mRNA_D-mesarthrocarpus_Contig10648.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10648.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10648.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: D7FPK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK9_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 5.750e-51
Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPD--------GSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +VVVM+FC+GFKVT++K+L AV++DR A+MR+VTESF YQIHIDGLFNGDPHPGNIL+Q   +          GS  A PVLLDWGLAKTLP+ +R+AFSRF+YA  E DF SML +F+E+G+KLNRFDPAE
Sbjct:  289 KVVVMTFCEGFKVTDSKALAAVDIDREAVMRSVTESFAYQIHIDGLFNGDPHPGNILLQPAASSSKSGGKRGRGSRAAVPVLLDWGLAKTLPDHLRIAFSRFIYAGCEHDFVSMLIAFEEIGIKLNRFDPAE 420          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.100e-50
Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 1
Query:    4 VVVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQ---TFTNPDG-----SMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            VVVM+FC+GFKVT+ K+L AV++DR A+MR+VTESF YQIHIDGLFNGDPHPGNIL+Q   T +  DG     S  A PVLLDWGLAKTLP+ +R+AFSRF+YA  E DF SML +F+E+G+KLNRFDPAE
Sbjct:  730 VVVMTFCEGFKVTDPKALAAVDIDREAVMRSVTESFAYQIHIDGLFNGDPHPGNILLQPAATSSRSDGKRDHGSRAAVPVLLDWGLAKTLPDHLRIAFSRFIYAGCEHDFVSMLIAFEEIGIKLNRFDPAE 860          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A835ZC02_9STRA (Beta-lactamase/transpeptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC02_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.900e-46
Identity = 79/122 (64.75%), Postives = 95/122 (77.87%), Query Frame = 1
Query:    7 VVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +VM FC GFKVT+  +++   LDR AIM AV  SF YQ+HI G FNGDPHPGNILI+TFT+  G   ARPVLLDWGLAK LPE +R+AFS+FVYAA+E D  +ML+S D+MG+ LNRFDP E
Sbjct:  246 LVMRFCPGFKVTDTTAMERASLDRLAIMEAVCRSFAYQVHILGRFNGDPHPGNILIETFTDEAGCPSARPVLLDWGLAKQLPEHLRLAFSKFVYAASEMDVVNMLESLDDMGMVLNRFDPME 367          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S2V6Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z4_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.710e-44
Identity = 76/126 (60.32%), Postives = 102/126 (80.95%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAVE-LDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSM-GARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            QV+VM+FC+G+KVT+   LD ++  +R  +M+A+ E+F YQI++DGLFNGDPHPGNIL+Q+     G + G +PVLLDWGLAKTLP+ +R+AF+RF+YAA E DF  ML SF++MG+KLNRFDPAE
Sbjct:   78 QVLVMTFCEGWKVTDKGMLDKLDGEEREKLMKAICEAFAYQIYMDGLFNGDPHPGNILVQSEEGGGGWVTGTKPVLLDWGLAKTLPDHLRLAFARFIYAAQEMDFIQMLISFEDMGIKLNRFDPAE 203          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S3XWD7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWD7_HETAK)

HSP 1 Score: 156 bits (394), Expect = 1.320e-41
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAV-ELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGA--RPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +VVVMSFC G+KVTE + LD +   +R  +M+ + E+F YQ+H+DGLFNGDPHPGNIL+Q      G   A  RPVLLDWGLAK   EQ R+AF++FVYA  E DF SML +F+EMGVKLNRFDPAE
Sbjct:  270 KVVVMSFCAGWKVTERERLDRLPHRERERLMKKICEAFAYQMHVDGLFNGDPHPGNILVQAREVDGGRALADPRPVLLDWGLAKAFGEQKRLAFAKFVYATAELDFVSMLAAFEEMGVKLNRFDPAE 396          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S3XWC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWC8_HETAK)

