mRNA_D-mesarthrocarpus_Contig1063.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 70.5 bits (171), Expect = 3.140e-10 Identity = 60/176 (34.09%), Postives = 81/176 (46.02%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWP-YDLHW--------GVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRL-PGHTIFVQQDGPKPH 492
+KP L+ E + RV F SH R+ EV+ DM+D V DE WF D YL E +P R + S + + AVA P YD H G+ + + Y A S G L+ + E YK +I ++IPAIKA+ PR TI++QQD KPH
Sbjct: 33 VKPALTEENRLARVQFELSHTTRKRGGEVVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRN------VESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPH 202
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.410e-10 Identity = 55/189 (29.10%), Postives = 86/189 (45.50%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWPYDLHWGVVQW*DRYLA---YCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGHTIFVQQDGPKPHT---GKGVMEAIQ-DAWEMT 540
++PLL+ RV +V H+H ++ DDM + V DE WF+ K +YL P E P ++ + + AVA P + V W D + + E E + G + + Y+K++I+ VIPAIKA+ PR I +QQD +PH ++EA D W+M+
Sbjct: 76 VRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRTCKSKRYITKVMFLSAVARPRWVD-DEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWPRNSSRCITIQQDNARPHVPPLDARIVEACHSDRWDMS 263
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 68.6 bits (166), Expect = 1.870e-9 Identity = 59/176 (33.52%), Postives = 80/176 (45.45%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWP-YDLHW--------GVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRL-PGHTIFVQQDGPKPH 492
+KP L+ E + RV F SH R+ E++ DM+D V DE WF D YL E +P R + S + + AVA P YD H G+ + + Y A S G L+ + E YK I ++IPAIKA+ PR TI++QQD KPH
Sbjct: 129 VKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRN------VESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPH 298
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.160e-7 Identity = 48/171 (28.07%), Postives = 77/171 (45.03%), Query Frame = 1
Query: 4 KPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWPYDLHWGV--VQW*DRYLAYCESCAGEGGQQKL---QEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGHT-IFVQQDGPKPH 492
KPLL+ + + RV+++ H+ G DD + W+ DE WFY+ + YL P E +P H + + A A P W W D + E ++ +G + + GE YK++++E+V+PAI + PR IF+Q+D KPH
Sbjct: 234 KPLLTAKNKLKRVEWILEHIDDNGR----FDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSKSKNHMTKVMFLCATARP---RWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPH 397
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: W2QKX2_PHYPN (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QKX2_PHYPN) HSP 1 Score: 60.5 bits (145), Expect = 8.750e-7 Identity = 55/168 (32.74%), Postives = 75/168 (44.64%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWP-YDLHWGVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRL-PGHTIFVQQDGPKPH 492
+KP L+ E + RV F SH R+ E++ DM+D V DE F D YL E +P R + + + AVA P YD H Q D + G L+ + E YK +I ++IPAIKA+ PR TI++QQD KPH
Sbjct: 129 VKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKRFNEDTDRKCYYLDANEEEPVRQRQSKRFICKTMFIAAVARPRYDAH--RKQAFDGTIGIWAFAEEPKGIIVLRN------VESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPH 288
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI) HSP 1 Score: 59.3 bits (142), Expect = 1.780e-6 Identity = 52/182 (28.57%), Postives = 85/182 (46.70%), Query Frame = 1
Query: 4 KPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYL------PPKENKP*PLRAQNKH*SPSTYSLAVAWP---YDLHWGVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGH--------TIFVQQDGPKPH 492
+PLL+ + +R+ + H+ + + + MYD V DE WFYV K G VYL P E+ P +H + AVA P +D G+ ++Y+ S + G ++L+ + E+ Y+++++E+VIPAIKA+ + I+VQQD KPH
Sbjct: 19 RPLLTEKHKTDRLKWCLLHVTQSTDRQPVFAPMYDTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARPRGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREV-------YRRMLLEDVIPAIKAKWEWVRDEGLGVPLVSPIWVQQDNAKPH 193
