mRNA_D-mesarthrocarpus_Contig10640.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10640.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig10640.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10640.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10640contigD-mesarthrocarpus_Contig10640:95..3330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size1830
Hectar predicted targeting categoryother localisation
Exons4
Cds size1827
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789199.8373787-CDS-D-mesarthrocarpus_Contig10640:96..7631680789199.8373787-CDS-D-mesarthrocarpus_Contig10640:96..763Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10640 97..763 -
1680789199.8524904-CDS-D-mesarthrocarpus_Contig10640:1361..17561680789199.8524904-CDS-D-mesarthrocarpus_Contig10640:1361..1756Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10640 1362..1756 -
1680789199.865141-CDS-D-mesarthrocarpus_Contig10640:2066..25631680789199.865141-CDS-D-mesarthrocarpus_Contig10640:2066..2563Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10640 2067..2563 -
1680789199.8752663-CDS-D-mesarthrocarpus_Contig10640:3062..33301680789199.8752663-CDS-D-mesarthrocarpus_Contig10640:3062..3330Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10640 3063..3330 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10640.1.2prot_D-mesarthrocarpus_Contig10640.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10640 97..3330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10640.1.2

>prot_D-mesarthrocarpus_Contig10640.1.2 ID=prot_D-mesarthrocarpus_Contig10640.1.2|Name=mRNA_D-mesarthrocarpus_Contig10640.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=609bp
PKTSLIWQVFEEGPPDKEGRNAVCTVPVGSTGTPCGARFKYNSGHGTSAL
MRHLRNQHIQAFNEAECSKNRGSASTTATGSRATTAVTSGQGSGGIGVSS
IAGPSRAVNSCGSSKKRKEECGRYVLMCCMGMLPLDTMTEPCFSPLLEHL
SPGYSWRSLSPEEVNKQFIHLYDGLVDDITRSLKSHHQLCQRFGYKGPCF
GVQVGRSRGYGAVEFCTLTVSFIPADFRGVERLALSMRPFFDPPDESGMK
TWIKQVTAEWFGFMGSSVCPSDVYLCATTRQGCSSSEAFEALGVPLMACS
VHRLGSCVESGLGLTWSPGGDPTQSPAQGAATGASKNPEMGRMVTAAMDD
AEKFVLLAPGSFTPGEMQADRDRLGMVLHRRHVYDTRWTSVHASLNLIIH
LQPALDRYYSHNQDAHPQAPAPASTKWQAIREAVSVLDASAEAGAVIGGE
KGVFIGQAIRTMLDLHTVFKMDTQEIRGGEGKVDGGVVQETAVSSLAGPT
RVLLGTLDAEMVHHGLGEARGGTEKIALLLDPRLKMCRPDTCRNGGSALA
VSATETLQSILKELCGWNTEASNNSSNCNSDSKSNPLVLEQSQPLWPTPF
STSPVMGAS
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mRNA from alignment at D-mesarthrocarpus_Contig10640:95..3330-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10640.1.2 ID=mRNA_D-mesarthrocarpus_Contig10640.1.2|Name=mRNA_D-mesarthrocarpus_Contig10640.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3236bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10640:95..3330- (Discosporangium mesarthrocarpum MT17_79)
CCCAAGACCTCGTTGATATGGCAGGTTTTCGAGGAGGGTCCGCCGGACAA
