mRNA_D-mesarthrocarpus_Contig10624.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A349E9I8_9GAMM (Acyl-CoA thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349E9I8_9GAMM) HSP 1 Score: 155 bits (392), Expect = 2.380e-46 Identity = 71/115 (61.74%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAVSRP 345
CYVVWCE CAW HS++LGLTVADYQRLDRGVAI++A Y Y P+ + L IGTW+T CD +LR+ERRFQ+ GKTVLRGHW +I + ++SGK R P EFI +YG AV P
Sbjct: 35 CYVVWCEQCAWSHSQSLGLTVADYQRLDRGVAIRKASYEYCLPTFENEALRIGTWITACDRKLRMERRFQMINFATGKTVLRGHWQVICVTLSSGKATRLPSEFIEAYGNAVIAP 149
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A2E8F7K4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8F7K4_9GAMM) HSP 1 Score: 152 bits (383), Expect = 4.340e-45 Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CYVVWCE CAW+HS LGL +ADYQRLDRGVAI + +Y+Y PS ++L++GTWLT CD +LRLER FQ ++ G TV+RG W LI + +++GKP+RFP EF+ SY AV
Sbjct: 30 CYVVWCEQCAWKHSELLGLNIADYQRLDRGVAINKXDYDYFLPSFNREELIVGTWLTACDEKLRLERSFQTINRETGATVMRGSWQLICVTLSTGKPSRFPQEFLDSYATAV 141
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A2E9ZI44_9GAMM (Acyl-CoA thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZI44_9GAMM) HSP 1 Score: 151 bits (382), Expect = 6.550e-45 Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CYVVWCEACAW+HS LGL++ DYQ L+RGVAI +A Y Y PS G++L+ GTWLT CDN+LRLERRFQ+ G TVLRG W LI + ++SGK +RFP +FI YG AV
Sbjct: 30 CYVVWCEACAWKHSEELGLSLNDYQILNRGVAIHKARYEYFLPSFEGERLIAGTWLTACDNKLRLERRFQVLNPRTGNTVLRGQWQLICVTLSSGKASRFPDKFIDIYGGAV 141
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A2A5AGW9_9GAMM (Thioesterase n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5AGW9_9GAMM) HSP 1 Score: 151 bits (381), Expect = 9.010e-45 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CYV+WCE CAW HS LGL+V DYQRLDRGVAI +A+Y Y PS ++L++GTWL CD +LRLER+FQ+ D +TVLRGHW LI +++ SGK AR P EFI YG+AV
Sbjct: 31 CYVIWCEQCAWSHSETLGLSVKDYQRLDRGVAIHKAQYEYFLPSFKDEKLMVGTWLIACDQKLRLERKFQMINLDTQETVLRGHWQLICVSLKSGKAARLPKEFIDIYGSAV 142
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A2A4WSR2_9GAMM (Thioesterase n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4WSR2_9GAMM) HSP 1 Score: 145 bits (366), Expect = 1.830e-42 Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CYVVWCE CAW HS LGL++ DYQRLDRGVAI++A Y Y P+ + L+I TWLT CD + RLERRFQ+ G+TV RGHW LI I ++SGK +FP EFI YG+AV
Sbjct: 30 CYVVWCEQCAWNHSEFLGLSLKDYQRLDRGVAIRKASYEYFLPAFENEDLLIATWLTACDGKFRLERRFQMINLATGQTVQRGHWELICITLSSGKVMKFPNEFIERYGSAV 141
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A359GTE8_9GAMM (Acyl-CoA thioesterase n=4 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A359GTE8_9GAMM) HSP 1 Score: 145 bits (366), Expect = 2.410e-42 Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CY +WCE CAW+HS LGLT+ DYQRLDRGV + +A YNY P+ +QL+I TWLT CD +LRLERRFQ+ +T+++ HWL+I +++GKPARFP +FI YG+A+
Sbjct: 39 CYAIWCENCAWKHSEDLGLTLQDYQRLDRGVVVHKASYNYLLPAFENNQLMIATWLTNCDYKLRLERRFQVINLQTKQTLMKAHWLMICTVLSTGKPARFPSKFIEVYGSAI 150
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A3C0P6V9_9GAMM (Acyl-CoA thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0P6V9_9GAMM) HSP 1 Score: 143 bits (361), Expect = 1.120e-41 Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 1 CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