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A6A3XBC6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XBC6_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 5.190e-6 Identity = 48/175 (27.43%), Postives = 81/175 (46.29%), Query Frame = 1
Query: 4 KPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYL------PPKENKP*PLRAQNKH*SPSTYSLAVAWP---YDLHWGVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGHTIF-VQQDGPKPH 492
+PLL+ + R+ F +H+ G + D M+D V DE WFYV K G VY+ P E P +H + AVA P +D G+ + Y+ S G ++++ + + + +++++ +VIPAIKA+ P+ T+ +QQD +PH
Sbjct: 72 RPLLTASHRVARLKFAVNHVKLNGDGQYYFDPMFDVVHIDEKWFYVKKIGQRVYVLTGKDGTPLEEAPVQYVQSKRHIKKVMFLCAVARPRGDWDGKIGLWPVVETYITQRWSVNRPAGVEEIKPVSMNRTLA-------RRMLVTDVIPAIKAKWPQDQKATLIRIQQDNARPH 239
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 5.610e-6 Identity = 54/195 (27.69%), Postives = 80/195 (41.03%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSLAVAWP---------YDLHWGVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGHTIFVQQDGPKPHTGKG----VMEAIQDAWEMT 540
+KP L+ RV + +H +E+ DMYD+V DE WF + + YL P E P + + + AVA P +D G + + A S G +L+ N I YKK++I+ VIPAIKA+ P ++ +QQD +PH V D W M+
Sbjct: 149 VKPKLTDVNKTARVKWAMDFVHP---TELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRTTQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPI-------YKKMLIDNVIPAIKAKWPAESSRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMS 333
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A6A4Z6I9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6I9_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 2.280e-5 Identity = 57/176 (32.39%), Postives = 79/176 (44.89%), Query Frame = 1
Query: 1 IKPLLSHEQNINRVDFVWSHMHRRGLSEVLVDDMYDWV--DETWFYVMKDGTGVYLPPKENKP*PLRAQNKH*SPSTYSL-AVAWP---------YDLHWGVVQW*DRYLAYCESCAGEGGQQKLQEGNSDHEINHGQGERYKKLMIEEVIPAIKARMPRLPGHTIFVQQDGPKPH 492
IKP L+ + RV+ W+ R S DM+D+V DE WF+ K + VYL P E P Q+KH L AVA P +D G + A S G +L+ + I YKK+++E VIPAIKA+ P+ +I +QQD +PH
Sbjct: 132 IKPKLTDVNKVARVN--WAMKFVRPDSNFQFADMFDYVHVDEKWFHATKIKSRVYLLPGEVPP-HRSTQSKHFITKVMFLSAVARPRWDDAKSEWFDGKIGTWHFTQVVPAARSSRNRPAGTLELRPVSVTRPI-------YKKMLLENVIPAIKAKWPQDSTRSIVIQQDNARPH 297
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Match: A0A484NKB5_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NKB5_9ASTE) HSP 1 Score: 55.1 bits (131), Expect = 4.470e-5 Identity = 35/96 (36.46%), Postives = 48/96 (50.00%), Query Frame = 3
Query: 552 PDLNANDLGF--STPSWSDQWQGAGGGRHREIRRLSLVGTRTSLAEPFC--SLW--------KVMRCKGDNSYKIPHLGKEKLARAGNLPKTAQVD 803
PDLN DLGF + S DQ + + V + P C +W KVM +G+N+YK+PH+GK++LAR GNLPK +D
Sbjct: 207 PDLNVLDLGFFRAIQSLKDQCAPT-----TVVELIEAVEGAYNALSPECLNKVWLSYQQVMTKVMEHEGNNNYKLPHMGKDRLAREGNLPKCLNID 297 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1063.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1063.3.1 >prot_D-mesarthrocarpus_Contig1063.3.1 ID=prot_D-mesarthrocarpus_Contig1063.3.1|Name=mRNA_D-mesarthrocarpus_Contig1063.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=100bp MHWKPDLNANDLGFSTPSWSDQWQGAGGGRHREIRRLSLVGTRTSLAEPFback to top mRNA from alignment at D-mesarthrocarpus_Contig1063:2226..3064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1063.3.1 ID=mRNA_D-mesarthrocarpus_Contig1063.3.1|Name=mRNA_D-mesarthrocarpus_Contig1063.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=839bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1063:2226..3064+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1063:2226..3064+ >mRNA_D-mesarthrocarpus_Contig1063.3.1 ID=mRNA_D-mesarthrocarpus_Contig1063.3.1|Name=mRNA_D-mesarthrocarpus_Contig1063.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=300bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1063:2226..3064+ (Discosporangium mesarthrocarpum MT17_79)back to top |