mRNA_D-mesarthrocarpus_Contig10641.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A3D2BTU4_9PROT (MFS domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BTU4_9PROT) HSP 1 Score: 460 bits (1184), Expect = 1.670e-160 Identity = 232/273 (84.98%), Postives = 250/273 (91.58%), Query Frame = 1
Query: 1 MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
M +P KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTY+FFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GGLMGGTLPVAQAYIADVT E+RAGRMG MGAAIGAGFVLGPGIGW LTR G GE DFRTAFMIAA VGA+GF+AAL++LREP R + D+ RS+ RM++FSVAGAT GVL+PL+ILT LAFCMAGLE+TFALWTERQLHWGVREVSIFFLFIG +MVLVQGG+V
Sbjct: 1 MISTSPQKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYAFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGLMGGTLPVAQAYIADVTRPEERAGRMGQMGAAIGAGFVLGPGIGWLLTRAGAGETDFRTAFMIAAAVGAVGFLAALVMLREPAARVRGDEARSIAGRMRSFSVAGATRGVLFPLLILTVLAFCMAGLESTFALWTERQLHWGVREVSIFFLFIGFLMVLVQGGLV 273
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2D8G814_9PROT (MFS domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G814_9PROT) HSP 1 Score: 444 bits (1143), Expect = 3.170e-154 Identity = 222/273 (81.32%), Postives = 244/273 (89.38%), Query Frame = 1
Query: 1 MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
MT A KG+I VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GG+MGGTLPVAQAYIADVT EDRAGRMGMMGAAIGAGFVLGPGIGW L+ G GEADFRTAFMI+A +G +GF AL LL+EPP R +++ S+ ARM++F+ AGAT GVL+PL ILT LAFCMAGLE+TFALWTERQL+W VREVS+FFLFIG +MVLVQGG++
Sbjct: 1 MTNNASAKGSISVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGIMGGTLPVAQAYIADVTRPEDRAGRMGMMGAAIGAGFVLGPGIGWLLSHAGAGEADFRTAFMISAAIGLVGFFGALFLLKEPPAREVSNETHSIAARMRSFTTAGATLGVLFPLTILTILAFCMAGLESTFALWTERQLNWAVREVSVFFLFIGLLMVLVQGGLI 273
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2S6Q5G2_9PROT (Tetracycline resistance protein, class C n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q5G2_9PROT) HSP 1 Score: 438 bits (1127), Expect = 8.580e-152 Identity = 220/268 (82.09%), Postives = 241/268 (89.93%), Query Frame = 1
Query: 16 PGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
P KGAI VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYS FAF+SSFPWGVISDKWGRRPILCFSMLGTA+SFA VSQADALWMLFAARAFGGLMGGTLPVAQAYIADVT EDRAGRMG+MGAAIGAGFVLGPGIGW LTR G+G+ DFR AFMIA+ VG GF+ ALL L+EP + K D RS+ RM++FS+AGA P VL+PL+ILT +AFCMAGLE+TFALWTERQL+WGVREVSIFFLFIG +MV+VQGG+V
Sbjct: 6 PRKGAISVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSLFAFMSSFPWGVISDKWGRRPILCFSMLGTAVSFALVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTEPEDRAGRMGLMGAAIGAGFVLGPGIGWLLTRTGSGDTDFRAAFMIASAVGLAGFLVALLFLKEPTAKVKGDGARSIVVRMRSFSIAGAIPSVLFPLLILTVIAFCMAGLESTFALWTERQLNWGVREVSIFFLFIGFLMVIVQGGVV 273
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2D8PQQ8_9PROT (MFS domain-containing protein (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQQ8_9PROT) HSP 1 Score: 385 bits (990), Expect = 9.810e-132 Identity = 192/225 (85.33%), Postives = 207/225 (92.00%), Query Frame = 1
Query: 145 LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTA+SFAWVSQADALWMLFAARA GGLMGGTLPVAQAYIADVTP EDRAGRMG+MGAAIGAGFVLGPGIGW LTR G GE DFRTAF+IAA VGA GF+AAL++LREPP R + D+ R+L RMKAFS AG+TPGVL PLV+LT LAFCMAGLE+TFALWTERQLHWGVREVSIFFL+IG +MVLVQGG+V
