mRNA_D-mesarthrocarpus_Contig10641.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10641.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10641.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A3D2BTU4_9PROT (MFS domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTU4_9PROT)

HSP 1 Score: 460 bits (1184), Expect = 1.670e-160
Identity = 232/273 (84.98%), Postives = 250/273 (91.58%), Query Frame = 1
Query:    1 MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            M   +P KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTY+FFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GGLMGGTLPVAQAYIADVT  E+RAGRMG MGAAIGAGFVLGPGIGW LTR G GE DFRTAFMIAA VGA+GF+AAL++LREP  R + D+ RS+  RM++FSVAGAT GVL+PL+ILT LAFCMAGLE+TFALWTERQLHWGVREVSIFFLFIG +MVLVQGG+V
Sbjct:    1 MISTSPQKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYAFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGLMGGTLPVAQAYIADVTRPEERAGRMGQMGAAIGAGFVLGPGIGWLLTRAGAGETDFRTAFMIAAAVGAVGFLAALVMLREPAARVRGDEARSIAGRMRSFSVAGATRGVLFPLLILTVLAFCMAGLESTFALWTERQLHWGVREVSIFFLFIGFLMVLVQGGLV 273          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2D8G814_9PROT (MFS domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G814_9PROT)

HSP 1 Score: 444 bits (1143), Expect = 3.170e-154
Identity = 222/273 (81.32%), Postives = 244/273 (89.38%), Query Frame = 1
Query:    1 MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            MT  A  KG+I VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GG+MGGTLPVAQAYIADVT  EDRAGRMGMMGAAIGAGFVLGPGIGW L+  G GEADFRTAFMI+A +G +GF  AL LL+EPP R  +++  S+ ARM++F+ AGAT GVL+PL ILT LAFCMAGLE+TFALWTERQL+W VREVS+FFLFIG +MVLVQGG++
Sbjct:    1 MTNNASAKGSISVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGIMGGTLPVAQAYIADVTRPEDRAGRMGMMGAAIGAGFVLGPGIGWLLSHAGAGEADFRTAFMISAAIGLVGFFGALFLLKEPPAREVSNETHSIAARMRSFTTAGATLGVLFPLTILTILAFCMAGLESTFALWTERQLNWAVREVSVFFLFIGLLMVLVQGGLI 273          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2S6Q5G2_9PROT (Tetracycline resistance protein, class C n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q5G2_9PROT)

HSP 1 Score: 438 bits (1127), Expect = 8.580e-152
Identity = 220/268 (82.09%), Postives = 241/268 (89.93%), Query Frame = 1
Query:   16 PGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            P KGAI VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYS FAF+SSFPWGVISDKWGRRPILCFSMLGTA+SFA VSQADALWMLFAARAFGGLMGGTLPVAQAYIADVT  EDRAGRMG+MGAAIGAGFVLGPGIGW LTR G+G+ DFR AFMIA+ VG  GF+ ALL L+EP  + K D  RS+  RM++FS+AGA P VL+PL+ILT +AFCMAGLE+TFALWTERQL+WGVREVSIFFLFIG +MV+VQGG+V
Sbjct:    6 PRKGAISVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSLFAFMSSFPWGVISDKWGRRPILCFSMLGTAVSFALVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTEPEDRAGRMGLMGAAIGAGFVLGPGIGWLLTRTGSGDTDFRAAFMIASAVGLAGFLVALLFLKEPTAKVKGDGARSIVVRMRSFSIAGAIPSVLFPLLILTVIAFCMAGLESTFALWTERQLNWGVREVSIFFLFIGFLMVIVQGGVV 273          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2D8PQQ8_9PROT (MFS domain-containing protein (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQQ8_9PROT)