AGAGGGTAGAAATGCTGTGTGTACGGTGCCTGTTGGTTCTACAGGGACCC
CGTGCGGTGCCCGGTTCAAGTATAACTCTGGTCACGGCACGAGTGCCTTG
ATGCGACATCTTCGAAATCAGCATATTCAGGCTTTCAATGAGGCCGAGTG
CTCAAAAAACCGAGGATCTGCGTCAACAACCGCAACCGGCTCGAGGGCGA
CAACAGCGGTGACAAGTGGTGAGCCTTTGATGGTCTGATGGGAACAGCAT
GTGTCGAGGGGACCTTCTTGCTTCGAGAAATGATGGCGAGCTGAATGTCG
GCAAAGGGAGTATGGAATTGGCAGTTGGCACATTGTAAATGTCACTTCGA
CAAACAATACGACAATACAGTACAACCCTCGCAGGATTTGGGGGACGGGG
AACGTCTATTCCATAAATATCACTGGTGCAGCGTTGAAAGTGCTTATCAA
ATCGGCGGAGAGAGCGTGGGGTGGGTACGCTGGGAAGGTGAATGGCAATT
TAAGTTGGTCACGGGGAACGTTTATTCGATCGTTGGTTATCCCTGGTGCG
GGATGCAAAGTGCTCACCCAACATGATATTTTCACTGCTTTGTCAATATC
CAGTACGGTAGGCTCGTAGTTTCCTGTCAGTGTGATTCCAGGGTGCACCT
AACAACGCTGTAATAGTGACATCTGATACTTGCCATGTGCTCCCTAACTC
AATTTCATACCCTCCAGGACAGGGCAGTGGTGGTATTGGGGTTTCTTCAA
TCGCAGGACCAAGCCGTGCTGTCAATAGCTGCGGCTCGAGCAAGAAGCGG
AAGGAGGAGTGCGGTCGGTACGTGCTCATGTGCTGCATGGGAATGTTGCC
GCTGGACACGATGACCGAGCCGTGCTTCAGCCCACTTCTCGAGCATCTCT
CCCCCGGGTATTCCTGGAGATCTCTCTCCCCGGAGGAGGTCAACAAGCAG
TTCATCCACCTGTACGATGGACTCGTTGATGACATCACCCGCAGCCTGAA
ATCCCATCACCAGTTATGCCAAAGGTTTGGGTACAAGGGCCCTTGTTTCG
GAGTCCAAGTGGGTCGCAGCAGGGGGTATGGGGCGGTGGAGTTCTGCACA
CTGACGGTCTCCTTCATCCCGGCAGACTTCAGGGGGGTTGAGAGACTTGC
CCTGTCCATGAGGCCATTCTTTGACCCACCTGATGAGAGCGGGATGAAGA
CATGGATAAAACAGGTTGGCAGCAAGGGCATGTGATATGAATAGGTCTCT
TGCCCTCGGTCGTGTCTAATGTGCTCCGCCCAATTGTGTTTTGCGCTCAC
CTCCAATGCAGCTGCTTGAGTTCTAGCACCCGAAAATGTTCATGTCATGT
CCTTCTCTAACCCCAGGGCAAGTCGTGTTCCCCCCCTCACCCTGTGTGCC
TCGACTGAGCGTACCCGTCCATGCCACTCCGTAGTGTAACTCAAACAACA
AAATGTGTGTTTTTTATGGCTTCTTCTGCGTGCGTCTTGTGTCTGGTGTA
CGTGCGCCGGCTTTGTGGTGGAAGGTGACCGCAGAATGGTTTGGCTTCAT
GGGCAGCAGCGTATGCCCCAGCGATGTCTACCTTTGTGCAACCACCAGGC
AGGGGTGCAGCAGCTCTGAGGCGTTTGAGGCATTGGGAGTTCCATTGATG
GCGTGCAGCGTGCACCGCCTGGGCTCATGTGTTGAGAGTGGGCTTGGGCT
GACCTGGTCACCCGGTGGCGACCCCACCCAGAGCCCTGCCCAGGGTGCCG
CTACCGGGGCCAGCAAGAACCCAGAGATGGGAAGGATGGTGACCGCTGCA
ATGGATGATGCGGAGAAGTTTGTCCTCCTGGCTCCGGGATCCTTCACGCC
GGGGGAGATGCAGGCTGACAGGGATAGGTTAGGGATGGTGCTGCACAGGC
GCCATGTGTACGACACAAGGTAATGGCAGCACCCCTCTGAGCTGCTACTT
GTAGGGGCATACCTCTGCCCTATGTGCCTTGCCCTGGATGAGACCCTCCT
TTTGTATTTTTTCGGCACCCAAGGGTTGTGCTAGACCCTAGGGGCAAACA
CAACTTCTCAGCCATGCCTGGGACCTCCACCCTCCCACCCACCCACCCAC
CCATTGGCAACCTACTTGACTGTGCCACCATGGCTACACTCCTGCCCGCT
CTTCATAGCTCTCCCCATTCCCTCCTCGTTTGACGAGGCCCTCTGTAGAC
CGGCCCTATTTCCTTCCATCATCCTTTATAACTTGTGTACTATTACCGCC
CTTCAGTTTTCCTCGTCCTTTGTCAATGCTCTGAAATACTTCGAACTGCA
GTGCGTGTTTTGATATCAGTATTGCTTGATACTTGGATGTACTCCGAGGG
ACAAAGTACGAGGTGGGTGGACTCTGTGTTTCACATTAGACAGTAGAGAT
AACTCTCCCATATTACCCCCCTGTGCCTGCGTGAACTGCATTAGAGCGCT
TGAACCCCTGCACATGGCTGCCTGACCACCATGATCAACCCCTTTCCCCC
CCCCTGCTGACCAGCAGGTGGACATCGGTGCACGCATCCCTTAACCTCAT
TATTCATCTCCAGCCAGCCCTGGACAGGTACTACAGCCACAACCAGGATG
CCCACCCTCAGGCCCCGGCCCCGGCCTCCACCAAGTGGCAGGCAATCCGG
GAGGCAGTGAGTGTGCTTGATGCCTCAGCAGAGGCTGGTGCCGTAATTGG
