mRNA_D-mesarthrocarpus_Contig10647.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10647.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10647.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A835ZHV8_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.100e-38
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FEL EYERKT L  +  SL  DYS+VQPGD +VAFSK DIF+I+ +IE+ T+ +CCVV+G LP ETRS QA+LFN + TGYDVLVASDAIGMGLNLNIRR
Sbjct:  356 GDHFELHEYERKTPLAVAPRSLDGDYSRVQPGDCVVAFSKDDIFAIRRRIEETTSLRCCVVFGALPSETRSQQARLFNDDDTGYDVLVASDAIGMGLNLNIRR 458          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: K8Z929_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z929_NANGC)

HSP 1 Score: 140 bits (354), Expect = 1.150e-36
Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD  E+++YER TEL  + E L  DYSKV  GD IVAFSK+DI SIK++IE  T+HKCC+VYG LP ETRS QA +FN EGTG+DVLVA+DAIGMGLNLNIRR
Sbjct:  479 GDDLEIRKYERMTELTIASEPLL-DYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQAGIFNEEGTGFDVLVATDAIGMGLNLNIRR 580          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A1E7FUI6_9STRA (RNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUI6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.920e-35
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLAND------YSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FEL  YER T+L  S++SLA +      Y  VQPGD IVAFS+ DIF+IK +IE  TNHKCCV+YG+LP +TR++QA+ FN   +GYD+LVASDAIGMGLNLNI+R
Sbjct: 1110 GDDFELHHYERFTDLQVSRKSLARNGKEKGAYRNVQPGDCIVAFSRNDIFAIKREIESMTNHKCCVIYGKLPPQTRADQARRFNDPDSGYDILVASDAIGMGLNLNIKR 1218          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A3M6VRU9_9STRA (RNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.860e-34
Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FEL+ YER++ L+ S   L N+Y++++PGD +VAFS+ DIF IK  IE  T  KCC++YGQLP ETRS QA+LFN  G  Y+++VASDAIGMGLNLNI+R
Sbjct:  331 GDDFELRSYERRSPLVISSTHL-NNYNQIRPGDCVVAFSRRDIFQIKRDIEIKTGEKCCIIYGQLPPETRSQQARLFNERGNSYNIMVASDAIGMGLNLNIKR 432          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A7S2R202_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R202_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.390e-34
Identity = 64/109 (58.72%), Postives = 80/109 (73.39%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESL--AND----YSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FE++ YER T L  ++ES   A+D    YSKVQ GD ++AF++ DIF+IK +IE  T HKCCV+YG LP + R+ QA+ FN   + YDVLVASDAIGMGLNLNIRR
Sbjct:    5 GDDFEIRHYERFTPLYVAEESFGAASDTLGSYSKVQSGDCVIAFARNDIFAIKREIENTTPHKCCVIYGSLPPQIRAEQARRFNDPDSDYDVLVASDAIGMGLNLNIRR 113          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A176W0Q0_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0Q0_MARPO)

HSP 1 Score: 132 bits (333), Expect = 7.810e-34
Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD     EYER   L  S+ESL  D+  +Q GD IVAFS+ DIF IK ++E  T H+CCVVYG LP ETR+ QAKLFN +  GYDVLVASDAIGMGLNLNIRR
Sbjct:  576 GDELVENEYERFKPLKVSEESLRGDFRNIQAGDCIVAFSRRDIFDIKREVELATKHRCCVVYGALPPETRTQQAKLFNEQDNGYDVLVASDAIGMGLNLNIRR 678          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A2P6TQ59_CHLSO (RNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ59_CHLSO)

HSP 1 Score: 131 bits (329), Expect = 2.710e-33
Identity = 65/104 (62.50%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 MGDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            MG+SF L EY+R T+L   +  L   Y  VQPGD IVAFS+ DI+SIK+ IE+ T H+ CVVYG LP ETR  QAKLFN E   Y V+VASDA+GMGLNLNIRR
Sbjct:  357 MGESFTLNEYDRFTKLTVEEGGLEGGYGAVQPGDCIVAFSRKDIYSIKQYIEQETKHRACVVYGALPPETRRQQAKLFNEEDNAYRVMVASDAVGMGLNLNIRR 460          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: B5Y521_PHATC (RNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y521_PHATC)

HSP 1 Score: 125 bits (315), Expect = 3.540e-33
Identity = 65/109 (59.63%), Postives = 78/109 (71.56%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLA------NDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FEL+ Y+R  EL  S + LA      N Y  VQ GD IVAFS+ DIF+IK +IE  T++KCCV+YG LP ETRS QA+ FN   +GYD+LVASDAI MGLNL+IRR
Sbjct:  156 GDDFELRTYKRFAELKVSVQCLAKSLKDVNSYKNVQAGDCIVAFSRNDIFAIKREIETATSYKCCVIYGSLPPETRSEQARRFNNPNSGYDILVASDAIAMGLNLSIRR 264          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: M4BBS7_HYAAE (RNA helicase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBS7_HYAAE)