HSP 1 Score: 385 bits (990), Expect = 9.810e-132
Identity = 192/225 (85.33%), Postives = 207/225 (92.00%), Query Frame = 1
Query:  145 LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GGLMGGTLPVAQAYIADVTP EDRAGRMG+MGAAIGAGFVLGPGIGW LTR G GE DFRTAF+IAA VGA GF+AAL++LREPP R + D+ R+L  RMKAFS AG+TPGVL PLV+LT LAFCMAGLE+TFALWTERQLHWGVREVSIFFL+IG +MVLVQGG+V
Sbjct:    1 LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGLMGGTLPVAQAYIADVTPAEDRAGRMGLMGAAIGAGFVLGPGIGWLLTRAGAGETDFRTAFLIAAVVGACGFLAALIVLREPPTREEGDENRTLSGRMKAFSTAGSTPGVLLPLVLLTLLAFCMAGLESTFALWTERQLHWGVREVSIFFLYIGFLMVLVQGGIV 225          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6N7FH03_9PROT (MFS transporter (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FH03_9PROT)

HSP 1 Score: 353 bits (906), Expect = 7.010e-121
Identity = 167/223 (74.89%), Postives = 193/223 (86.55%), Query Frame = 1
Query:  100 FWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSI 768
            FWAER+GASP  V +LF+TYS FAFLSSFPWGVISDKWGRRPI+C SMLG+A+SFAWVSQAD LWMLFAARA GGLMGGTLPVAQAYIAD+TP+ +RAGRMG+MGAAIGAGFVLGPGIGWALTR G G+ DF+TAF++AAG+   GF+AA+ LLREP    +    RS+  RMKAF++AG TP VLYPL+ILT +AFCM GLE+TFA+WTERQLHWGVRE +I
Sbjct:    2 FWAERFGASPAMVAILFATYSLFAFLSSFPWGVISDKWGRRPIMCASMLGSAVSFAWVSQADTLWMLFAARALGGLMGGTLPVAQAYIADITPKAERAGRMGLMGAAIGAGFVLGPGIGWALTRFGHGDTDFQTAFLVAAGISLTGFLAAVALLREPARHEEVGQDRSIGGRMKAFAIAGRTPAVLYPLIILTLIAFCMGGLESTFAMWTERQLHWGVRENAI 224          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6L8A1U6_9PROT (MFS transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6L8A1U6_9PROT)

HSP 1 Score: 223 bits (569), Expect = 4.940e-67
Identity = 120/261 (45.98%), Postives = 166/261 (63.60%), Query Frame = 1
Query:   37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            VL LIVF DM+ FG+IIP  PFW + +GA+ FE+ L+ S YS   F+ +FP G +SD+ GR+PIL FS+LG+ +SF  V  AD+L M+  ARA GG M   + VA AY+ADVT  E+RA  MG++GA+IGAGFVLGP IG  +          + AF + A + A   +AA+ LL+EP     + +     AR++ F +A + P VL P+ +       MAGLEAT+ALW   +  WG RE  +FF +IG ++V+VQGG+V
Sbjct:   20 VLCLIVFIDMVGFGVIIPSQPFWTKSFGATAFEIALVMSVYSACQFVFAFPLGWLSDRVGRKPILLFSLLGSVVSFTLVGLADSLLMIVLARALGGAMSANIAVAYAYVADVTGGEERARAMGLLGASIGAGFVLGPFIGGVVAGPDPANPG-QIAFFVGAAISAFALIAAIPLLKEPVSHRSSAETGGFRARLRGFGLALSIPIVLIPIAVAGIAGLAMAGLEATYALWVNEEHGWGARETGLFFGYIGVLLVIVQGGLV 279          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6N8XRT4_9PROT (MFS transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N8XRT4_9PROT)