TGGGGAGAAAGGTGTCTTCATAGGCCAGGCCATCCGGACCATGCTTGACC
TGCACACGGTGTTCAAGATGGATACCCAGGAGATCCGTGGCGGAGAGGGG
AAGGTTGATGGTGGGGTGGTCCAGGAGACCGCGGTGAGCTCCCTTGCGGG
GCCCACAAGGGTGCTCCTGGGCACCCTGGATGCGGAAATGGTGCATCATG
GCCTTGGGGAGGCCAGGGGGGGCACAGAGAAGATTGCCCTCCTGCTTGAC
CCCCGCCTCAAGATGTGCCGGCCGGATACATGCCGCAATGGGGGCTCTGC
CCTTGCAGTCAGCGCGACAGAGACCCTCCAGTCGATCCTCAAAGAGCTCT
GCGGCTGGAACACAGAGGCCAGCAACAACAGCAGCAACTGCAACAGCGAC
AGCAAAAGCAACCCTCTTGTGCTGGAGCAGTCTCAGCCCCTGTGGCCAAC
CCCATTCTCCACTTCTCCTGTCATGGGAGCCTCGTT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10640:95..3330-

>mRNA_D-mesarthrocarpus_Contig10640.1.2 ID=mRNA_D-mesarthrocarpus_Contig10640.1.2|Name=mRNA_D-mesarthrocarpus_Contig10640.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1827bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10640:95..3330- (Discosporangium mesarthrocarpum MT17_79)
CCCAAGACCTCGTTGATATGGCAGGTTTTCGAGGAGGGTCCGCCGGACAA
AGAGGGTAGAAATGCTGTGTGTACGGTGCCTGTTGGTTCTACAGGGACCC
CGTGCGGTGCCCGGTTCAAGTATAACTCTGGTCACGGCACGAGTGCCTTG
ATGCGACATCTTCGAAATCAGCATATTCAGGCTTTCAATGAGGCCGAGTG
CTCAAAAAACCGAGGATCTGCGTCAACAACCGCAACCGGCTCGAGGGCGA
CAACAGCGGTGACAAGTGGACAGGGCAGTGGTGGTATTGGGGTTTCTTCA
ATCGCAGGACCAAGCCGTGCTGTCAATAGCTGCGGCTCGAGCAAGAAGCG
GAAGGAGGAGTGCGGTCGGTACGTGCTCATGTGCTGCATGGGAATGTTGC
CGCTGGACACGATGACCGAGCCGTGCTTCAGCCCACTTCTCGAGCATCTC
TCCCCCGGGTATTCCTGGAGATCTCTCTCCCCGGAGGAGGTCAACAAGCA
GTTCATCCACCTGTACGATGGACTCGTTGATGACATCACCCGCAGCCTGA
AATCCCATCACCAGTTATGCCAAAGGTTTGGGTACAAGGGCCCTTGTTTC
GGAGTCCAAGTGGGTCGCAGCAGGGGGTATGGGGCGGTGGAGTTCTGCAC
ACTGACGGTCTCCTTCATCCCGGCAGACTTCAGGGGGGTTGAGAGACTTG
CCCTGTCCATGAGGCCATTCTTTGACCCACCTGATGAGAGCGGGATGAAG
ACATGGATAAAACAGGTGACCGCAGAATGGTTTGGCTTCATGGGCAGCAG
CGTATGCCCCAGCGATGTCTACCTTTGTGCAACCACCAGGCAGGGGTGCA
GCAGCTCTGAGGCGTTTGAGGCATTGGGAGTTCCATTGATGGCGTGCAGC
GTGCACCGCCTGGGCTCATGTGTTGAGAGTGGGCTTGGGCTGACCTGGTC
ACCCGGTGGCGACCCCACCCAGAGCCCTGCCCAGGGTGCCGCTACCGGGG
CCAGCAAGAACCCAGAGATGGGAAGGATGGTGACCGCTGCAATGGATGAT
GCGGAGAAGTTTGTCCTCCTGGCTCCGGGATCCTTCACGCCGGGGGAGAT
GCAGGCTGACAGGGATAGGTTAGGGATGGTGCTGCACAGGCGCCATGTGT
ACGACACAAGGTGGACATCGGTGCACGCATCCCTTAACCTCATTATTCAT
CTCCAGCCAGCCCTGGACAGGTACTACAGCCACAACCAGGATGCCCACCC
TCAGGCCCCGGCCCCGGCCTCCACCAAGTGGCAGGCAATCCGGGAGGCAG
TGAGTGTGCTTGATGCCTCAGCAGAGGCTGGTGCCGTAATTGGTGGGGAG
AAAGGTGTCTTCATAGGCCAGGCCATCCGGACCATGCTTGACCTGCACAC
GGTGTTCAAGATGGATACCCAGGAGATCCGTGGCGGAGAGGGGAAGGTTG
ATGGTGGGGTGGTCCAGGAGACCGCGGTGAGCTCCCTTGCGGGGCCCACA
AGGGTGCTCCTGGGCACCCTGGATGCGGAAATGGTGCATCATGGCCTTGG
GGAGGCCAGGGGGGGCACAGAGAAGATTGCCCTCCTGCTTGACCCCCGCC
TCAAGATGTGCCGGCCGGATACATGCCGCAATGGGGGCTCTGCCCTTGCA
GTCAGCGCGACAGAGACCCTCCAGTCGATCCTCAAAGAGCTCTGCGGCTG
GAACACAGAGGCCAGCAACAACAGCAGCAACTGCAACAGCGACAGCAAAA
GCAACCCTCTTGTGCTGGAGCAGTCTCAGCCCCTGTGGCCAACCCCATTC
TCCACTTCTCCTGTCATGGGAGCCTCG
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