRAEGLKDICMDFIVTNEEKIKTTPAFRELIAEPTLMYELLMRR 514
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1065.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Q0_ECTSI1.800e-10290.32BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2UT53_9STRA1.490e-8155.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YYB0_9STRA1.000e-7572.93BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7R9UG27_9STRA4.410e-7048.91Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U372_9STRA1.520e-6564.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WPN5_9STRA1.090e-6344.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5GK91_9STRA5.800e-5954.04Kelch domain-containing protein 10 n=1 Tax=Hondaea... [more]
A0A7S1A9A8_NOCSC1.630e-5453.85Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A812K7F3_9DINO1.980e-5453.85Lztr1 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A6U6MZ52_9DINO5.620e-5455.98Hypothetical protein n=2 Tax=Brandtodinium nutricu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1065contigD-mesarthrocarpus_Contig1065:18356..24364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps28038
PFAMsBTB,Kelch_1
Model size2316
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.92e-63
EggNOG OGs29I5W@1|root,2RRCX@2759|Eukaryota,2XB7R@2836|Bacillariophyta
Ec32 ortholog descriptionKelch-type beta propeller
Ec32 orthologEc-09_001240.1
DescriptionKelch motif
Cds size765
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1065.4.1prot_D-mesarthrocarpus_Contig1065.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1065 19841..24298 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789200.5163732-UTR-D-mesarthrocarpus_Contig1065:18355..198401680789200.5163732-UTR-D-mesarthrocarpus_Contig1065:18355..19840Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1065 18356..19840 -
1680789200.62149-UTR-D-mesarthrocarpus_Contig1065:24298..243641680789200.62149-UTR-D-mesarthrocarpus_Contig1065:24298..24364Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1065 24299..24364 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789200.5364206-CDS-D-mesarthrocarpus_Contig1065:19840..199601680789200.5364206-CDS-D-mesarthrocarpus_Contig1065:19840..19960Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 19841..19960 -
