mRNA_D-mesarthrocarpus_Contig10647.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A835ZHV8_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV8_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.100e-38 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FEL EYERKT L + SL DYS+VQPGD +VAFSK DIF+I+ +IE+ T+ +CCVV+G LP ETRS QA+LFN + TGYDVLVASDAIGMGLNLNIRR
Sbjct: 356 GDHFELHEYERKTPLAVAPRSLDGDYSRVQPGDCVVAFSKDDIFAIRRRIEETTSLRCCVVFGALPSETRSQQARLFNDDDTGYDVLVASDAIGMGLNLNIRR 458
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: K8Z929_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z929_NANGC) HSP 1 Score: 140 bits (354), Expect = 1.150e-36 Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD E+++YER TEL + E L DYSKV GD IVAFSK+DI SIK++IE T+HKCC+VYG LP ETRS QA +FN EGTG+DVLVA+DAIGMGLNLNIRR
Sbjct: 479 GDDLEIRKYERMTELTIASEPLL-DYSKVMVGDCIVAFSKSDICSIKQEIEAKTSHKCCMVYGSLPSETRSAQAGIFNEEGTGFDVLVATDAIGMGLNLNIRR 580
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A1E7FUI6_9STRA (RNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUI6_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.920e-35 Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLAND------YSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FEL YER T+L S++SLA + Y VQPGD IVAFS+ DIF+IK +IE TNHKCCV+YG+LP +TR++QA+ FN +GYD+LVASDAIGMGLNLNI+R
Sbjct: 1110 GDDFELHHYERFTDLQVSRKSLARNGKEKGAYRNVQPGDCIVAFSRNDIFAIKREIESMTNHKCCVIYGKLPPQTRADQARRFNDPDSGYDILVASDAIGMGLNLNIKR 1218
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A3M6VRU9_9STRA (RNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU9_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.860e-34 Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FEL+ YER++ L+ S L N+Y++++PGD +VAFS+ DIF IK IE T KCC++YGQLP ETRS QA+LFN G Y+++VASDAIGMGLNLNI+R
Sbjct: 331 GDDFELRSYERRSPLVISSTHL-NNYNQIRPGDCVVAFSRRDIFQIKRDIEIKTGEKCCIIYGQLPPETRSQQARLFNERGNSYNIMVASDAIGMGLNLNIKR 432
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A7S2R202_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R202_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.390e-34 Identity = 64/109 (58.72%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESL--AND----YSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FE++ YER T L ++ES A+D YSKVQ GD ++AF++ DIF+IK +IE T HKCCV+YG LP + R+ QA+ FN + YDVLVASDAIGMGLNLNIRR
Sbjct: 5 GDDFEIRHYERFTPLYVAEESFGAASDTLGSYSKVQSGDCVIAFARNDIFAIKREIENTTPHKCCVIYGSLPPQIRAEQARRFNDPDSDYDVLVASDAIGMGLNLNIRR 113
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A176W0Q0_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0Q0_MARPO) HSP 1 Score: 132 bits (333), Expect = 7.810e-34 Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD EYER L S+ESL D+ +Q GD IVAFS+ DIF IK ++E T H+CCVVYG LP ETR+ QAKLFN + GYDVLVASDAIGMGLNLNIRR
Sbjct: 576 GDELVENEYERFKPLKVSEESLRGDFRNIQAGDCIVAFSRRDIFDIKREVELATKHRCCVVYGALPPETRTQQAKLFNEQDNGYDVLVASDAIGMGLNLNIRR 678
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A2P6TQ59_CHLSO (RNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ59_CHLSO) HSP 1 Score: 131 bits (329), Expect = 2.710e-33 Identity = 65/104 (62.50%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 1 MGDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
MG+SF L EY+R T+L + L Y VQPGD IVAFS+ DI+SIK+ IE+ T H+ CVVYG LP ETR QAKLFN E Y V+VASDA+GMGLNLNIRR
Sbjct: 357 MGESFTLNEYDRFTKLTVEEGGLEGGYGAVQPGDCIVAFSRKDIYSIKQYIEQETKHRACVVYGALPPETRRQQAKLFNEEDNAYRVMVASDAVGMGLNLNIRR 460
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: B5Y521_PHATC (RNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y521_PHATC) HSP 1 Score: 125 bits (315), Expect = 3.540e-33 Identity = 65/109 (59.63%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLA------NDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FEL+ Y+R EL S + LA N Y VQ GD IVAFS+ DIF+IK +IE T++KCCV+YG LP ETRS QA+ FN +GYD+LVASDAI MGLNL+IRR
Sbjct: 156 GDDFELRTYKRFAELKVSVQCLAKSLKDVNSYKNVQAGDCIVAFSRNDIFAIKREIETATSYKCCVIYGSLPPETRSEQARRFNNPNSGYDILVASDAIAMGLNLSIRR 264
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: M4BBS7_HYAAE (RNA helicase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBS7_HYAAE) HSP 1 Score: 130 bits (326), Expect = 6.350e-33 Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD FEL+ YER++ L S L N+YS+++PGD +VAFS+ DIF IK IE T KCC++YGQLP ETRS QA+LFN Y++LVASDAIGMGLNLNI+R
Sbjct: 319 GDEFELRSYERRSPLEISSTHL-NNYSEIRPGDCVVAFSRRDIFQIKRDIEIKTGEKCCIIYGQLPPETRSQQARLFNERDNDYNILVASDAIGMGLNLNIKR 420
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Match: A0A8J5SWL2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SWL2_ZIZPA) HSP 1 Score: 129 bits (324), Expect = 7.410e-33 Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 4 GDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQIEKYTNHKCCVVYGQLPQETRSNQAKLFNAEGTGYDVLVASDAIGMGLNLNIRR 312
GD+ E+++YER L+ ++L D V+ GD IVAFS+ +IF +K IEK+T HKCCV+YG LP ETR QAKLFN + YDVLVASDA+GMGLNLNIRR
Sbjct: 335 GDNLEVRQYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNKYDVLVASDAVGMGLNLNIRR 437 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10647.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10647.1.1 >prot_D-mesarthrocarpus_Contig10647.1.1 ID=prot_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=104bp MGDSFELKEYERKTELIASKESLANDYSKVQPGDAIVAFSKADIFSIKEQback to top mRNA from alignment at D-mesarthrocarpus_Contig10647:1252..2454- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10647.1.1 ID=mRNA_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1203bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10647:1252..2454- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10647:1252..2454- >mRNA_D-mesarthrocarpus_Contig10647.1.1 ID=mRNA_D-mesarthrocarpus_Contig10647.1.1|Name=mRNA_D-mesarthrocarpus_Contig10647.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10647:1252..2454- (Discosporangium mesarthrocarpum MT17_79)back to top |