mRNA_D-mesarthrocarpus_Contig10633.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10633.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10633.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10633.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10633contigD-mesarthrocarpus_Contig10633:2162..3402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size943
Hectar predicted targeting categoryother localisation
Exons2
Cds size942
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789199.117155-CDS-D-mesarthrocarpus_Contig10633:2161..22611680789199.117155-CDS-D-mesarthrocarpus_Contig10633:2161..2261Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10633 2162..2261 +
1680789199.1323595-CDS-D-mesarthrocarpus_Contig10633:2559..34011680789199.1323595-CDS-D-mesarthrocarpus_Contig10633:2559..3401Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10633 2560..3401 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10633.3.1prot_D-mesarthrocarpus_Contig10633.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10633 2162..3401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10633.3.1

>prot_D-mesarthrocarpus_Contig10633.3.1 ID=prot_D-mesarthrocarpus_Contig10633.3.1|Name=mRNA_D-mesarthrocarpus_Contig10633.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=314bp
GGGGGVGLQSGGEEEEIEMETSGSRSSQMEKGADDPFAPGAKSPTLPELL
MVVVTNVIEEGGPNTYPILMRLFNHGVTVTASSQPHFQTSATMASTAAAT
MPDPKTEPSKSTGGRGGGGNNSPSLGAAPSQPVLPGTSTSTPGNGVCYTP
GVFQCAMLQHLATVCQTLLLPPPPSSTLLGSSGSLQSMRASGFLPGAMPL
RAGAGAGAGGLAAMAAVASAVADAGAKGLLPGTGTETLALTLLLGLLRQA
SSITMPMLAMPHPHDSAYRFGAAGLVDGGGPRAATAAAAVAARRTLLSAC
HVAAVVALRRTSRA
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mRNA from alignment at D-mesarthrocarpus_Contig10633:2162..3402+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10633.3.1 ID=mRNA_D-mesarthrocarpus_Contig10633.3.1|Name=mRNA_D-mesarthrocarpus_Contig10633.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1241bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10633:2162..3402+ (Discosporangium mesarthrocarpum MT17_79)
GGCGGTGGGGGTGGGGTAGGACTTCAGAGCGGGGGCGAGGAGGAGGAGAT
TGAGATGGAGACTTCAGGGAGCAGGTCAAGCCAAATGGAGAAGGGTGCAG
GTGAGGGTGAGGGCGCTTGGGATGGTGGAGAAGAAGGGAGGGGAAGGGAG
CAAGGATGGAATTGGAAATTGGAAAAATGAATGATCCGAGGTTTTTTTTT
TTGTCGGAGTGGCAGGTGTGAATCTGTGAGAGCCGTTCAGCTGCTTTGCT
CCTCCAAGTGTTTCCTTGTGCCGCTGGTCCCCTTACGGTCCAACGCTCTC
CCCCTGCCATGTCCCTCAGTATGCATCACCGCTCCCATTGACACCACCTG
CCTTGACCGTACCTCCTCTTTCCTCTCCCCAACCCTGACGGATTGCAGAT
GACCCCTTTGCCCCAGGGGCAAAATCCCCGACCTTGCCTGAGCTCCTGAT
GGTGGTGGTCACGAATGTTATAGAGGAGGGTGGGCCCAACACCTACCCTA
TCCTCATGCGTCTCTTCAACCATGGGGTCACTGTCACGGCCTCCAGCCAG
CCCCATTTCCAAACCTCAGCCACCATGGCCAGTACTGCTGCAGCCACAAT
GCCTGATCCCAAGACTGAGCCGAGCAAAAGCACTGGCGGCAGGGGTGGGG
GTGGCAACAACAGCCCCTCCTTGGGGGCAGCACCCTCCCAGCCTGTGCTT
CCGGGCACCAGCACTTCTACGCCTGGGAATGGTGTTTGCTATACCCCGGG
GGTCTTCCAGTGTGCCATGCTACAGCACCTGGCAACGGTGTGCCAGACCC
TTCTGCTGCCACCTCCACCCTCGTCCACCTTGCTTGGGAGTAGTGGCAGC
CTCCAGTCCATGCGGGCCAGCGGTTTCCTGCCGGGGGCAATGCCTCTCAG
GGCTGGGGCCGGAGCCGGGGCCGGGGGGCTGGCGGCCATGGCAGCCGTGG
CCTCAGCTGTGGCGGATGCTGGGGCCAAGGGGCTGCTCCCGGGCACGGGT
ACAGAAACCCTGGCCCTCACGTTGCTCCTGGGACTCCTGCGGCAGGCGTC
GTCCATAACTATGCCCATGCTTGCTATGCCCCACCCCCATGACAGTGCCT
ACCGGTTCGGGGCGGCTGGATTAGTGGATGGTGGCGGCCCTAGGGCAGCC
ACAGCAGCTGCAGCAGTGGCTGCCAGGAGAACTCTGCTCTCCGCCTGCCA
TGTAGCAGCCGTGGTAGCACTGCGGCGAACCTCGCGGGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10633:2162..3402+

>mRNA_D-mesarthrocarpus_Contig10633.3.1 ID=mRNA_D-mesarthrocarpus_Contig10633.3.1|Name=mRNA_D-mesarthrocarpus_Contig10633.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=942bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10633:2162..3402+ (Discosporangium mesarthrocarpum MT17_79)
GGCGGTGGGGGTGGGGTAGGACTTCAGAGCGGGGGCGAGGAGGAGGAGAT
TGAGATGGAGACTTCAGGGAGCAGGTCAAGCCAAATGGAGAAGGGTGCAG
ATGACCCCTTTGCCCCAGGGGCAAAATCCCCGACCTTGCCTGAGCTCCTG
ATGGTGGTGGTCACGAATGTTATAGAGGAGGGTGGGCCCAACACCTACCC
TATCCTCATGCGTCTCTTCAACCATGGGGTCACTGTCACGGCCTCCAGCC
AGCCCCATTTCCAAACCTCAGCCACCATGGCCAGTACTGCTGCAGCCACA
ATGCCTGATCCCAAGACTGAGCCGAGCAAAAGCACTGGCGGCAGGGGTGG
GGGTGGCAACAACAGCCCCTCCTTGGGGGCAGCACCCTCCCAGCCTGTGC
TTCCGGGCACCAGCACTTCTACGCCTGGGAATGGTGTTTGCTATACCCCG
GGGGTCTTCCAGTGTGCCATGCTACAGCACCTGGCAACGGTGTGCCAGAC
CCTTCTGCTGCCACCTCCACCCTCGTCCACCTTGCTTGGGAGTAGTGGCA
GCCTCCAGTCCATGCGGGCCAGCGGTTTCCTGCCGGGGGCAATGCCTCTC
AGGGCTGGGGCCGGAGCCGGGGCCGGGGGGCTGGCGGCCATGGCAGCCGT
GGCCTCAGCTGTGGCGGATGCTGGGGCCAAGGGGCTGCTCCCGGGCACGG
GTACAGAAACCCTGGCCCTCACGTTGCTCCTGGGACTCCTGCGGCAGGCG
TCGTCCATAACTATGCCCATGCTTGCTATGCCCCACCCCCATGACAGTGC
CTACCGGTTCGGGGCGGCTGGATTAGTGGATGGTGGCGGCCCTAGGGCAG
CCACAGCAGCTGCAGCAGTGGCTGCCAGGAGAACTCTGCTCTCCGCCTGC
CATGTAGCAGCCGTGGTAGCACTGCGGCGAACCTCGCGGGCA
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