HSP 1 Score: 214 bits (545), Expect = 1.740e-63
Identity = 115/261 (44.06%), Postives = 163/261 (62.45%), Query Frame = 1
Query:   37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            VL LIVF DM+ FG+IIP  PFW + +GA+ FE+ L+ S Y+   F+ +FP G +SD+ GR+PIL  S+ G+ ISF  V  A++L M+  ARA GG+MG  + VA AY+ADVT  E+RA  MG++GA+IGAGFVLGP IG A+          +  F + A + A+  VAALL+L+EP       +  S   R++ F++  + P VL P+ +       M GLEAT+ALW      WG RE  +FF +IG ++V+VQ  ++
Sbjct:   20 VLCLIVFIDMVGFGVIIPSQPFWTKSFGATAFEIALIMSVYAGCQFVFAFPLGWLSDRVGRKPILILSLCGSVISFTLVGLAESLLMIVLARALGGVMGANIAVAYAYVADVTSGEERARAMGLLGASIGAGFVLGPFIGGAVAGPDPANPG-QIGFFVGAAISAVAVVAALLILKEPASHRSNAETGSFRGRLRGFALTLSIPVVLIPIAVAGLAGLAMTGLEATYALWVNEVHGWGARETGLFFGYIGVLLVVVQASLI 279          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2S6UIM7_9PROT (Tetracycline resistance protein, class C n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin4 TaxID=2013070 RepID=A0A2S6UIM7_9PROT)

HSP 1 Score: 209 bits (531), Expect = 8.720e-62
Identity = 122/264 (46.21%), Postives = 162/264 (61.36%), Query Frame = 1
Query:   37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRA--KTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLA-FCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            +L LIV  D++ FG+IIP  PF+ E Y A+P  V LL +TYSF  FL++  WG +SD+ GRRP+L  S+ G A+S+ W+  AD+LWMLFAARA GG M G +  A AY+ADVT RE+RA  MG++GAA G GF++GP +G  L       ADF+     AAG      V AL LL+E       K   Q+    R++ F  A + P V   L+ ++FLA F  AGLEATFA+W+ RQ  WG  +    F F+G +  +VQG MV
Sbjct:    3 ILFLIVVIDLIGFGVIIPLLPFYGEYYQAAPATVGLLMATYSFAQFLAAPFWGRLSDRTGRRPVLLISLCGAALSYVWLGFADSLWMLFAARAMGGFMAGNISTAFAYVADVTTRENRARGMGVIGAAFGLGFIIGPAVGGLLAGPDPVNADFQRPAFAAAGFSFAALVLALFLLKESLSEETRKRLAQQPPRTRIQLFRQALSRPNVAL-LIGMSFLATFAFAGLEATFAMWSRRQFGWGPEQNGYLFAFVGLLGAIVQGRMV 265          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A537R1X9_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R1X9_9PROT)

HSP 1 Score: 209 bits (532), Expect = 1.660e-61
Identity = 116/267 (43.45%), Postives = 164/267 (61.42%), Query Frame = 1
Query:   22 KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREP-PMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            +G++ +L LIVF D++ FG+IIP  PF+AER+GASP  VT L + +S  A +S+  WG +SD+ GRRP+L  SM   A+++ W+  A  LWMLFAARAF G+  G +  AQAYIADVTP E RA  MGM+GAA G GF++GP +G  +       AD  +  +IAAG+ A  F+  +LLL E  P   +    R    R+ A S A   P +   LV+   +    AG+E+TFALW  RQ  WG  ++   F ++G +  ++QGG++
Sbjct:   26 QGSMPILFLIVFVDLVGFGLIIPLLPFYAERFGASPQLVTALLAVFSLMAMISAPLWGRLSDRIGRRPVLMASMAAAALAYLWLGLASELWMLFAARAFAGICAGNIAAAQAYIADVTPPEKRARGMGMIGAAFGLGFIIGPALGGLVAGNELATADLVSPGVIAAGLSAAAFLGVILLLPESLPTAVRRRPGRG---RIAALSSAFRRPLLARLLVVFFLVILAFAGMESTFALWAMRQYGWGPAQIGYVFTYVGLLSAVMQGGLI 289          
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A537VCH9_9PROT (MFS transporter n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VCH9_9PROT)