Sbjct: 1 LFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTALSFAWVSQADALWMLFAARALGGLMGGTLPVAQAYIADVTPAEDRAGRMGLMGAAIGAGFVLGPGIGWLLTRAGAGETDFRTAFLIAAVVGACGFLAALIVLREPPTREEGDENRTLSGRMKAFSTAGSTPGVLLPLVLLTLLAFCMAGLESTFALWTERQLHWGVREVSIFFLYIGFLMVLVQGGIV 225
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6N7FH03_9PROT (MFS transporter (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FH03_9PROT) HSP 1 Score: 353 bits (906), Expect = 7.010e-121 Identity = 167/223 (74.89%), Postives = 193/223 (86.55%), Query Frame = 1
Query: 100 FWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSI 768
FWAER+GASP V +LF+TYS FAFLSSFPWGVISDKWGRRPI+C SMLG+A+SFAWVSQAD LWMLFAARA GGLMGGTLPVAQAYIAD+TP+ +RAGRMG+MGAAIGAGFVLGPGIGWALTR G G+ DF+TAF++AAG+ GF+AA+ LLREP + RS+ RMKAF++AG TP VLYPL+ILT +AFCM GLE+TFA+WTERQLHWGVRE +I
Sbjct: 2 FWAERFGASPAMVAILFATYSLFAFLSSFPWGVISDKWGRRPIMCASMLGSAVSFAWVSQADTLWMLFAARALGGLMGGTLPVAQAYIADITPKAERAGRMGLMGAAIGAGFVLGPGIGWALTRFGHGDTDFQTAFLVAAGISLTGFLAAVALLREPARHEEVGQDRSIGGRMKAFAIAGRTPAVLYPLIILTLIAFCMGGLESTFAMWTERQLHWGVRENAI 224
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6L8A1U6_9PROT (MFS transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6L8A1U6_9PROT) HSP 1 Score: 223 bits (569), Expect = 4.940e-67 Identity = 120/261 (45.98%), Postives = 166/261 (63.60%), Query Frame = 1
Query: 37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
VL LIVF DM+ FG+IIP PFW + +GA+ FE+ L+ S YS F+ +FP G +SD+ GR+PIL FS+LG+ +SF V AD+L M+ ARA GG M + VA AY+ADVT E+RA MG++GA+IGAGFVLGP IG + + AF + A + A +AA+ LL+EP + + AR++ F +A + P VL P+ + MAGLEAT+ALW + WG RE +FF +IG ++V+VQGG+V
Sbjct: 20 VLCLIVFIDMVGFGVIIPSQPFWTKSFGATAFEIALVMSVYSACQFVFAFPLGWLSDRVGRKPILLFSLLGSVVSFTLVGLADSLLMIVLARALGGAMSANIAVAYAYVADVTGGEERARAMGLLGASIGAGFVLGPFIGGVVAGPDPANPG-QIAFFVGAAISAFALIAAIPLLKEPVSHRSSAETGGFRARLRGFGLALSIPIVLIPIAVAGIAGLAMAGLEATYALWVNEEHGWGARETGLFFGYIGVLLVIVQGGLV 279
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A6N8XRT4_9PROT (MFS transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N8XRT4_9PROT) HSP 1 Score: 214 bits (545), Expect = 1.740e-63 Identity = 115/261 (44.06%), Postives = 163/261 (62.45%), Query Frame = 1
Query: 37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
VL LIVF DM+ FG+IIP PFW + +GA+ FE+ L+ S Y+ F+ +FP G +SD+ GR+PIL S+ G+ ISF V A++L M+ ARA GG+MG + VA AY+ADVT E+RA MG++GA+IGAGFVLGP IG A+ + F + A + A+ VAALL+L+EP + S R++ F++ + P VL P+ + M GLEAT+ALW WG RE +FF +IG ++V+VQ ++
Sbjct: 20 VLCLIVFIDMVGFGVIIPSQPFWTKSFGATAFEIALIMSVYAGCQFVFAFPLGWLSDRVGRKPILILSLCGSVISFTLVGLAESLLMIVLARALGGVMGANIAVAYAYVADVTSGEERARAMGLLGASIGAGFVLGPFIGGAVAGPDPANPG-QIGFFVGAAISAVAVVAALLILKEPASHRSNAETGSFRGRLRGFALTLSIPVVLIPIAVAGLAGLAMTGLEATYALWVNEVHGWGARETGLFFGYIGVLLVVVQASLI 279
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A2S6UIM7_9PROT (Tetracycline resistance protein, class C n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin4 TaxID=2013070 RepID=A0A2S6UIM7_9PROT) HSP 1 Score: 209 bits (531), Expect = 8.720e-62 Identity = 122/264 (46.21%), Postives = 162/264 (61.36%), Query Frame = 1
Query: 37 VLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREPPMRA--KTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLA-FCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