1680789200.548355-CDS-D-mesarthrocarpus_Contig1065:20566..206841680789200.548355-CDS-D-mesarthrocarpus_Contig1065:20566..20684Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 20567..20684 -
1680789200.5580022-CDS-D-mesarthrocarpus_Contig1065:21231..213381680789200.5580022-CDS-D-mesarthrocarpus_Contig1065:21231..21338Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 21232..21338 -
1680789200.5691488-CDS-D-mesarthrocarpus_Contig1065:21721..218151680789200.5691488-CDS-D-mesarthrocarpus_Contig1065:21721..21815Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 21722..21815 -
1680789200.5832698-CDS-D-mesarthrocarpus_Contig1065:22050..221961680789200.5832698-CDS-D-mesarthrocarpus_Contig1065:22050..22196Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 22051..22196 -
1680789200.6027684-CDS-D-mesarthrocarpus_Contig1065:23220..233131680789200.6027684-CDS-D-mesarthrocarpus_Contig1065:23220..23313Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 23221..23313 -
1680789200.6125994-CDS-D-mesarthrocarpus_Contig1065:24211..242981680789200.6125994-CDS-D-mesarthrocarpus_Contig1065:24211..24298Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1065 24212..24298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1065.4.1

>prot_D-mesarthrocarpus_Contig1065.4.1 ID=prot_D-mesarthrocarpus_Contig1065.4.1|Name=mRNA_D-mesarthrocarpus_Contig1065.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=255bp
MYVFGGYNGTDRLCDFYQHDFATGAWRQLESHGEVPTGRSSLVAQVYGNS
LFVFGGYNGQVVLNDFYEWRFQPLLVPPPTLQEDMRRLVNNRELSDVTFI
VDGFPVYASRVHLALRSEHFRAMLYGGMRESESGQEIEIKDVSHSVFLKL
LEYLYTDQLGEVTADQAVHLLVASEQYLLLRLKSLCEEAIRKSITVENVC
TVFLLAHKHNAEGLKEIALDFILDNMEGVKSTADFLELKQEPDLLMEIIL
RQAS*
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mRNA from alignment at D-mesarthrocarpus_Contig1065:18356..24364-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1065.4.1 ID=mRNA_D-mesarthrocarpus_Contig1065.4.1|Name=mRNA_D-mesarthrocarpus_Contig1065.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6009bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1065:18356..24364- (Discosporangium mesarthrocarpum MT17_79)
CCGGGGCTCACAGGGAAGGTGCCCACGCAGAGGTACTTCCATGCATGCGC
GGTGCATAACGGGAGCATGTACGTCTTTGGAGGCTACAATGGCACAGACC
GGCTCTGCGACTTCTACCAGCACGACTTCGCCACGGGGGCTTGGAGACAG
CTGGTGAGAAGAGGACCGGGGCACGGGGGGGGAAGGAGCTGTGCTCTGCC
GTAGGTTTATCCCGGGCTTTAGGGTTGGGGATTAGGGTTACGGGGTGTGT
GGGACTTGGTTTTTTTAGGGGGGGGGGGGGGTGACCCGACTTCAACGCAG