HSP 1 Score: 156 bits (394), Expect = 1.440e-41
Identity = 78/127 (61.42%), Postives = 95/127 (74.80%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAV-ELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGA--RPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +VVVMSFC G+KVTE + LD +   +R  +M+ + E+F YQ+H+DGLFNGDPHPGNIL+Q      G   A  RPVLLDWGLAK   EQ R+AF++FVYA  E DF SML +F+EMGVKLNRFDPAE
Sbjct:  270 KVVVMSFCAGWKVTERERLDRLPHRERERLMKKICEAFAYQMHVDGLFNGDPHPGNILVQAREVDGGRALADPRPVLLDWGLAKAFGEQKRLAFAKFVYATAELDFVSMLAAFEEMGVKLNRFDPAE 396          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S4CTW3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CTW3_9EUGL)

HSP 1 Score: 134 bits (337), Expect = 7.390e-34
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDP 366
            +V VM FC+G K+T+ K L  +  ++ A+MR V ESF YQ+HIDGLFN DPHPGNIL+Q  +       A PVLLDWGLAK + +  R+AF++ V+ A+++DF  ML +F  MG+KLNR DP
Sbjct:  426 RVCVMEFCEGMKLTDPKVLAKIP-NKEALMRVVCESFAYQMHIDGLFNADPHPGNILVQINSKDGAPPVATPVLLDWGLAKIMDDDKRLAFAQLVWTAHDKDFIGMLDAFVNMGLKLNREDP 546          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: F2TZZ3_SALR5 (Serine/threonine protein kinase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZZ3_SALR5)

HSP 1 Score: 133 bits (335), Expect = 1.450e-33
Identity = 62/124 (50.00%), Postives = 90/124 (72.58%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +V+VM +C+GFKVT+   LDA ++DR ++MR + +++ +Q+++DG FN DPHPGNIL+Q     DG   A PVLLD+G+ + LPE+ + AF+  +YAA   DF ++L SFDEMG+KL R DP E
Sbjct:  800 RVIVMEYCEGFKVTDTDLLDAHDIDRESLMRRICQAYAHQVYVDGFFNCDPHPGNILVQV---RDGK--AYPVLLDYGMCRQLPEEKKRAFAAMIYAATTMDFGTLLWSFDEMGLKLKRDDPFE 918          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S1B696_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B696_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.950e-31
Identity = 58/124 (46.77%), Postives = 87/124 (70.16%), Query Frame = 1
Query:    1 QVVVMSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDPAE 372
            +V+ M +C GF V +  +++    DR  ++R + E++  Q+H+ GLFN DPH GNIL+ T  + D S+   PVLLD+GL K L ++MRVAF+R V+AA+E D  ++L+SF+EMG+ LNR+DP E
Sbjct:  321 RVLTMEYCAGFSVRDVAAMEKAGTDRGLLLRRICEAWAAQMHVGGLFNADPHAGNILVSTAVDGDASV---PVLLDFGLTKRLDDRMRVAFARLVHAADESDVDALLRSFEEMGLVLNRYDPLE 441          
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Match: A0A7S1N328_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N328_9EUGL)