+L LIV D++ FG+IIP PF+ E Y A+P V LL +TYSF FL++ WG +SD+ GRRP+L S+ G A+S+ W+ AD+LWMLFAARA GG M G + A AY+ADVT RE+RA MG++GAA G GF++GP +G L ADF+ AAG V AL LL+E K Q+ R++ F A + P V L+ ++FLA F AGLEATFA+W+ RQ WG + F F+G + +VQG MV
Sbjct: 3 ILFLIVVIDLIGFGVIIPLLPFYGEYYQAAPATVGLLMATYSFAQFLAAPFWGRLSDRTGRRPVLLISLCGAALSYVWLGFADSLWMLFAARAMGGFMAGNISTAFAYVADVTTRENRARGMGVIGAAFGLGFIIGPAVGGLLAGPDPVNADFQRPAFAAAGFSFAALVLALFLLKESLSEETRKRLAQQPPRTRIQLFRQALSRPNVAL-LIGMSFLATFAFAGLEATFAMWSRRQFGWGPEQNGYLFAFVGLLGAIVQGRMV 265
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A537R1X9_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R1X9_9PROT) HSP 1 Score: 209 bits (532), Expect = 1.660e-61 Identity = 116/267 (43.45%), Postives = 164/267 (61.42%), Query Frame = 1
Query: 22 KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREP-PMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
+G++ +L LIVF D++ FG+IIP PF+AER+GASP VT L + +S A +S+ WG +SD+ GRRP+L SM A+++ W+ A LWMLFAARAF G+ G + AQAYIADVTP E RA MGM+GAA G GF++GP +G + AD + +IAAG+ A F+ +LLL E P + R R+ A S A P + LV+ + AG+E+TFALW RQ WG ++ F ++G + ++QGG++
Sbjct: 26 QGSMPILFLIVFVDLVGFGLIIPLLPFYAERFGASPQLVTALLAVFSLMAMISAPLWGRLSDRIGRRPVLMASMAAAALAYLWLGLASELWMLFAARAFAGICAGNIAAAQAYIADVTPPEKRARGMGMIGAAFGLGFIIGPALGGLVAGNELATADLVSPGVIAAGLSAAAFLGVILLLPESLPTAVRRRPGRG---RIAALSSAFRRPLLARLLVVFFLVILAFAGMESTFALWAMRQYGWGPAQIGYVFTYVGLLSAVMQGGLI 289
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Match: A0A537VCH9_9PROT (MFS transporter n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VCH9_9PROT) HSP 1 Score: 205 bits (521), Expect = 4.620e-60 Identity = 112/267 (41.95%), Postives = 160/267 (59.93%), Query Frame = 1
Query: 22 KGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFSTYSFFAFLSSFPWGVISDKWGRRPILCFSMLGTAISFAWVSQADALWMLFAARAFGGLMGGTLPVAQAYIADVTPREDRAGRMGMMGAAIGAGFVLGPGIGWALTRLGTGEADFRTAFMIAAGVGALGFVAALLLLREP-PMRAKTDDQRSLPARMKAFSVAGATPGVLYPLVILTFLAFCMAGLEATFALWTERQLHWGVREVSIFFLFIGGIMVLVQGGMV 819
+GA+ +L LIVF D++ FG+IIP PF+AER+GASP VT+L + +S + +S+ WG ISD+ GRRP+L SML A ++ W+ A LWMLFAARAF GL G + AQAYIADVTP E RA MGM+GAA G GF++GP +G + AD + +IAAG+ F+ +L L E P + RS R+ P + + + + AG+E+TFA+W RQ WG ++ F ++G + ++QGG++
Sbjct: 12 RGAMPILFLIVFVDLVGFGLIIPLLPFYAERFGASPQVVTILLAIFSLMSMISAPLWGRISDRIGRRPVLMASMLAAAFAYLWLGFATELWMLFAARAFAGLCAGNIAAAQAYIADVTPPERRARGMGMIGAAFGLGFIIGPALGGIVAGNELATADLQAPGLIAAGLSFAAFLGVVLFLPESLPTAVRARQSRS---RIAVLQSVLRRPMLARLVAVFFLVILAFAGMESTFAMWAMRQFGWGPAQIGYVFTYVGLLSAVMQGGLI 275 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10641.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10641.2.1 >prot_D-mesarthrocarpus_Contig10641.2.1 ID=prot_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=273bp MTKKAPGKGAIGVLLLIVFFDMLAFGIIIPFTPFWAERYGASPFEVTLLFback to top mRNA from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10641.2.1 ID=mRNA_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=819bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ >mRNA_D-mesarthrocarpus_Contig10641.2.1 ID=mRNA_D-mesarthrocarpus_Contig10641.2.1|Name=mRNA_D-mesarthrocarpus_Contig10641.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=819bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10641:3372..4190+ (Discosporangium mesarthrocarpum MT17_79)back to top |