mRNA_D-mesarthrocarpus_Contig10631.3.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 6.440e-15 Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 2
Query: 575 EIFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKEDWPWGGEGALQDGDLQVCMTTPAITEKHLPSFLQQ 898
+IFERRRKY V VWMSRHPELN YI +VL R K+++ +G+VRRV+ C F + +PVERV F++R DGD V T+ E L S L Q
Sbjct: 38 DIFERRRKYGVPVWMSRHPELNAYISEVLLRVKLLMEQGVVRRVLVCFFLEE--EHVDQAPVERVAFDVR-----------VDNDGDDSVDSTSLQDVEDQLRSALLQ 132
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: W7TK13_9STRA (Mad2 mitotic arrest deficient-like 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK13_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.940e-9 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEM 781
IFERRRKYDV V+MSRHP+LN YI +VL + M +G V +V+ ++ S + Q G +P+E FE+
Sbjct: 36 IFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGH-APLESFAFEL 102
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: A0A4D9CXK7_9STRA (HORMA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXK7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 7.310e-9 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEM 781
IFERRRKY+V V+MSRHP+LN YI +VL + M +G V +V+ ++ S + QGG +P+E FE+
Sbjct: 36 IFERRRKYEVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQGGH-APLESFAFEL 102
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: A0A835YLW3_9STRA (HORMA domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.270e-8 Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKEDWPWGGEGALQDGDLQVCMTTPAITE--KHLPSFLQQRVD*PS*IVPGIL-CTCSYILAC 964
+FERRR Y+V VWMSRHPELN+YI Q L+ ++ ++ + ++ RV C F G + E VFE++ +D P G +T A+TE HL + L +++ +P CT S ++ C
Sbjct: 50 MFERRRAYEVPVWMSRHPELNEYIAQALANARPLLVERLLHRVYLC-FKRENG-----AIEESFVFELQESDDAPAGP------------ITLDAVTELEAHLRAVLV-KINMSGAALPSREGCTFSLLIGC 162
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: UPI0009E3ED0F (mitotic spindle assembly checkpoint protein MAD2B-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3ED0F) HSP 1 Score: 62.8 bits (151), Expect = 1.470e-7 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKED 796
+FERR+KY+V V M HP+LN YI VL +K ++ KG V+RVV + + P+ER VFE+ N E+
Sbjct: 43 VFERRKKYNVPVQMCCHPDLNQYILDVLQTAKPLLEKGEVQRVVLVVSNKKF------IPIERFVFEIGNPEE 109
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: D1LX60_SACKO (MAD2B-like protein n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=D1LX60_SACKO) HSP 1 Score: 61.2 bits (147), Expect = 4.000e-7 Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEM 781
IFERR+KY+V V MS HPE+N YI VL K +I K + RVV + +SS PVER VFE+
Sbjct: 41 IFERRKKYNVPVQMSCHPEVNQYITNVLQSVKPLIVKDELHRVVLAVLNSSH------QPVERFVFEI 102
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: UPI00077A86D8 (mitotic spindle assembly checkpoint protein MAD2B-like isoform X1 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A86D8) HSP 1 Score: 60.1 bits (144), Expect = 4.390e-7 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKED 796
+FERR+KY+V V M HP+LN YI VL K ++ KG V+RV + + S Q P+ER VFE+ N E+
Sbjct: 41 VFERRKKYNVPVQMCCHPDLNQYILDVLQTIKPLLEKGDVQRV-SLVISDKKFQ-----PIERFVFEIGNLEE 107
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: UPI001CF57C0E (mitotic spindle assembly checkpoint protein MAD2B-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF57C0E) HSP 1 Score: 60.5 bits (145), Expect = 8.340e-7 Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKEDWPWGGEGALQDGDLQVCMTTPAITEKHLPSFL 892
+FERR+KY+V V M HP+LN YI VL K ++ KG V+RV + + S Q P+ER VFE+ N E+ +Q D + T EK L FL
Sbjct: 41 VFERRKKYNVPVQMCCHPDLNQYILDVLQTIKPLLEKGDVQRV-SLVISDKKFQ-----PIERFVFEIGNLEE-----TSRVQSDDNFLLHT-----EKSLRGFL 129
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: A0A0K3CI01_RHOTO (BY PROTMAP: gi|472580895|gb|EMS18662.1| mitotic spindle assembly checkpoint protein MAD2B [Rhodosporidium toruloides NP11] gi|647403459|emb|CDR49573.1| RHTO0S28e00738g1_1 [Rhodosporidium toruloides] n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CI01_RHOTO) HSP 1 Score: 60.8 bits (146), Expect = 1.040e-6 Identity = 39/147 (26.53%), Postives = 70/147 (47.62%), Query Frame = 2
Query: 491 ILMQPTCRLPRGSLPTLKHGC--VECAFFLEIFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMR---NKEDWPWGGEG------ALQDGDLQVCMTTPAITEKHLPSFLQQ 898
+ + T +L R L H + + ++F +KY++ +W SRHP LN+Y+ ++L + + KG +RRV + AG T P+ER +FE + D P G+ L +GD++ + + H S+L++
Sbjct: 5 LTFRETVKLVRDYLEVALHTLLYIRQIYPAQLFAEVKKYNIPIWQSRHPMLNEYLGRILECVQEEMEKGTIRRVNFVV--KEAGPEET--PLERFIFEFEWLIPERDMPKAGDDFTPASHGLAEGDVEELLRACLLKLNHSSSYLRR 147
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Match: A0A3M6UFX0_POCDA (HORMA domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UFX0_POCDA) HSP 1 Score: 59.7 bits (143), Expect = 1.540e-6 Identity = 37/96 (38.54%), Postives = 49/96 (51.04%), Query Frame = 2
Query: 578 IFERRRKYDVSVWMSRHPELNDYICQVLSRSKVMISKGIVRRVVACIFSSSAGQGGTCSPVERVVFEMRNKEDWPWGGEGALQDGDLQVCMTTPAI 865
+FERR+KY+V V M HP+LN YI VL K ++ +G V+RV I PVER VFE+ N E G G + D + T A+
Sbjct: 41 VFERRKKYNVPVQMCCHPDLNQYILDVLHTMKPLLEEGKVQRVALVISDKKF------IPVERFVFEVGNPE-----GVGTTESPDNFLLSTERAL 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10631.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10631.3.2 >prot_D-mesarthrocarpus_Contig10631.3.2 ID=prot_D-mesarthrocarpus_Contig10631.3.2|Name=mRNA_D-mesarthrocarpus_Contig10631.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=138bp MQPTCRLPRGSLPTLKHGCVECAFFLEIFERRRKYDVSVWMSRHPELNDYback to top mRNA from alignment at D-mesarthrocarpus_Contig10631:2364..4198+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10631.3.2 ID=mRNA_D-mesarthrocarpus_Contig10631.3.2|Name=mRNA_D-mesarthrocarpus_Contig10631.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1835bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10631:2364..4198+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10631:2364..4198+ >mRNA_D-mesarthrocarpus_Contig10631.3.2 ID=mRNA_D-mesarthrocarpus_Contig10631.3.2|Name=mRNA_D-mesarthrocarpus_Contig10631.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=414bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10631:2364..4198+ (Discosporangium mesarthrocarpum MT17_79)back to top |