GGACATGGAGGCAGCCGGTCAGCTAGCCAAGGGCGATGGCGAGAAGGAGA
GAAGGGGAGGAAAGAAGGCGTATCTATCTACTGTGCATTTTGGGGGGGGG
GGTATAGGGTTGGGGTTAGAGTCAGAGTAGGGATAGGGTTACAGGCGTTT
GGGATCTGGGGTTTGGGTTTTAGGATCAGGCACAACTTCACTGTGGGGGT
GTGGAGGCAGCTGGTCAGAGAGCCTAGAGGGCACCAGGAGGAAGAAGGGG
AGAGAAAGAGAAAAAAGTGAGGGGAAAATATGCGGCCTCTACTGTAGGCT
TATTTTCATGTCAGGGTTAGAGTTAGGGTTGTGGGGTTTGGGGTGTTTGA
GTTTTAGGGTTAGCCATGGCTTGACCACGGGCATGCAGAGGCAGCTGGTG
AGCAGGAGGAGCACCTTATTATTAGGGTTGGGGGGTTGGGGTTAGGGTCG
GGGCTAACGATTCGAGAGGGAGGAGGGTATGGCACCAAGCAGGTTAGATA
TAAAGTTATGCTGTGATGTTCCAAATTGTTTAGGGCTAGGGTGTCTGTGC
ACGAGACATGCATAGGGAGGATATTTGGTTCTGGGCGATTGGAAGCAGAA
GCCACCAGTCTCTTGGTGAGATACCCTTCTACACCTTGTGTGACGGCAGG
GTACAGTAGTTGGCGGGTTGTTGGTGGCTCCTCAGTAGAGTTTCCAGCCA
GCTTAACACCCCCACGCTCCCGATAACCCCCCCTGCACTTGTCCGTGGAA
GGAGTCACATGGGGAGGTACCCACAGGAAGGAGCAGCCTGGTGGCCCAGG
TTTACGGAAACTCTCTCTTCGTCTTTGGTGGGTATAATGGCCAGGTAAGG
CTCAGAGTTCGGTGGGGTGAAGGATTAGTTTTTGCACGGTGCTTTATCTG
CCAAGGGTCTGCGGGGTGATGGTTGATCGCTCGTCAGACCAACAGAGGGT
TTGCTTGCCTGTCGATGGCCAGAGATAGTTTATGTTGGGTGGGACGTTCG
AGTCTCCTTTTGATGCCACAGTTTGTGTTTCGCAATCCCTAATATACACC
TTGGTCACCGCTGCCCCTCCGCTTCCAAGCAGTAACCCTTCTGCTCTCCA
GGTTAGTACTGGTGAAAAAAAAAGCACGCTTGAAAGTGGTGGTCGCAGTG
TAATAGTATGGAAGGGAGGGGGGAAGAAATGGTTCAAGGTTAGGGTTAGG
TATGTAGAAACAAAGAAAAACTTCTGAGTAGTATTACTAGAGCTATATGT
TTAGAGCAAAAGCCGAGATCAATCGAAGTCTTAGATGTGGCAGTTAGGCT
GTAGGCCTACCCCAGAAGGGAGGGGGCGGATTTCAAGGTAAAGTCGTGCA
TGGAACCGGGGACACAATATGATATTCGACTTAGGTAGCTGTAATATGAG
GTCAAGAAAACACAAGCACTCTAAATTCAGTGCAGTGAATGAGAGTAAAA
TCGTTAGTGTCTAAATAGAGAAAATTGAGCTGGCAGGCAGTTAGTTACAG
GAAAGTTGCAAGGGGGTCCATAATTGTGGCTGGTAGACTGGGAGGCGTGA
AAGGTGGGTAGAGAGCGGAGTGAGGTGGACAGGATTGAATACAAGGAGAT
AAGTTGGTGCTTGTGTTCAGATAGATTATGGGTCCAGAATCCACAACGAA
GTGCAGCAGTAGCGATAGAGGAGAGAAACATCAATACACGTTCGCAACGG
GCACAATTAGACTGCAGTAGATAGTAGGCCACGCGAAAGTGGGTGGTGCT
GTACACGCTACAGAGCTACGAGTAGACAGAGAGGATGCCCTCTGATCTTG
GGAAACCCTCCATCCCCGCTGCCCCTCTTGTGTGCCTCTCCTGGACGACC
GTTGTACGTGACCCTGAGGTGGTGCTCAACGACTTCTACGAGTGGAGGTT
CCAGCCGTTGCTCGTGCCGCCTCCGACCCTGCAGGAAGACATGCGGCGCC
TGGTAAACAACAGGGAGCTTAGTGACGTCACCTTCATTGTGGACGGCTTC
CCTGTGTACGCCAGGTAAGGAAGGCTTCGAGTTGAAGCCGAGGGAGGTTC
TGTTTCCCGTTTATATCACGGAGCTCCAGACGGTGCATTTCCAAGATGTA
TTGGTCATTCCCATGTTTTGGTGTCCATCACCGCACAGAAAGGGCAATCA
ACGATCAGTGTCCTCTTTTTGACGCACCCTCTCTCATATTCACTTTGTCC
GTTCTGGTCCCCTCGTGCCGCACTGCGCTTCCCCCGACCGACCGAGCAGC
CGAGTGCACTTGGCGCTTCGTTCCGAGCACTTCCGGGCGATGCTGTACGG