HSP 1 Score: 130 bits (326), Expect = 6.350e-33
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD FEL+ YER++ L  S   L N+YS+++PGD +VAFS+ DIF IK  IE  T  KCC++YGQLP ETRS QA+LFN     Y++LVASDAIGMGLNLNI+R
Sbjct:  319 GDEFELRSYERRSPLEISSTHL-NNYSEIRPGDCVVAFSRRDIFQIKRDIEIKTGEKCCIIYGQLPPETRSQQARLFNERDNDYNILVASDAIGMGLNLNIKR 420          
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A8J5SWL2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SWL2_ZIZPA)

HSP 1 Score: 129 bits (324), Expect = 7.410e-33
Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 1
Query:    4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
            GD+ E+++YER   L+   ++L  D   V+ GD IVAFS+ +IF +K  IEK+T HKCCV+YG LP ETR  QAKLFN +   YDVLVASDA+GMGLNLNIRR
Sbjct:  335 GDNLEVRQYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNKYDVLVASDAVGMGLNLNIRR 437          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHV8_9STRA1.100e-3869.90RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
K8Z929_NANGC1.150e-3668.93RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A1E7FUI6_9STRA1.920e-3562.39RNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A3M6VRU9_9STRA3.860e-3460.19RNA helicase n=1 Tax=Peronospora effusa TaxID=5428... [more]
A0A7S2R202_9STRA6.390e-3458.72Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A176W0Q0_MARPO7.810e-3464.08RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3... [more]
A0A2P6TQ59_CHLSO2.710e-3362.50RNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3... [more]
B5Y521_PHATC3.540e-3359.63RNA helicase (Fragment) n=1 Tax=Phaeodactylum tric... [more]
M4BBS7_HYAAE6.350e-3361.17RNA helicase n=1 Tax=Hyaloperonospora arabidopsidi... [more]
A0A8J5SWL2_ZIZPA7.410e-3359.22Uncharacterized protein n=1 Tax=Zizania palustris ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10647contigD-mesarthrocarpus_Contig10647:1252..2454 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008615992.1
Preferred nameSUPV3L1
PFAMsHelicase_C,SUV3_C
Model size312
Max annot lvl2759|Eukaryota
KEGG rclassRC00061
KEGG koko:K03942,ko:K17675
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000003,GO:0000166,GO:0000177,GO:0000178,GO:0000372,GO:0000375,GO:0000376,GO:0000957,GO:0000958,GO:0000959,GO:0000960,GO:0000962,GO:0000963,GO:0000965,GO:0001410,GO:0001558,GO:0001889,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003723,GO:0003724,GO:0003725,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006310,GO:0006325,GO:0006378,GO:0006396,GO:0006397,GO:0006399,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007005,GO:0007275,GO:0008026,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009268,GO:0009295,GO:0009607,GO:0009628,GO:0009651,GO:0009653,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010570,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010928,GO:0010929,GO:0010941,GO:0015980,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0019954,GO:0022900,GO:0022904,GO:0023051,GO:0023056,GO:0030154,GO:0030307,GO:0030435,GO:0030436,GO:0030447,GO:0030554,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031974,GO:0032042,GO:0032268,GO:0032270,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032989,GO:0032990,GO:0032991,GO:0034248,GO:0034250,GO:0034458,GO:0034470,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035639,GO:0035690,GO:0035945,GO:0035946,GO:0036094,GO:0036177,GO:0036180,GO:0036187,GO:0040007,GO:0040008,GO:0042221,GO:0042493,GO:0042623,GO:0042645,GO:0042710,GO:0042802,GO:0042803,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043631,GO:0043934,GO:0043936,GO:0043954,GO:0044010,GO:0044011,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044528,GO:0044764,GO:0045025,GO:0045333,GO:0045727,GO:0045927,GO:0045935,GO:0046034,GO:0046483,GO:0046700,GO:0046983,GO:0047484,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051703,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0061013,GO:0065007,GO:0065008,GO:0070013,GO:0070035,GO:0070129,GO:0070131,GO:0070584,GO:0070784,GO:0070827,GO:0070887,GO:0071025,GO:0071026,GO:0071103,GO:0071214,GO:0071467,GO:0071704,GO:0071840,GO:0072521,GO:0080036,GO:0080038,GO:0080090,GO:0080134,GO:0090304,GO:0090605,GO:0090609,GO:0090615,GO:0090616,GO:0090646,GO:0097159,GO:0097222,GO:0097367,GO:0098798,GO:0104004,GO:0140053,GO:0140097,GO:0140098,GO:1900428,GO:1901000,GO:1901002,GO:1901135,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1902494,GO:1902584,GO:1903311,GO:1905354,GO:2000070,GO:2000112,GO:2000827
Exons3
Evalue9.13e-34
EggNOG OGsKOG0953@1|root,KOG0953@2759|Eukaryota
EC1.6.5.3,1.6.99.3,3.6.4.13
Descriptionmitochondrial RNA 3'-end processing
Cds size312
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789200.2385032-CDS-D-mesarthrocarpus_Contig10647:1251..13411680789200.2385032-CDS-D-mesarthrocarpus_Contig10647:1251..1341Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10647 1252..1341 -
1680789200.25919-CDS-D-mesarthrocarpus_Contig10647:1637..17621680789200.25919-CDS-D-mesarthrocarpus_Contig10647:1637..1762Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10647 1638..1762 -
1680789200.272778-CDS-D-mesarthrocarpus_Contig10647:2357..24541680789200.272778-CDS-D-mesarthrocarpus_Contig10647:2357..2454Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10647 2358..2454 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10647.1.1prot_D-mesarthrocarpus_Contig10647.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10647 1252..2454 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10647.1.1