HSP 1 Score: 205 bits (521), Expect = 4.620e-60
Identity = 112/267 (41.95%), Postives = 160/267 (59.93%), Query Frame = 1
Query:   22 KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREP-PMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
            +GA+ +L LIVF D++ FG+IIP  PF+AER+GASP  VT+L + +S  + +S+  WG ISD+ GRRP+L  SML  A ++ W+  A  LWMLFAARAF GL  G +  AQAYIADVTP E RA  MGM+GAA G GF++GP +G  +       AD +   +IAAG+    F+  +L L E  P   +    RS   R+         P +   + +   +    AG+E+TFA+W  RQ  WG  ++   F ++G +  ++QGG++
Sbjct:   12 RGAMPILFLIVFVDLVGFGLIIPLLPFYAERFGASPQVVTILLAIFSLMSMISAPLWGRISDRIGRRPVLMASMLAAAFAYLWLGFATELWMLFAARAFAGLCAGNIAAAQAYIADVTPPERRARGMGMIGAAFGLGFIIGPALGGIVAGNELATADLQAPGLIAAGLSFAAFLGVVLFLPESLPTAVRARQSRS---RIAVLQSVLRRPMLARLVAVFFLVILAFAGMESTFAMWAMRQFGWGPAQIGYVFTYVGLLSAVMQGGLI 275          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D2BTU4_9PROT1.670e-16084.98MFS domain-containing protein n=2 Tax=Rhodospirill... [more]
A0A2D8G814_9PROT3.170e-15481.32MFS domain-containing protein n=1 Tax=Alphaproteob... [more]
A0A2S6Q5G2_9PROT8.580e-15282.09Tetracycline resistance protein, class C n=1 Tax=A... [more]
A0A2D8PQQ8_9PROT9.810e-13285.33MFS domain-containing protein (Fragment) n=1 Tax=R... [more]
A0A6N7FH03_9PROT7.010e-12174.89MFS transporter (Fragment) n=1 Tax=Alphaproteobact... [more]
A0A6L8A1U6_9PROT4.940e-6745.98MFS transporter n=2 Tax=Rhodospirillaceae bacteriu... [more]
A0A6N8XRT4_9PROT1.740e-6344.06MFS transporter n=2 Tax=Rhodospirillaceae bacteriu... [more]
A0A2S6UIM7_9PROT8.720e-6246.21Tetracycline resistance protein, class C n=1 Tax=A... [more]
A0A537R1X9_9PROT1.660e-6143.45MFS transporter n=1 Tax=Alphaproteobacteria bacter... [more]
A0A537VCH9_9PROT4.620e-6041.95MFS transporter n=3 Tax=Alphaproteobacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10641contigD-mesarthrocarpus_Contig10641:3372..4190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1380394.JADL01000001_gene3101
PFAMsMFS_1
Model size819
Max annot lvl204441|Rhodospirillales
KEGG koko:K08151
KEGG TC2.A.1.2.38,2.A.1.2.39,2.A.1.2.4,2.A.1.2.41,2.A.1.2.68,2.A.1.2.75
KEGG ModuleM00668
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.65e-59
EggNOG OGsCOG0477@1|root,COG2814@2|Bacteria,1MVSH@1224|Proteobacteria,2TUEW@28211|Alphaproteobacteria,2JV5D@204441|Rhodospirillales
DescriptionSugar (and other) transporter
Cds size819
COG categoryEGP
BRITEko00000,ko00002,ko01504,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789199.961194-CDS-D-mesarthrocarpus_Contig10641:3371..41901680789199.961194-CDS-D-mesarthrocarpus_Contig10641:3371..4190Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10641 3372..4190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10641.2.1prot_D-mesarthrocarpus_Contig10641.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10641 3372..4190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10641.2.1