GGGGATGAGAGAGAGCGAGAGTGGACAAGAGATCGAGATCAAGGTACTTG
ACGAACGAGTGAAACGACTGAAGAACGATCGACGCATAGCTCTAGAGTAG
GGCTCCTGTAGTCCAAAATGTTTGCTGTATTGTAGAGTTCTAATGGATAA
CAATTTCTTGTTGCTCGGTGGACCTGTCGGCATCTCGAAAGTGACCCTGA
TTAGCGCCGCTAAAGTAATTGGAGTTACGATGTTTGGCTCAGTTATGCTG
CCCGTGGACTCTTCCCAAAGCTGAGCGACTACGAGACCGAAAAGCGACGA
CTCCAGCGGAGGCATGTGCGCAATTATACTTTGTGATTTTTAGTCCGTGC
CGCCTGTTCTCCAACGGATACATTCCTGCCAATGATTACGTCCGTGTCAT
CGCTTTCGTTCGTGCTATCCCTTCAGGACGTGTCCCATTCAGTTTTCCTG
AAGCTGCTGGAGTACCTATACACAGACCAGCTGGGGGAGGTGACAGCAGA
TCAGGCCGTGCACTTGCTGGTGGCGTCGGAACAGTGAGTATCGTGAAACG
CATTAACCCTAACCCTGACCCTTACCTACCCTACGCTTGTGTTTTGATTT
GAACACCTTCTCTGTGCGACAAGACCGGGGGGGGGGGGGTTCAACCGTGG
GTCGGAAAGTGTTAGGAAGAGGCGAGTAGATTTTTTTTGGTGACAGAGCA
AAGATCTTCCGGTGTTCCGAGTACTCCGAAGGATATGTCACTTTTTTTGT
TGGGATTCTGCACACACAGGTGGGAAACGAGTCATGATTGAGGGCTATCA
GTAGTCCCAAAGGTTAGTTGTAGTCGTACGGGCAAATGTCCCAGAACCAG
TCAGAGTAACTCAATCTCTTCGCCCTTGAAACTCGATCGCGCGATCTGAC
TGCTACACACTAGGTTGCACTTGGGCAAGAAGTAGGTGGTACATGATCCT
CACAGACGTGAGTCGCAGAACAAGATGAACCTGACCAAGAACCTGCCGCT
CGATATATTGTGCGATCTAACTGCCCCACACTTGCGTTGCATTACGTGTT
GCATATCTTGAACATCTGCACTGCGAACAGGTATCTCTTGCTGCGGCTCA
AGTCCCTTTGCGAAGAAGCCATCAGAAAAAGTATCACAGTCGAGAATGTG
TGCACTGTTTTCCTCCTGGCCCACAAGCACAACGCGGAGGGACTCAAGGT
CAGATCGGAACGACTCACCGCGATGAACATGCCCAAGGCGTACTCGGCCA
TTAAATCGACCTTATGCGCCACGAGCCTGGCATTTATCCTTGATACTCCG
TGAACAAGTCGTCGAGTTATCACGAAGTCACAACATGAAGTCCAGAGCAA
AGGCGATAGAGCTGAGCTTTCTCGCCCACGGATTCTTCTTACATGAGTTG
TTGATCCATGTTACAGTCACAGGCTTTCCGTTGCGGGGAGCAGCCGACAT
CTTGCGCACAGATTGTCTCGATCAGTCTTCGGGCTTGTATTAGTTCGCTT
AATAGATTCGGCAAATTGTAAGAACGTACCCTGTTCCCCGATGTGGGCGT
TAAGTTGCGCACCATAACTGTTCTACAGCCTGCACTAGACTAGTGTACCC
CACACGGGCATGAGCGTGACATGCGCCTATGTGGACCCCAACTGCCTGTA
TTCGTACGAAATCAAATTGTCATCCGAAAAGGGACTTTTGTTGCATAGCT
GCTTCAATGCGTGTACTTGCTTTCATGATGGTATTATGTTTCCAGCCCAT
GATCAACCTTCCCACCATGTCCTGTACTCCTCTCCAAATCACCCTTCTGG
ACAGGAAATCGCTTTAGATTTCATCCTGGACAACATGGAGGGCGTGAAGA
GCACCGCTGATTTCTTGGAACTGAAGCAGGAGCCCGACCTTTTGATGGAG
ATCATCCTCAGACAGGCCTCCTGACCTCCTTCATGGAGCTACATGATAGG
ATTCCGCATTTGGCACTTTAATATGCTATTGTTCTCCAGTACCCTCCGCT
CTGTATTACACATCACTCCCCGCGGACCAACCCCCTCACGCCCAACACGA
GGCGTGCAACCAAAATAGAGGAAAACTTGTGAATGAGGGAAAAGGGAAGA
GGAGAATACGGGAGGATCTTTAGCGTCACAACGTGGGTGTTGCTTGGTGT
GACTCGTCGCGCAGCAAGGATCGATGATGGTATTTCTCCCGACCTTACTT
AGTTGTTACACACACATCCTGAGCCTACAGGACTTGTAGCACCATGCAAT
AGCCCCCAGCTCGTCCACCCACTCGGTGAACCTGCAGAAGTTTTCTGCTG