>prot_D-mesarthrocarpus_Contig10647.1.1 ID=prot_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=104bp
MGDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQ
IEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNL
NIRR
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10647:1252..2454-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10647.1.1 ID=mRNA_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1203bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10647:1252..2454- (Discosporangium mesarthrocarpum MT17_79)
ATGGGCGATTCCTTTGAGCTGAAGGAGTATGAGCGCAAGACCGAGCTGAT TGCGTCTAAGGAGAGCCTTGCAAATGACTACTCTAAGGTACAGCCAGGTA ACACTAACGACCATTGCGCCTTGTCACAACAAACAATAAGCGGCGGACAC TTTTTAAAAAATACTTCCTAACCGATTTATAATGCCGCGAGGCCGAAGTA CTTCGCAGTGTTGGAGGCAGTTACAGACAGTTACAGACAGTTACAAACAG TTACAGGCAGTTACAGACAGTTTTTGGGATACAATACATATATATATATG TATATATGTATCCACCTCTTACAGAAAACCATTGAGATTTGGCCAAGAGG CTCTCCCCCCCCCCTGTACTGTACTTGTATTTTTTGTAAGAGTGAAAGTG TGCCACGTCGAAAGTACTCAAAGTAGTACAGATGGTATAGGTAGCATGAT GAGTAAGCAATAACCCTTAACGGAAGTGAAATTTCTCCAGTGTGTTCAAT TTAGAAGTCTTAGAGGCTAAGCTTTCACCTGTCCGCTGGTGGTGGATTAT GATAACCTATGGTTGACGGAAGGATCATTGCTTACACCTACTAGCAAATG GTAGCGGTTGACGCCAAAGTGTGCTCACTATGTGAACCCCCATCCTTTCC AGCAATCAACTCCTTGTGCTTTCGTTCTCTCACCCTGCTAAGGTGACGCT ATTGTAGCTTTCAGCAAGGCGGATATCTTCTCCATCAAGGAACAAATAGA GAAATACACCAATCACAAGTGCTGCGTGGTGTACGGTCAGCTTCCTCAAG AGACGCGGTCCAACCAGGTGTGTTGTGCTCAGTTGGACTTCGAAGTAAAG CACCTCATGGTGTTTTTCCTTGGATCTCCAGGGCCTCTGCTGAATGCTCC AGAGCCTCCGCTGTTGCTCCGGAGCTCCTGCGGTGTCTTGAAGAAGAAAT GTTGACCTCTTGGAGCTCTCTTGTTACCTGTGGCCTTATTTTGATCCTGT GGCATTCGCTAGGCCCTTCCCATCCCGACTGTCTCCGTGCTCTTTCCGTT CTCTCCCATCCGTTTTTTTACTTCCCCCCCCCCCCCTGTTGCCGGTGTGG CTGGTTGCTCAAGGCAAAGCTGTTCAATGCAGAAGGCACGGGGTATGACG TGCTGGTCGCCAGCGATGCCATTGGGATGGGCCTTAACCTTAACATTCGT AGG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10647:1252..2454-

>mRNA_D-mesarthrocarpus_Contig10647.1.1 ID=mRNA_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10647:1252..2454- (Discosporangium mesarthrocarpum MT17_79)
ATGGGCGATTCCTTTGAGCTGAAGGAGTATGAGCGCAAGACCGAGCTGAT
TGCGTCTAAGGAGAGCCTTGCAAATGACTACTCTAAGGTACAGCCAGGTG
ACGCTATTGTAGCTTTCAGCAAGGCGGATATCTTCTCCATCAAGGAACAA
ATAGAGAAATACACCAATCACAAGTGCTGCGTGGTGTACGGTCAGCTTCC
TCAAGAGACGCGGTCCAACCAGGCAAAGCTGTTCAATGCAGAAGGCACGG
GGTATGACGTGCTGGTCGCCAGCGATGCCATTGGGATGGGCCTTAACCTT
AACATTCGTAGG
back to top