HSP 1 Score: 116 bits (290), Expect = 7.780e-31
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 1
Query:   85 IMRAVTESFGYQIHIDGLFNGDPHPGNILIQTFTNPDGSMGA-RPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFTSMLQSFDEMGVKLNRFDP-AEVRG 381
            ++R V E+F YQ+H+DGLFN DPHPGNIL+Q     DG+    RPVLLDWGLAK L ++ R+ F++ V++A +RDF  ML +FD MG++LNR DP  +++G
Sbjct:    2 LLRLVCEAFAYQMHVDGLFNADPHPGNILLQFEPPRDGAAAVPRPVLLDWGLAKVLDDERRLIFAQLVHSAADRDFVGMLAAFDGMGLRLNREDPMTDMKG 102          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10648.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPK9_ECTSI5.750e-5165.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBB7_9PHAE1.100e-5067.94FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZC02_9STRA3.900e-4664.75Beta-lactamase/transpeptidase-like protein n=1 Tax... [more]
A0A7S2V6Z4_9STRA1.710e-4460.32Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3XWD7_HETAK1.320e-4161.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XWC8_HETAK1.440e-4161.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4CTW3_9EUGL7.390e-3452.46Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
F2TZZ3_SALR51.450e-3350.00Serine/threonine protein kinase n=1 Tax=Salpingoec... [more]
A0A7S1B696_9STRA4.950e-3146.77Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1N328_9EUGL7.780e-3153.47Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10648contigD-mesarthrocarpus_Contig10648:1215..2974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPK9
PFAMsABC1,Beta-lactamase,WaaY
Model size402
Max annot lvl2759|Eukaryota
KEGG koko:K08869,ko:K10779
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.34e-50
EggNOG OGsCOG0661@1|root,KOG1235@2759|Eukaryota
EC3.6.4.12
Descriptionregulation of tocopherol cyclase activity
Cds size390
COG categoryE
BRITEko00000,ko01000,ko01001,ko03000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789200.3219936-UTR-D-mesarthrocarpus_Contig10648:1214..12261680789200.3219936-UTR-D-mesarthrocarpus_Contig10648:1214..1226Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10648 1215..1226 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789200.3373961-CDS-D-mesarthrocarpus_Contig10648:1226..13341680789200.3373961-CDS-D-mesarthrocarpus_Contig10648:1226..1334Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10648 1227..1334 +
1680789200.3499973-CDS-D-mesarthrocarpus_Contig10648:1860..20181680789200.3499973-CDS-D-mesarthrocarpus_Contig10648:1860..2018Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10648 1861..2018 +
1680789200.3621902-CDS-D-mesarthrocarpus_Contig10648:2850..29741680789200.3621902-CDS-D-mesarthrocarpus_Contig10648:2850..2974Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10648 2851..2974 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10648.1.1prot_D-mesarthrocarpus_Contig10648.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10648 1227..2974 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10648.1.1