>prot_D-mesarthrocarpus_Contig10641.2.1 ID=prot_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=273bp
MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLF
STYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWML
FAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPG
IGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQR
SLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWG
VREVSIFFLFIGGIMVLVQGGMV
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mRNA from alignment at D-mesarthrocarpus_Contig10641:3372..4190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10641.2.1 ID=mRNA_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=819bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ (Discosporangium mesarthrocarpum MT17_79)
ATGACTAAAAAGGCCCCCGGTAAGGGAGCGATCGGCGTTCTTCTGCTGAT CGTTTTTTTCGACATGCTGGCATTCGGGATCATCATCCCGTTTACGCCGT TCTGGGCCGAAAGGTACGGCGCGTCGCCGTTCGAGGTGACGCTGCTGTTC TCGACCTACTCGTTCTTTGCTTTTCTCTCATCGTTTCCGTGGGGCGTCAT CAGCGACAAATGGGGACGACGTCCCATCCTGTGCTTCAGCATGCTGGGCA CGGCGATATCGTTTGCCTGGGTGAGTCAGGCGGATGCGCTGTGGATGCTG TTCGCCGCCCGTGCCTTCGGCGGGCTGATGGGCGGCACGCTGCCGGTCGC GCAGGCCTATATCGCGGATGTCACACCGCGCGAAGACCGTGCCGGGCGCA TGGGCATGATGGGGGCTGCAATCGGCGCGGGTTTTGTTCTCGGTCCGGGG ATCGGCTGGGCGCTGACCCGGCTCGGCACCGGCGAGGCCGACTTCCGCAC CGCGTTCATGATTGCCGCCGGTGTCGGCGCGCTGGGCTTTGTCGCAGCAC TTCTGTTGCTCCGGGAACCGCCGATGCGTGCAAAGACCGACGACCAGCGC AGTCTGCCGGCGCGGATGAAGGCGTTTTCGGTGGCGGGGGCGACCCCGGG GGTATTGTATCCGCTTGTCATCCTGACGTTCCTTGCATTCTGCATGGCGG GACTTGAAGCGACGTTTGCGCTCTGGACCGAGCGCCAGCTTCACTGGGGT GTGCGCGAGGTCAGCATCTTCTTTCTCTTTATCGGCGGCATCATGGTGCT GGTACAGGGCGGCATGGTA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10641:3372..4190+

>mRNA_D-mesarthrocarpus_Contig10641.2.1 ID=mRNA_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=819bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ (Discosporangium mesarthrocarpum MT17_79)
ATGACTAAAAAGGCCCCCGGTAAGGGAGCGATCGGCGTTCTTCTGCTGAT
CGTTTTTTTCGACATGCTGGCATTCGGGATCATCATCCCGTTTACGCCGT
TCTGGGCCGAAAGGTACGGCGCGTCGCCGTTCGAGGTGACGCTGCTGTTC
TCGACCTACTCGTTCTTTGCTTTTCTCTCATCGTTTCCGTGGGGCGTCAT
CAGCGACAAATGGGGACGACGTCCCATCCTGTGCTTCAGCATGCTGGGCA
CGGCGATATCGTTTGCCTGGGTGAGTCAGGCGGATGCGCTGTGGATGCTG
TTCGCCGCCCGTGCCTTCGGCGGGCTGATGGGCGGCACGCTGCCGGTCGC
GCAGGCCTATATCGCGGATGTCACACCGCGCGAAGACCGTGCCGGGCGCA
TGGGCATGATGGGGGCTGCAATCGGCGCGGGTTTTGTTCTCGGTCCGGGG
ATCGGCTGGGCGCTGACCCGGCTCGGCACCGGCGAGGCCGACTTCCGCAC
CGCGTTCATGATTGCCGCCGGTGTCGGCGCGCTGGGCTTTGTCGCAGCAC
TTCTGTTGCTCCGGGAACCGCCGATGCGTGCAAAGACCGACGACCAGCGC
AGTCTGCCGGCGCGGATGAAGGCGTTTTCGGTGGCGGGGGCGACCCCGGG
GGTATTGTATCCGCTTGTCATCCTGACGTTCCTTGCATTCTGCATGGCGG
GACTTGAAGCGACGTTTGCGCTCTGGACCGAGCGCCAGCTTCACTGGGGT
GTGCGCGAGGTCAGCATCTTCTTTCTCTTTATCGGCGGCATCATGGTGCT
GGTACAGGGCGGCATGGTA
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