CGTATGAAGAAACAGTCAGTGCGCTCTTGAGGTAGTACTGAAGATGGTTG
GGGACAACGCTGATATCTTGCAGTGTGCAACCGATTACGTAGTTTTCGGA
GGAATGTATGGAGCTTTGGGTGACGTTTGCTGTTGTCCCGGGGTGTTTTC
CTGCATATCGTTTATTGATAAAGTGGTGGACCTAGCACCGTAAGGGATGT
GGGCCGAAGCACGTTCTGTGTGTTAAAAGGTCTATATCTAGTGCTGTGAA
GACACCGCACTGCGGTATAACGTGGACAGATGGCTGATAGGGCTTCATCA
GTGAGCAGCCCTCATTTGACATGACGTATGTAGTAATTGGAAAGAGCCCT
ATGCTCACGTACCACGCAAGTCGAAGTGGTAATTAATTCCTTTTGGCAAC
GCGAAAGTCTAGTTTTGCTTCAGGGTCGCGATTATTTTTTGTTTTATCCG
AGTACGTTGTTATTACTGTCCTGTAAGTGTATGTATGTGTGTTGCGTACT
TGTCCTCATCCCCTCGGAGCTGTTATCGGCTCGGGTGGTGGTGCACATGT
GTTTTGTCCGAGGTTACTAAGTAACTCCAAATGTAAGAGGTCCTGTATGA
ACCGTCCACTGTGGAAAGAGAGGTCTTAAATTGAAAGTCTTGCAGGGACA
CGGCTGCCACAAGTGTCACCCTGCATTCATGCATGTGGGTGAGTGCCAGC
TTGGCATGGTGCAGGGGGGTGTATTGAGGAAGGACAAAATAGAACATTGC
ACAGGTAGTCCCTGTTACAATAGGAAGTTTATCCCTCCTAAAGAAATAAT
AACCCATCCTGTAGAAGAGCCTTCGAAACAAAACTTCCAATATTTGCCGT
TGATGTTCTGAAACCTTTCACTGTACTTTTTCGCTAATGTGGTCCGCGCA
GTGAGTTAATCGAGACAGATTACGTATCCCTACTGCAGTACAACAAATTT
GGCGTCTTAGCATAATAGAGCTCTTATACTCCAGGAATATGGAATACAGT
AACTCAGAAAGCTTTCAGTAACTCGTTTTTGACCTTGTCCAGTCTTGCTT
GTCTCATGGTTCTCTCTCTACCACGTTGCCTCTCCATATACGCCCTCACT
CGATCCGCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1065:18356..24364-

>mRNA_D-mesarthrocarpus_Contig1065.4.1 ID=mRNA_D-mesarthrocarpus_Contig1065.4.1|Name=mRNA_D-mesarthrocarpus_Contig1065.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=765bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1065:18356..24364- (Discosporangium mesarthrocarpum MT17_79)
ATGTACGTCTTTGGAGGCTACAATGGCACAGACCGGCTCTGCGACTTCTA
CCAGCACGACTTCGCCACGGGGGCTTGGAGACAGCTGGAGTCACATGGGG
AGGTACCCACAGGAAGGAGCAGCCTGGTGGCCCAGGTTTACGGAAACTCT
CTCTTCGTCTTTGGTGGGTATAATGGCCAGGTGGTGCTCAACGACTTCTA
CGAGTGGAGGTTCCAGCCGTTGCTCGTGCCGCCTCCGACCCTGCAGGAAG
ACATGCGGCGCCTGGTAAACAACAGGGAGCTTAGTGACGTCACCTTCATT
GTGGACGGCTTCCCTGTGTACGCCAGCCGAGTGCACTTGGCGCTTCGTTC
CGAGCACTTCCGGGCGATGCTGTACGGGGGGATGAGAGAGAGCGAGAGTG
GACAAGAGATCGAGATCAAGGACGTGTCCCATTCAGTTTTCCTGAAGCTG
CTGGAGTACCTATACACAGACCAGCTGGGGGAGGTGACAGCAGATCAGGC
CGTGCACTTGCTGGTGGCGTCGGAACAGTATCTCTTGCTGCGGCTCAAGT
CCCTTTGCGAAGAAGCCATCAGAAAAAGTATCACAGTCGAGAATGTGTGC
ACTGTTTTCCTCCTGGCCCACAAGCACAACGCGGAGGGACTCAAGGAAAT
CGCTTTAGATTTCATCCTGGACAACATGGAGGGCGTGAAGAGCACCGCTG
ATTTCTTGGAACTGAAGCAGGAGCCCGACCTTTTGATGGAGATCATCCTC
AGACAGGCCTCCTGA
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