>prot_D-mesarthrocarpus_Contig10648.1.1 ID=prot_D-mesarthrocarpus_Contig10648.1.1|Name=mRNA_D-mesarthrocarpus_Contig10648.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=130bp
MSFCKGFKVTEAKSLDAVELDRPAIMRAVTESFGYQIHIDGLFNGDPHPG
NILIQTFTNPDGSMGARPVLLDWGLAKTLPEQMRVAFSRFVYAANERDFT
SMLQSFDEMGVKLNRFDPAEVRGHRQWPR*
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mRNA from alignment at D-mesarthrocarpus_Contig10648:1215..2974+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10648.1.1 ID=mRNA_D-mesarthrocarpus_Contig10648.1.1|Name=mRNA_D-mesarthrocarpus_Contig10648.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1760bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10648:1215..2974+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGGTGGTGATGTCCTTCTGCAAGGGATTCAAGGTCACAGAGGCTAA GTCCCTGGACGCAGTGGAGCTTGATCGGCCAGCCATCATGAGAGCCGTCA CGGAATCCTTTGGGTACCAGGTGGGCATAAGGAGGCATTTTTACGGCATC AATCACCCCCGTGCTGGGAAGAATGACAGTTAAACACTCGGATCCAATGT GTCCAAAAAATACCATTGCAGGCTCTCATGTTTCATGAGAACCTTACCTC CCTACATGCGACGCTTGACATCAGCCTCTGTTTTTTTTCGATTTTGATTT GCCTTTTGCTGTCGTTTGGAGGGCCTTACCCTATACATAACCAAAATGAA ACAAGGTATCACAGTGAACCACATGCTCAAGGGTCACCCCACCCCTTTCA TCCTGTCAGGGTGAGGGCTAGAGATAGCTTGAGAAGTACCCTGTTGCCAC CCCACCTTTCTCGTCCCTTCAGTGTTAGTGTTGGGGTGAGCTCAAGAAGC ACCCCGTCAACACCCCGCCTGTTTCACCCCTCCCCACCCCACCAATTCTT CACCCTTCTTCACCCCTTTGTCGGTCTGACAAAAACACAAAGCAGACTTG AAAAAACTCGAAAAAACCTCCTCTTTCCTCTCCCTGGTGGGTCCAGATCC ACATCGACGGACTGTTCAATGGCGACCCACACCCAGGGAACATCCTGATC CAGACCTTCACCAACCCAGACGGCAGCATGGGCGCCCGCCCGGTCCTCCT GGACTGGGGCCTGGCCAAGACGCTGCCGGAGCAGATGCGTGTGGCCTTCT CCAGGTGCTACCCGTCTGCGCTGTACAGTGCTGACTAGCTACCTAGCATA CACTGAGTTGGCAGAGAGGCTTGTTTTTGTAGCTGAAGGGGAGGCATGCC TGGTGGATGGGATCATGGTGATCGTGGGGGAGGGGGAGAGGAGATGGACG GTTTTAGTGACAGAGTGGCAGCAACGGCCACGGTCTGTGCCCCCTCACCT CCGCAGGGTCAAAGCGATTTATTTTAGCTTGACACCCATCTCGTCAAAAG ACCGGAGCATGGAGGTAAGGTTTCTCTCATTGGCTGTGCACACGAGTCTT TTTTCTGTCCAGTGAGGGTGGTTAAGTTAATTAGGAGCTGGGGTTGTATA TGTGCACAGTGGCGTCTTCCACTTGCAGTGATGCATATTAACATACGCTT ACCTCGCCCTCTAACCCCATCGATGCTCACCCGAGTGATTGAACGAGCGT AGGCCCATGCATGCAGATGACCAGGCCAGTGCCTGTGAAAAAAGAACAAG GAAAGCGATGTTGTCCGTAAACACTGACCCAGTTTTTCTCTCTGAGCTGC TGCTCCTGCTGGTTAGACTTCAGCTGAGCTTTACTGTGCTGTACTGTACT GTACTGTACTGTACTGTACTGTACTGAGCTCTGCTGTCTCTGGATTGGGC TCCCTCCCTTTTGTAATCCTCTCCCTGCAATGTTTCGGGGGATATTGTCC CATCACATTTTTTTCTCTCTTTTTCCCTCTCCTGATCCGCCCCCACTCAT GCCATGTGTATGTGAGTAACCCCAACCCTGTAGCCCCAGCTCTTGATTAA CTAGCCAACCCTCACACCCCCACCTGGCAAAAAAAGGTTTGTGTACGCAG CCAATGAGAGAGACTTCACCTCCATGCTTCAGTCTTTCGACGAAATGGGT GTGAAACTCAATCGCTTTGACCCGGCGGAGGTGAGGGGACACAGACAGTG GCCGCGCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10648:1215..2974+

>mRNA_D-mesarthrocarpus_Contig10648.1.1 ID=mRNA_D-mesarthrocarpus_Contig10648.1.1|Name=mRNA_D-mesarthrocarpus_Contig10648.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=390bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10648:1215..2974+ (Discosporangium mesarthrocarpum MT17_79)
ATGTCCTTCTGCAAGGGATTCAAGGTCACAGAGGCTAAGTCCCTGGACGC
AGTGGAGCTTGATCGGCCAGCCATCATGAGAGCCGTCACGGAATCCTTTG
GGTACCAGATCCACATCGACGGACTGTTCAATGGCGACCCACACCCAGGG
AACATCCTGATCCAGACCTTCACCAACCCAGACGGCAGCATGGGCGCCCG
CCCGGTCCTCCTGGACTGGGGCCTGGCCAAGACGCTGCCGGAGCAGATGC
GTGTGGCCTTCTCCAGGTTTGTGTACGCAGCCAATGAGAGAGACTTCACC
TCCATGCTTCAGTCTTTCGACGAAATGGGTGTGAAACTCAATCGCTTTGA
CCCGGCGGAGGTGAGGGGACACAGACAGTGGCCGCGCTGA
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