CYVVWCE CAW+HS ALGL+V DYQRLDRGV+I RA Y Y PS D L I TWLT CD +LRLER FQI +TVLRG W LI +++GK R P EF+ +YGAAV
Sbjct: 30 CYVVWCEDCAWKHSEALGLSVEDYQRLDRGVSIHRANYEYLLPSFENDSLTIATWLTDCDCKLRLERSFQIINTATEQTVLRGSWQLICTALSTGKAVRLPQEFLNTYGAAV 141
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A6I3SVQ8_9BURK (Acyl-CoA thioesterase n=1 Tax=Massilia buxea TaxID=1949069 RepID=A0A6I3SVQ8_9BURK) HSP 1 Score: 141 bits (356), Expect = 6.630e-41 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 4 YVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
YV WCE W HS ALGL +ADYQRLDR +AIQRAEY+Y P+ GD+L++GTWL D RL +ERRFQ+ R +G TV+RG W L+ I++ SGKP R PPEF A+Y AV
Sbjct: 31 YVRWCELAGWSHSEALGLDLADYQRLDRAMAIQRAEYDYLLPTGAGDELLLGTWLCATDGRLAMERRFQLLRAADGATVMRGRWQLVCIDIASGKPRRMPPEFCAAYLPAV 141
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A519IEK8_9BURK (Acyl-CoA thioesterase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519IEK8_9BURK) HSP 1 Score: 139 bits (349), Expect = 6.800e-40 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 4 YVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAVSR 342
YV WCE W HS ALGL++ DY+RLDR +AI+ Y+Y PS G+ LV+ TWLTG D +L +ERRFQ+RR +G T++RG W+L+ I++++GKP R PPEF+A+Y AV R
Sbjct: 32 YVQWCEQAGWAHSEALGLSLDDYRRLDRAMAIREGHYDYLLPSFEGEALVLATWLTGSDGKLTMERRFQLRRASDGATLVRGRWVLVCIDISTGKPRRMPPEFLATYEGAVVR 144
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Match: A0A520BQR7_9BURK (Acyl-CoA thioesterase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A520BQR7_9BURK) HSP 1 Score: 138 bits (347), Expect = 1.590e-39 Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 4 YVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLVIGTWLTGCDNRLRLERRFQIRRQDNGKTVLRGHWLLIGINMTSGKPARFPPEFIASYGAAV 336
YV WCE W HS ALGL++ADY+RLDR +AI+ Y+Y PS G+ L++GTWLT D RL +ERRFQ+RR +G T++RG WLL+ I + SG+P R PPEF+++Y +A+
Sbjct: 34 YVQWCEQAGWAHSEALGLSLADYRRLDRAMAIREGHYDYLLPSFEGEALLLGTWLTASDGRLTMERRFQLRRVSDGATLVRGRWLLVCIEIASGRPKRMPPEFLSAYESAL 144 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10624.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10624.4.1 >prot_D-mesarthrocarpus_Contig10624.4.1 ID=prot_D-mesarthrocarpus_Contig10624.4.1|Name=mRNA_D-mesarthrocarpus_Contig10624.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=119bp CYVVWCEACAWEHSRALGLTVADYQRLDRGVAIQRAEYNYTQPSLVGDQLback to top mRNA from alignment at D-mesarthrocarpus_Contig10624:3850..4206- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10624.4.1 ID=mRNA_D-mesarthrocarpus_Contig10624.4.1|Name=mRNA_D-mesarthrocarpus_Contig10624.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=357bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10624:3850..4206- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10624:3850..4206- >mRNA_D-mesarthrocarpus_Contig10624.4.1 ID=mRNA_D-mesarthrocarpus_Contig10624.4.1|Name=mRNA_D-mesarthrocarpus_Contig10624.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=357bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10624:3850..4206- (Discosporangium mesarthrocarpum MT17_79)back to top |